| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yffB [H]
Identifier: 186476108
GI number: 186476108
Start: 1516643
End: 1517014
Strand: Direct
Name: yffB [H]
Synonym: Bphy_1350
Alternate gene names: 186476108
Gene position: 1516643-1517014 (Clockwise)
Preceding gene: 186476107
Following gene: 186476109
Centisome position: 43.59
GC content: 62.63
Gene sequence:
>372_bases ATGGCGCGCGCTTCGTCGAAGACGACCGTCGTCTACGGCATTCCGAACTGCGACTCCGTGAAGAAGGCCCGTGTGTGGCT GGAAGAGCACGGCGTCGAGTTCGAGTTTCACGACTTCAAGAAGGCGGGCGTGTCGAATGCGCTGGTGCAGGACTGGCTGA AGGACGTGCCGCTGGAGCAGCTCATCAACAAGCGCGGCACCACGTGGCGCGGCCTGTCCGACGTGCACAAGGCGGAAGCC GACACCACGGCAGGCGCGATTGCGCTGATGATCCACAAGCCGTCGATCATCAAGCGACCCGTGCTGGTCGTGAACGGGCG CGTGAAAACGCTGGGCTTCTCCGCAGAGCAATACGAAACGCTGTTCGCCTGA
Upstream 100 bases:
>100_bases AGGACGGTTCGCACAGCCTGTATTGCGCCGTGATCGTCAAGAAGGTCGACGCCAAGACGCGCGCAAAGGTCGGTCTGAAC GAACTGCTGCGAGGCGACTG
Downstream 100 bases:
>100_bases ACGGGCGGGCGTATCACGCTCGCCAGCCGTACCTATGTTGTTGCCGGCCTTCCTGGGCCGGCATTTTTTCACCTGAGTTT GGAACTGCATCGATGTCCGG
Product: arsenate reductase and related
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MARASSKTTVVYGIPNCDSVKKARVWLEEHGVEFEFHDFKKAGVSNALVQDWLKDVPLEQLINKRGTTWRGLSDVHKAEA DTTAGAIALMIHKPSIIKRPVLVVNGRVKTLGFSAEQYETLFA
Sequences:
>Translated_123_residues MARASSKTTVVYGIPNCDSVKKARVWLEEHGVEFEFHDFKKAGVSNALVQDWLKDVPLEQLINKRGTTWRGLSDVHKAEA DTTAGAIALMIHKPSIIKRPVLVVNGRVKTLGFSAEQYETLFA >Mature_122_residues ARASSKTTVVYGIPNCDSVKKARVWLEEHGVEFEFHDFKKAGVSNALVQDWLKDVPLEQLINKRGTTWRGLSDVHKAEAD TTAGAIALMIHKPSIIKRPVLVVNGRVKTLGFSAEQYETLFA
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788815, Length=113, Percent_Identity=43.3628318584071, Blast_Score=113, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 - InterPro: IPR006504 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 13680; Mature: 13549
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARASSKTTVVYGIPNCDSVKKARVWLEEHGVEFEFHDFKKAGVSNALVQDWLKDVPLEQ CCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEHHHHHCCCCHHHHHHHHHCCCHHH LINKRGTTWRGLSDVHKAEADTTAGAIALMIHKPSIIKRPVLVVNGRVKTLGFSAEQYET HHHCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCHHHCCEEEECCEEEEECCCHHHHHH LFA HCC >Mature Secondary Structure ARASSKTTVVYGIPNCDSVKKARVWLEEHGVEFEFHDFKKAGVSNALVQDWLKDVPLEQ CCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEHHHHHCCCCHHHHHHHHHCCCHHH LINKRGTTWRGLSDVHKAEADTTAGAIALMIHKPSIIKRPVLVVNGRVKTLGFSAEQYET HHHCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCHHHCCEEEECCEEEEECCCHHHHHH LFA HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1644752; 9205837; 9278503; 10493123 [H]