| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475964
Identifier: 186475964
GI number: 186475964
Start: 1355000
End: 1356724
Strand: Direct
Name: 186475964
Synonym: Bphy_1202
Alternate gene names: NA
Gene position: 1355000-1356724 (Clockwise)
Preceding gene: 186475963
Following gene: 186475965
Centisome position: 38.95
GC content: 63.36
Gene sequence:
>1725_bases ATGCATCTACAGCCGCCCATGTCCCAGGCATGCGGGACGAGCCAGGCGTCACGCTCGATCGTGCGCGCCGGCAACGCCGT TGTTGCGTTGATACTCGCGCTCTTTTGCACGGCCTGCGGCAACGGTTCGTCGAACAATGCGAGCGCGAGCAGTTCAGGGA CAAGCGGCGAGGCGGGCACAGGCTCGGGCAGCAGTTCGCCATCCGCTTCCACAATCGCGTTCGCCACCGACGTACTGATG CATCACAACGACCTCGCACGCACCGGGCAAATGCTCGCAGAAACGACGCTCACGCCGGCCAACGTGAATGCGACGTCGTT CGGCAAGATCGCGTTTCTTCCCGCCGACGGCAAGGTGGACGGCCAGCCGCTATCCGTCACGAGTCTGTCCATCGGCGGCA CGACGCATAACGTGATCTATGTCGTCACCGAACACAACAGCGTCTATGCGTACGACGCCGACAACAATGCGCAACTGTGG AAGGTGTCGCTGACGGGCGCAAACGAAACGCCCAGCGACAATCGCGGCTGCACCGACATCACGCCTGAGATCGGTATCAC GTCGACACCCGTCATCGATCGCAATCGTGGACCGAACGGCGTGCTCTACGCCGTCGCGATGACGAAGGACGCGAGCGGCG GCTATCACCATCGCCTGCATGCGCTCGATCTGGCGAGCGGCGCCGAACTCTTCGGCGGCCCGAGCGACATCTCGGCCACT TATCCGGGCTCGGGTGGCAACAGCGTCAACGGCGTGCTCACGTTCGATCCTTCGCTGCACACCGAACGCGTCGCGCTGAC GCTCGTGAACGGCAACATCTTCATGGGCTGGACCGCGCATTGCATGGCGGGCGCCTACACCGGCTGGATCATGAGTTATA GCGCCGATACGCTGAAGCAGACGGGCGTCGTCAATGTCGCGCCCAACGGGCACCAGGGCTCCGTGTGGATGGCGGGTTCG GGCATGGCGTCGGACGGCACGTCCATCTATGTGGTGGACGGCAACGGCACGTTCGGCACGACGCTCGACGCAAACGGCTT CCCCGTCGATAGCGACTATGGCAATTCGTTCATGAAGCTCTCGGCGGCCCCACTCAAGATCACCGATTACTTCGCGCCGC TCGATGTCGTTCAACTCGCGAATGCAGACGGCGATTTCGGCTCGGGCGGCGCGATGCTGCTTCCCGACGCGAGGACCGCG GACGGCACTGTCAAGCATCTCGCCGTGGCGGCGGGCAAGGACAACAAGATCTATGTAGTCGATCGCGACGCGATGGGCAA ATTCAGCGCCACGTCGAACAACATCTGGCAAGTGCTGACGGGCACGCTTGCTGGCGGCATCTGGGGCTCGCCCGCCTGGT ACAACGGCACCGTCTATTACGGCGCACTGAACGACAACATCAAGGCGCTACCCGTCACGAACGCGCTGCTCGCAACCACC GCTGCGTCCAAAAGTCCGACGACATTTCCCTATCCCGGCGCCGTCCCCGCCATCTCCGCGAACGGCACATCGAACGGCAT ACTGTGGGCCGCCGAAAACGGCACGACGGGCGCATTGCACGCGTACGACGCGACCAATCTCGGGCGCGAGCTTTACAACA GCAATCAGGCGGGAACGCGCGACCAGTGGGGCGCGGGCAACAAGTTCATCACGCCGACGATTTCACGCGGCAAGGTCTAC GTCGGGGCGACCAACGGCGTCGCCGTGTTCGGCCTGCTACATTGA
Upstream 100 bases:
>100_bases CATTCTTAACATGATGAGAATGGTTCGCGCTGCATAGAACAGCGAACATGCGCGATGCCGCCATGCGAGGACGCTCATAG GGGCGCAGGAGGATATACGC
Downstream 100 bases:
>100_bases TATCAAGACGTGCAGACAGCGCCTATCGCGTCGCAGCACGGAAATTGGCGACGAATGGCGTGCTTCTGGCGTGCTGCGCC GCTGCGACGCGATATCCTGA
