Click here to switch to the map view.

The map label for this gene is 186476068

Identifier: 186476068

GI number: 186476068

Start: 1468019

End: 1469491

Strand: Direct

Name: 186476068

Synonym: Bphy_1310

Alternate gene names: NA

Gene position: 1468019-1469491 (Clockwise)

Preceding gene: 186476067

Following gene: 186476069

Centisome position: 42.19

GC content: 66.46

Gene sequence:

>1473_bases
ATGCATGTCACGACCATCGAGGACACGTTCGCCGCGTGGCGCGAAGCGGCCCGGCAGGCGCTCGCGCAGCGTGTTGCGCC
CGAGGAGATCGACTGGCGCATTCGCGACGGCGCGCGTGCCGCCCCTAGCACGCTGTTCGACGATAAATCCGCTACCCCGT
TTGAGTCGGCGGTGTGCGTCGAAGTCCTCATATCGCGCGAACTCGCTGAACTGCTGAACGACGCCGCGCTGTATCGCGCA
CCGGGCCGCTGGGCGTTTCTCTATCGCGTGCTCTGGCGATGGCATGGCGGCGACCGTTCGGTCGCGTCCCCCGCGGATTC
CGACGGTGCCCGGCTTCACAAGATGGCGAAGGCCGTGCGGCGCGCGAAACACGACATGATCGCGTACCTGCGCTTTCGGC
TGCGTGATGCGAGCCACGACACGCCCACACCCGACCTGCCCGAATACGTCGCGTGGTACGAACCGGAACACGATGTGCTC
GCATGGTCGGCCGAACACTTCGCGCGGCGCATGGGTCGTTCGACGTGGCTCATCTCGACGCCCGACGGCGCCGCATGGTG
GGACGGCAGCGCGCTGCGGGTTGAACGTCGCCGGGCGCCGTCCGCCGACCTTGCCTGCACCACCGCCGACGAAGCCGAGA
GACTCTGGCTCGCCTACTATCGCAACACGTTCAATCCCGCGCGCCTGAACGAAACCGCGCTCGAGCAGCATATGCCTGTG
CGTTTCTGGAAGGGCTTGCCCGAGGGCCGTCTGATTCCGTCGCTGATCAGCGAAGCGAAAAGCGGCGCGCAGCGGGTCGC
ACAGGCGAGCAGCGTGGGCATGCTCGGCGGCAAGAGCGTGTCCGTCGATGCACACAGCGCGCAACCCATGCGGCAACACC
TTTCGACGCTCGACGCGTGCCGGCACTGCGAACTGTGGCAGCATGCGACGCAGGCCGTCGACGGCATCGGCCCCGACGAC
GCGCGCATCATGCTGATCGGCGAACAACCCGGCGATCACGAAGATCTCGCAGGAAAACCGTTCGTCGGACCGGCAGGCCG
GCTACTCGATGTGGCACTCCAGCGCGCGGGTCTGTCGCGTGACGGTCTTTATTTGACCAACGCCGTCAAGCACTTCAAAT
GGACGCTGCGCGGCAAGCGGCGTCTGCACAAGACAGCGGCGCAGCAGGAAATCGACGCTTGCGGCTATTGGCTGGAACGC
GAACTGCAACGCGTGAGGCCTGCCGTCGTCGTCACGCTGGGCGCGACCGCGTTGAGCGCGCTGCTGCACGAGAAGGTCAA
CCTGAGCGATTGGACGGGCAGAACGCTCAATGTGGACGACATGCGGGTGGTCGCGACGTATCATCCGTCGTATGCGTTGC
GGCAGCAGCATGACGAGGCCCGCGAGCGGGTGCTGGCAGCGATCATCGGGGCGCTGACGCGGGCGCGCGACCTGTCCGAA
GCTGTAGGGGAAAGGCAGCACGCGCCGGACTAG

Upstream 100 bases:

>100_bases
TATCGTCCGGCGCAGGCCGACCTGTCGACAGAACGGTTGCGGCACGCGTTGACGCGACCGCCCACGCAGTTGTCGCTGTT
GTAACGCACCGCGTTCGCAC

Downstream 100 bases:

>100_bases
CATCGCGACCGCGAATGCGCGAGCATGGACAAATGCCATGAACGAGACGTCATGCAAATCCAGCTCGAAACTGCGCGTCT
GCGGCTCGAACCGTTCTGTG

Product: phage SPO1 DNA polymerase-like protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage SPO1 DNA Polymerase-Like Protein; Uracil-DNA Glycosylase Superfamily; Uracil DNA Glycosylase Superfamily Protein; DNA Polymerase Bacteriophage-Type; DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; DNA-Directed DNA Polymerase Protein; Uracil-DNA Glycosylase Family 4 Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase; Helicase/Glycosylase; Phage SPO1 DNA Polymerase Domain-Containing Protein; Phage SpO1 DNA Polymerase-Related Protein; Uracil DNA Glycosylase Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; Uracil DNA Glycosylase; DNA-Directed DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase-Related Protein; Uracil DNA Glycosylase Superfamily; Uracil-DNA Glycosylase Phage-Related Protein; Phage DNA Polymerase; Phage SPO1 DNA Polymerase; DNA Polymerase-Related Protein; Uracil-DNA Glycosylase-Like Protein; Uracil DNA Glycosylase Family Protein; Transcriptional Regulator Fis Family; Uracil-DNA Glycosylase-Related Protein; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein; Leucyl-TRNA Synthetase

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MHVTTIEDTFAAWREAARQALAQRVAPEEIDWRIRDGARAAPSTLFDDKSATPFESAVCVEVLISRELAELLNDAALYRA
PGRWAFLYRVLWRWHGGDRSVASPADSDGARLHKMAKAVRRAKHDMIAYLRFRLRDASHDTPTPDLPEYVAWYEPEHDVL
AWSAEHFARRMGRSTWLISTPDGAAWWDGSALRVERRRAPSADLACTTADEAERLWLAYYRNTFNPARLNETALEQHMPV
RFWKGLPEGRLIPSLISEAKSGAQRVAQASSVGMLGGKSVSVDAHSAQPMRQHLSTLDACRHCELWQHATQAVDGIGPDD
ARIMLIGEQPGDHEDLAGKPFVGPAGRLLDVALQRAGLSRDGLYLTNAVKHFKWTLRGKRRLHKTAAQQEIDACGYWLER
ELQRVRPAVVVTLGATALSALLHEKVNLSDWTGRTLNVDDMRVVATYHPSYALRQQHDEARERVLAAIIGALTRARDLSE
AVGERQHAPD

Sequences:

>Translated_490_residues
MHVTTIEDTFAAWREAARQALAQRVAPEEIDWRIRDGARAAPSTLFDDKSATPFESAVCVEVLISRELAELLNDAALYRA
PGRWAFLYRVLWRWHGGDRSVASPADSDGARLHKMAKAVRRAKHDMIAYLRFRLRDASHDTPTPDLPEYVAWYEPEHDVL
AWSAEHFARRMGRSTWLISTPDGAAWWDGSALRVERRRAPSADLACTTADEAERLWLAYYRNTFNPARLNETALEQHMPV
RFWKGLPEGRLIPSLISEAKSGAQRVAQASSVGMLGGKSVSVDAHSAQPMRQHLSTLDACRHCELWQHATQAVDGIGPDD
ARIMLIGEQPGDHEDLAGKPFVGPAGRLLDVALQRAGLSRDGLYLTNAVKHFKWTLRGKRRLHKTAAQQEIDACGYWLER
ELQRVRPAVVVTLGATALSALLHEKVNLSDWTGRTLNVDDMRVVATYHPSYALRQQHDEARERVLAAIIGALTRARDLSE
AVGERQHAPD
>Mature_490_residues
MHVTTIEDTFAAWREAARQALAQRVAPEEIDWRIRDGARAAPSTLFDDKSATPFESAVCVEVLISRELAELLNDAALYRA
PGRWAFLYRVLWRWHGGDRSVASPADSDGARLHKMAKAVRRAKHDMIAYLRFRLRDASHDTPTPDLPEYVAWYEPEHDVL
AWSAEHFARRMGRSTWLISTPDGAAWWDGSALRVERRRAPSADLACTTADEAERLWLAYYRNTFNPARLNETALEQHMPV
RFWKGLPEGRLIPSLISEAKSGAQRVAQASSVGMLGGKSVSVDAHSAQPMRQHLSTLDACRHCELWQHATQAVDGIGPDD
ARIMLIGEQPGDHEDLAGKPFVGPAGRLLDVALQRAGLSRDGLYLTNAVKHFKWTLRGKRRLHKTAAQQEIDACGYWLER
ELQRVRPAVVVTLGATALSALLHEKVNLSDWTGRTLNVDDMRVVATYHPSYALRQQHDEARERVLAAIIGALTRARDLSE
AVGERQHAPD

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 54891; Mature: 54891

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVTTIEDTFAAWREAARQALAQRVAPEEIDWRIRDGARAAPSTLFDDKSATPFESAVCV
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCEEECCCCCCCCCHHCCCCCCCCHHHHHHH
EVLISRELAELLNDAALYRAPGRWAFLYRVLWRWHGGDRSVASPADSDGARLHKMAKAVR
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
RAKHDMIAYLRFRLRDASHDTPTPDLPEYVAWYEPEHDVLAWSAEHFARRMGRSTWLIST
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCEEECHHHHHHHCCCCEEEEEC
PDGAAWWDGSALRVERRRAPSADLACTTADEAERLWLAYYRNTFNPARLNETALEQHMPV
CCCCCEECCCCEEEHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHCCHHHHHHCCCH
RFWKGLPEGRLIPSLISEAKSGAQRVAQASSVGMLGGKSVSVDAHSAQPMRQHLSTLDAC
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHH
RHCELWQHATQAVDGIGPDDARIMLIGEQPGDHEDLAGKPFVGPAGRLLDVALQRAGLSR
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
DGLYLTNAVKHFKWTLRGKRRLHKTAAQQEIDACGYWLERELQRVRPAVVVTLGATALSA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHH
LLHEKVNLSDWTGRTLNVDDMRVVATYHPSYALRQQHDEARERVLAAIIGALTRARDLSE
HHHHCCCCCCCCCCEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVGERQHAPD
HHHHCCCCCC
>Mature Secondary Structure
MHVTTIEDTFAAWREAARQALAQRVAPEEIDWRIRDGARAAPSTLFDDKSATPFESAVCV
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCEEECCCCCCCCCHHCCCCCCCCHHHHHHH
EVLISRELAELLNDAALYRAPGRWAFLYRVLWRWHGGDRSVASPADSDGARLHKMAKAVR
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
RAKHDMIAYLRFRLRDASHDTPTPDLPEYVAWYEPEHDVLAWSAEHFARRMGRSTWLIST
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCEEECHHHHHHHCCCCEEEEEC
PDGAAWWDGSALRVERRRAPSADLACTTADEAERLWLAYYRNTFNPARLNETALEQHMPV
CCCCCEECCCCEEEHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHCCHHHHHHCCCH
RFWKGLPEGRLIPSLISEAKSGAQRVAQASSVGMLGGKSVSVDAHSAQPMRQHLSTLDAC
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHH
RHCELWQHATQAVDGIGPDDARIMLIGEQPGDHEDLAGKPFVGPAGRLLDVALQRAGLSR
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
DGLYLTNAVKHFKWTLRGKRRLHKTAAQQEIDACGYWLERELQRVRPAVVVTLGATALSA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHH
LLHEKVNLSDWTGRTLNVDDMRVVATYHPSYALRQQHDEARERVLAAIIGALTRARDLSE
HHHHCCCCCCCCCCEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVGERQHAPD
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA