Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476018

Identifier: 186476018

GI number: 186476018

Start: 1410547

End: 1411884

Strand: Direct

Name: 186476018

Synonym: Bphy_1259

Alternate gene names: NA

Gene position: 1410547-1411884 (Clockwise)

Preceding gene: 186476017

Following gene: 186476019

Centisome position: 40.54

GC content: 64.2

Gene sequence:

>1338_bases
ATGAGCAAACCGTCCATCGATGCCGTCCGCCGCGACCATGCGGGCTGGATCTTCGTGCACATCCAGGGTGAGCCATACGA
CCGCGGCGAACAGCACGGCCAGTTGCTCGCCGCCGAGATCCAGAACGCGATCCGCACCGCCCGCTATCTGGCGAAATGGG
ACACGGGCGAGGATTTCGACACCTTCATCAATGCCGCCGTGGAGCAGTTCGCGCCCCGCATCGACAGCGAATACGCCGAC
GAGATCCAGGGCATCGCCGACGGGGCGAAGCTCACGTTCGCAGAAGTGCTTGCGTGGAACGGCTACATGGATCTGCTGCA
AAGCTGGTGGCCGCAGCACGCTGCGCAGCAGAAACCGCAACTCGGGTTGAAGCCGTGGCGCGGACGGCGCGGGCATCATT
GCAGCGCATTCATCGCGACGGGCAGCGCGACGCGCGACGGCCGCATCGTCATGGCGCACAACTCATGGGACCGCTATGCG
GCGGGCGACGCGTTCAACGTCGTGTTCGACATCGTCCCGGAAGCGGGCAACCGCATTCTGATGCAGGGGCTGCCCGGCTG
CATCTCGAGCCTGACGGACTTCTGGGTCACGTCGGCGGGCCTGATGGTGACGGAGACGACGATTTCGAATTTCGCGGGCT
ACAACGCATCGGGCGCGCCCGAGTTCTATCGTTCGCGACGCGCGACCCAGTACGCGAACAGCATCGGAGAATGGTGCGAG
ATGTTCGCGATGGCCAACAACGGCGGCTACGCGAACAGCTGGCTGATCGGCGACGCGAAGACGGGCGAAATCGCCCGCTA
TGAACTCGGTCTGCACTACTCCGGCTTCGAAAGCACGAAAGACGGTTTCTATAGCGGCTACAACACGGCGACAGACCTGA
AAATCCGCAACCAGGAATGCACGGGCGAAGGCGAGGACTACACCGACGTGCGGAAGAACGGCGCGCGGCGGCTGCGCTTC
ATGCAGCTGGAGGAAACGCATCGCGGCCGCATCGACGTCGAACTGGCGAAGGCGATGATCGCCGATCATCACGACGTCTA
CCTCGATCGACCGGACAACCCGTGTTCGCGCACGATCTGCGGCCACCTCGAGCTCGACGACCAGCGTTTCGGAGGCTCGG
ATCACGGCCCGTTCAATCCTTGGGGCGCGAACGACGGCAAGGTCGTCGACAGCGAGATGGCGCGCGACATGGCGTTCTTC
GCGCGCTGGGGACATCCGTGCGGCCGGCCCTTCGATGCGCAGGCGTTCATGAAACGCCATCCGCAGTGGAACTGGCTGAA
CGGCTATATGCGCGACCGGCCGTCGTGGCCCTGGACGCGTTTCGAGGTGCTGCGCTGA

Upstream 100 bases:

>100_bases
CACGGCCCCGGGCACGAAAGAAGCTGCAAGCCGCATCCCGCGACATACGGCGCTGAGCAACGCCGGCGGCGATGCCACGT
ACGTACGAACGGGAGCGAAG

Downstream 100 bases:

>100_bases
GCCCGGGGCGTCACCGCCTGCCCCACGCCGGGTTAACGCGACCCGCTTTCTACATACGTGATGCCGTGCGCATGCCGCGC
AGCCACACGGACGCTCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MSKPSIDAVRRDHAGWIFVHIQGEPYDRGEQHGQLLAAEIQNAIRTARYLAKWDTGEDFDTFINAAVEQFAPRIDSEYAD
EIQGIADGAKLTFAEVLAWNGYMDLLQSWWPQHAAQQKPQLGLKPWRGRRGHHCSAFIATGSATRDGRIVMAHNSWDRYA
AGDAFNVVFDIVPEAGNRILMQGLPGCISSLTDFWVTSAGLMVTETTISNFAGYNASGAPEFYRSRRATQYANSIGEWCE
MFAMANNGGYANSWLIGDAKTGEIARYELGLHYSGFESTKDGFYSGYNTATDLKIRNQECTGEGEDYTDVRKNGARRLRF
MQLEETHRGRIDVELAKAMIADHHDVYLDRPDNPCSRTICGHLELDDQRFGGSDHGPFNPWGANDGKVVDSEMARDMAFF
ARWGHPCGRPFDAQAFMKRHPQWNWLNGYMRDRPSWPWTRFEVLR

Sequences:

>Translated_445_residues
MSKPSIDAVRRDHAGWIFVHIQGEPYDRGEQHGQLLAAEIQNAIRTARYLAKWDTGEDFDTFINAAVEQFAPRIDSEYAD
EIQGIADGAKLTFAEVLAWNGYMDLLQSWWPQHAAQQKPQLGLKPWRGRRGHHCSAFIATGSATRDGRIVMAHNSWDRYA
AGDAFNVVFDIVPEAGNRILMQGLPGCISSLTDFWVTSAGLMVTETTISNFAGYNASGAPEFYRSRRATQYANSIGEWCE
MFAMANNGGYANSWLIGDAKTGEIARYELGLHYSGFESTKDGFYSGYNTATDLKIRNQECTGEGEDYTDVRKNGARRLRF
MQLEETHRGRIDVELAKAMIADHHDVYLDRPDNPCSRTICGHLELDDQRFGGSDHGPFNPWGANDGKVVDSEMARDMAFF
ARWGHPCGRPFDAQAFMKRHPQWNWLNGYMRDRPSWPWTRFEVLR
>Mature_444_residues
SKPSIDAVRRDHAGWIFVHIQGEPYDRGEQHGQLLAAEIQNAIRTARYLAKWDTGEDFDTFINAAVEQFAPRIDSEYADE
IQGIADGAKLTFAEVLAWNGYMDLLQSWWPQHAAQQKPQLGLKPWRGRRGHHCSAFIATGSATRDGRIVMAHNSWDRYAA
GDAFNVVFDIVPEAGNRILMQGLPGCISSLTDFWVTSAGLMVTETTISNFAGYNASGAPEFYRSRRATQYANSIGEWCEM
FAMANNGGYANSWLIGDAKTGEIARYELGLHYSGFESTKDGFYSGYNTATDLKIRNQECTGEGEDYTDVRKNGARRLRFM
QLEETHRGRIDVELAKAMIADHHDVYLDRPDNPCSRTICGHLELDDQRFGGSDHGPFNPWGANDGKVVDSEMARDMAFFA
RWGHPCGRPFDAQAFMKRHPQWNWLNGYMRDRPSWPWTRFEVLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005079 [H]

Pfam domain/function: PF03417 AAT [H]

EC number: NA

Molecular weight: Translated: 50379; Mature: 50247

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPSIDAVRRDHAGWIFVHIQGEPYDRGEQHGQLLAAEIQNAIRTARYLAKWDTGEDFD
CCCCCCHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
TFINAAVEQFAPRIDSEYADEIQGIADGAKLTFAEVLAWNGYMDLLQSWWPQHAAQQKPQ
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC
LGLKPWRGRRGHHCSAFIATGSATRDGRIVMAHNSWDRYAAGDAFNVVFDIVPEAGNRIL
CCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHEEHEEECCCCCCEEE
MQGLPGCISSLTDFWVTSAGLMVTETTISNFAGYNASGAPEFYRSRRATQYANSIGEWCE
ECCCCHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MFAMANNGGYANSWLIGDAKTGEIARYELGLHYSGFESTKDGFYSGYNTATDLKIRNQEC
HHHHCCCCCCCCEEEECCCCCCCEEEEEECEEECCCCCCCCCCCCCCCCEEEEEEECCCC
TGEGEDYTDVRKNGARRLRFMQLEETHRGRIDVELAKAMIADHHDVYLDRPDNPCSRTIC
CCCCCCHHHHHHCHHHHEEEEEHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHCEE
GHLELDDQRFGGSDHGPFNPWGANDGKVVDSEMARDMAFFARWGHPCGRPFDAQAFMKRH
CCEEECCHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC
PQWNWLNGYMRDRPSWPWTRFEVLR
CCCCCCCCHHCCCCCCCCHHHEECC
>Mature Secondary Structure 
SKPSIDAVRRDHAGWIFVHIQGEPYDRGEQHGQLLAAEIQNAIRTARYLAKWDTGEDFD
CCCCCHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
TFINAAVEQFAPRIDSEYADEIQGIADGAKLTFAEVLAWNGYMDLLQSWWPQHAAQQKPQ
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC
LGLKPWRGRRGHHCSAFIATGSATRDGRIVMAHNSWDRYAAGDAFNVVFDIVPEAGNRIL
CCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHEEHEEECCCCCCEEE
MQGLPGCISSLTDFWVTSAGLMVTETTISNFAGYNASGAPEFYRSRRATQYANSIGEWCE
ECCCCHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MFAMANNGGYANSWLIGDAKTGEIARYELGLHYSGFESTKDGFYSGYNTATDLKIRNQEC
HHHHCCCCCCCCEEEECCCCCCCEEEEEECEEECCCCCCCCCCCCCCCCEEEEEEECCCC
TGEGEDYTDVRKNGARRLRFMQLEETHRGRIDVELAKAMIADHHDVYLDRPDNPCSRTIC
CCCCCCHHHHHHCHHHHEEEEEHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHCEE
GHLELDDQRFGGSDHGPFNPWGANDGKVVDSEMARDMAFFARWGHPCGRPFDAQAFMKRH
CCEEECCHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC
PQWNWLNGYMRDRPSWPWTRFEVLR
CCCCCCCCHHCCCCCCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]