Product: Pyrrolo-quinoline quinone
Products: NA
Alternate protein names: Legume Lectin Beta Domain Protein
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MHLQPPMSQACGTSQASRSIVRAGNAVVALILALFCTACGNGSSNNASASSSGTSGEAGTGSGSSSPSASTIAFATDVLM HHNDLARTGQMLAETTLTPANVNATSFGKIAFLPADGKVDGQPLSVTSLSIGGTTHNVIYVVTEHNSVYAYDADNNAQLW KVSLTGANETPSDNRGCTDITPEIGITSTPVIDRNRGPNGVLYAVAMTKDASGGYHHRLHALDLASGAELFGGPSDISAT YPGSGGNSVNGVLTFDPSLHTERVALTLVNGNIFMGWTAHCMAGAYTGWIMSYSADTLKQTGVVNVAPNGHQGSVWMAGS GMASDGTSIYVVDGNGTFGTTLDANGFPVDSDYGNSFMKLSAAPLKITDYFAPLDVVQLANADGDFGSGGAMLLPDARTA DGTVKHLAVAAGKDNKIYVVDRDAMGKFSATSNNIWQVLTGTLAGGIWGSPAWYNGTVYYGALNDNIKALPVTNALLATT AASKSPTTFPYPGAVPAISANGTSNGILWAAENGTTGALHAYDATNLGRELYNSNQAGTRDQWGAGNKFITPTISRGKVY VGATNGVAVFGLLH
Sequences:
>Translated_574_residues MHLQPPMSQACGTSQASRSIVRAGNAVVALILALFCTACGNGSSNNASASSSGTSGEAGTGSGSSSPSASTIAFATDVLM HHNDLARTGQMLAETTLTPANVNATSFGKIAFLPADGKVDGQPLSVTSLSIGGTTHNVIYVVTEHNSVYAYDADNNAQLW KVSLTGANETPSDNRGCTDITPEIGITSTPVIDRNRGPNGVLYAVAMTKDASGGYHHRLHALDLASGAELFGGPSDISAT YPGSGGNSVNGVLTFDPSLHTERVALTLVNGNIFMGWTAHCMAGAYTGWIMSYSADTLKQTGVVNVAPNGHQGSVWMAGS GMASDGTSIYVVDGNGTFGTTLDANGFPVDSDYGNSFMKLSAAPLKITDYFAPLDVVQLANADGDFGSGGAMLLPDARTA DGTVKHLAVAAGKDNKIYVVDRDAMGKFSATSNNIWQVLTGTLAGGIWGSPAWYNGTVYYGALNDNIKALPVTNALLATT AASKSPTTFPYPGAVPAISANGTSNGILWAAENGTTGALHAYDATNLGRELYNSNQAGTRDQWGAGNKFITPTISRGKVY VGATNGVAVFGLLH >Mature_574_residues MHLQPPMSQACGTSQASRSIVRAGNAVVALILALFCTACGNGSSNNASASSSGTSGEAGTGSGSSSPSASTIAFATDVLM HHNDLARTGQMLAETTLTPANVNATSFGKIAFLPADGKVDGQPLSVTSLSIGGTTHNVIYVVTEHNSVYAYDADNNAQLW KVSLTGANETPSDNRGCTDITPEIGITSTPVIDRNRGPNGVLYAVAMTKDASGGYHHRLHALDLASGAELFGGPSDISAT YPGSGGNSVNGVLTFDPSLHTERVALTLVNGNIFMGWTAHCMAGAYTGWIMSYSADTLKQTGVVNVAPNGHQGSVWMAGS GMASDGTSIYVVDGNGTFGTTLDANGFPVDSDYGNSFMKLSAAPLKITDYFAPLDVVQLANADGDFGSGGAMLLPDARTA DGTVKHLAVAAGKDNKIYVVDRDAMGKFSATSNNIWQVLTGTLAGGIWGSPAWYNGTVYYGALNDNIKALPVTNALLATT AASKSPTTFPYPGAVPAISANGTSNGILWAAENGTTGALHAYDATNLGRELYNSNQAGTRDQWGAGNKFITPTISRGKVY VGATNGVAVFGLLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58949; Mature: 58949
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLQPPMSQACGTSQASRSIVRAGNAVVALILALFCTACGNGSSNNASASSSGTSGEAGT CCCCCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GSGSSSPSASTIAFATDVLMHHNDLARTGQMLAETTLTPANVNATSFGKIAFLPADGKVD CCCCCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC GQPLSVTSLSIGGTTHNVIYVVTEHNSVYAYDADNNAQLWKVSLTGANETPSDNRGCTDI CCCEEEEEEEECCCCCEEEEEEEECCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCC TPEIGITSTPVIDRNRGPNGVLYAVAMTKDASGGYHHRLHALDLASGAELFGGPSDISAT CCCCCCCCCCEEECCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCHHHCCCCCCCCEE YPGSGGNSVNGVLTFDPSLHTERVALTLVNGNIFMGWTAHCMAGAYTGWIMSYSADTLKQ CCCCCCCCCCEEEEECCCCCCCEEEEEEEECCEEEEEHHHHHHHHHEEEEEECCCHHHHH TGVVNVAPNGHQGSVWMAGSGMASDGTSIYVVDGNGTFGTTLDANGFPVDSDYGNSFMKL CCEEEECCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCEEEE SAAPLKITDYFAPLDVVQLANADGDFGSGGAMLLPDARTADGTVKHLAVAAGKDNKIYVV ECCCEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCEEEEE DRDAMGKFSATSNNIWQVLTGTLAGGIWGSPAWYNGTVYYGALNDNIKALPVTNALLATT ECCCCCCCCCCCCCHHEEHHHHHCCCCCCCCCEECCEEEEEEECCCEEEEEECCEEEEEE AASKSPTTFPYPGAVPAISANGTSNGILWAAENGTTGALHAYDATNLGRELYNSNQAGTR CCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCEEEECCHHHHHHHHHCCCCCCCC DQWGAGNKFITPTISRGKVYVGATNGVAVFGLLH CCCCCCCEEEEEECCCCEEEEEECCCEEEEEEEC >Mature Secondary Structure MHLQPPMSQACGTSQASRSIVRAGNAVVALILALFCTACGNGSSNNASASSSGTSGEAGT CCCCCCCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GSGSSSPSASTIAFATDVLMHHNDLARTGQMLAETTLTPANVNATSFGKIAFLPADGKVD CCCCCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC GQPLSVTSLSIGGTTHNVIYVVTEHNSVYAYDADNNAQLWKVSLTGANETPSDNRGCTDI CCCEEEEEEEECCCCCEEEEEEEECCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCC TPEIGITSTPVIDRNRGPNGVLYAVAMTKDASGGYHHRLHALDLASGAELFGGPSDISAT CCCCCCCCCCEEECCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCHHHCCCCCCCCEE YPGSGGNSVNGVLTFDPSLHTERVALTLVNGNIFMGWTAHCMAGAYTGWIMSYSADTLKQ CCCCCCCCCCEEEEECCCCCCCEEEEEEEECCEEEEEHHHHHHHHHEEEEEECCCHHHHH TGVVNVAPNGHQGSVWMAGSGMASDGTSIYVVDGNGTFGTTLDANGFPVDSDYGNSFMKL CCEEEECCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCEEEE SAAPLKITDYFAPLDVVQLANADGDFGSGGAMLLPDARTADGTVKHLAVAAGKDNKIYVV ECCCEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCEEEEE DRDAMGKFSATSNNIWQVLTGTLAGGIWGSPAWYNGTVYYGALNDNIKALPVTNALLATT ECCCCCCCCCCCCCHHEEHHHHHCCCCCCCCCEECCEEEEEEECCCEEEEEECCEEEEEE AASKSPTTFPYPGAVPAISANGTSNGILWAAENGTTGALHAYDATNLGRELYNSNQAGTR CCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCEEEECCHHHHHHHHHCCCCCCCC DQWGAGNKFITPTISRGKVYVGATNGVAVFGLLH CCCCCCCEEEEEECCCCEEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA