| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475934
Identifier: 186475934
GI number: 186475934
Start: 1311719
End: 1314067
Strand: Reverse
Name: 186475934
Synonym: Bphy_1169
Alternate gene names: NA
Gene position: 1314067-1311719 (Counterclockwise)
Preceding gene: 186475935
Following gene: 186475933
Centisome position: 37.77
GC content: 65.94
Gene sequence:
>2349_bases ATGACAAGTTCTTCCGGCTCATACGACGACGAGCCGTTGGTATCGATAAGCATGGCGGGCGCTTCCGCCGACGCCTACCG CATCAGCCCCGCGCACTCTGGCGCGCGGTCCGATACGCGTTCGCCAGCACGTGCGACCGCACGTTGGGTCGCGCCTGGCG AAACCGTCGACATTCATGGCCTCGACGTGTCGGGAGGCTTGTTCTATACGGGCGACGTGCAGCGCTCGCATGCCGATTCG ATCGAAGCCTGCGTGATCGACGCCCGCTTCGACGTCGCACGAGAGGGCGCAAATCCGTCGGCGGGATTGGGCAGCGTGGC GCTCAGCTATGACGGATTCACGCCTGAGCAGCGTCGCACGTATCTCGAATGGCTCGCGTCCGACCGGAGAAAATCGGACA TCAACACCGGCTATCTGTTTTTCTATCTGTACGGCCTGGAGCGGCGGGTACTCGTAGACGGCGCGGCGGGCAAGGTCGGC GCCGACGAATTCAATGCGATCGGGAAGGAACTGCGCCGCCTCATCAATCTCGATGCGAACTACGGCTGGCAAAAGCACGT GCGCGCACTGATCGACGCGCTGTCGCTGATGGCATCGCGGCACACGCGCATGTACCTGCAAGCCGCGCCCGACGGGCTCG CGACGGGTTATCAGGTGCCGCTGAACGTGCGCGTCGCGTTCGGCCAGGCGGCGCTCGACCAGCATCCGCTGCCCGCCGAC TGGGCGCTCGCATGGGTCAAGCTCGATCCGATGATGGTGCGGCGCACGGCCGTGGCGCGATGTCCGGAGGAATTCGACCG GGTGTTCACGCGGCAGTATCGCGACCGGTTCGGCGACGGCATGCTGCTTCCCGCGAACCGCACGAAGCTCGATGCTTCGC CGCAACCGTCGTTCCGCGCGCTGAAGAACGTACCCACGCCGGGCTTTCTGGTCGGCTTGCCCGATATCGCCGCTGTCAAC GGCACCCGCAACAAGCTGCAACTGCTGATGCACGAAAGCGCTGCCGCGCTCGATGCGTATAGCCGCTATCTCGGCCGCTA TCCCGAGGCGCAGGGCACGCTCGAAGCGACGCTGACGCTGCCGCCCACGATGTGGCCGCAGGCGACCCACGACGCGATCG ATGCGCTCGCCGCCGAAATCACGGGCGCGACTGCTGTCAGCACCTTCGGTGCGCTGCTGGCGCGCTTCAAGTCGGGCGGC AAGATGACGCGCGACAAGGCGGTCGTGTTCACGACGGCGCTCGCGGAAGCAGGCATTGCCGTCGAGCCGGACGTGCGCCT CGGCGCGCGCACGCCGAAGCCGACGGACGCGGTCGCGCTGTTCGCCGTCGAGCCGGGCGCCGATCCGCTTGCCATCGACG ACGCATACGACGTCGCGACGATCATCGTCGATCTGGCCGCGACCGTTGCGCGCGCGGATGGCGACGCGACGCAGCGCGAG ACGGCTGTGATCGAATGGCAGATCGACCAGTGGCCGCATCTGTCGGACGAACAGCGCAAGCGCCTGAAAGCGCGCAACCT CGTGCAACTCGCGCAGCCGACGGCAAGCGCGGGGCTGAAGAAGAAGCTCTTGCCGCTGTCGGAGGACGTGAAGGCGACGA TCGCGTCGTTCCTCGTGCATACGGCGAACGCCGACGGTGCCGTGTCGCGCGACGAAGTGCGCCTGCTCGAAAAGGTGTAC CGGATGCTCGGCATCGATCCGCAGCGGCTGTACACCGATCTGCATCAGCATGCGAGCGGTGCGCCTGCCACGCCGGCGCA TGGGGGCGCGACGCCGTCGAAAAAACATGCCGACGCGCCCCGGGCAGCCGCCCCGAAGCACGCGTTCGTGCTCGATGCCA CGCGGATCGCCGCGCTCAAGGAAGAGACGGCACGTGTCTCGTCGATGCTGGCCGATGTGTTCGTCGAGGACGCGCATGCG GCACATACGTTACATGCGTTACATACGTCACAGGCAAGCCCGCACGTTGTCGCCGCGCAGTGGAATGCGCCGGATCGCGC CAGGGAACAGCACGTGCTTGCAGCACTTGCAGACACGACGCCAACGGCACGCGGCGATAAACCGACGTCCGCACCCGAAG CGCCGGAAACACCGCAAGCATCTCACGCAAACGAAGCGCCGTTGCTGGGTCTCGACGACGCGCACTCGTCGTTCCTGCGT CTGCTCGTCACCCGCGCATCGTGGTCGCGCGCCGAACTCACCGATGCGGCGTCGCATCTCGAACTGATGCTCGACGGCGC AATCGAACAGGTGAACGAGGCGTCGCTCGACCGTTGGGACGAGCCGCTCACGGACGGAGACGATCCCGTCGAAATCAATC AGGAAGTCGTACAAAGGTTGGCTGCATGA
Upstream 100 bases:
>100_bases ATAGCGGCGCGCGCCCGCGTCACAAGCGTGGGCGGCGCGTGGTTCGTGTCGCAGTTTTGATCCGGATATCACAGGGGCTC GATAAGAGCCGCGCAATTTC
Downstream 100 bases:
>100_bases CAACGATCCGCCCCAGGGACCGCGACGCGGTCCTGCAATCCCTGCGCGCCGGCGTCGTGCCGCGCATCGGGCAACATCTG ATCCAGGTCGGGCGTGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 782; Mature: 781
Protein sequence:
>782_residues MTSSSGSYDDEPLVSISMAGASADAYRISPAHSGARSDTRSPARATARWVAPGETVDIHGLDVSGGLFYTGDVQRSHADS IEACVIDARFDVAREGANPSAGLGSVALSYDGFTPEQRRTYLEWLASDRRKSDINTGYLFFYLYGLERRVLVDGAAGKVG ADEFNAIGKELRRLINLDANYGWQKHVRALIDALSLMASRHTRMYLQAAPDGLATGYQVPLNVRVAFGQAALDQHPLPAD WALAWVKLDPMMVRRTAVARCPEEFDRVFTRQYRDRFGDGMLLPANRTKLDASPQPSFRALKNVPTPGFLVGLPDIAAVN GTRNKLQLLMHESAAALDAYSRYLGRYPEAQGTLEATLTLPPTMWPQATHDAIDALAAEITGATAVSTFGALLARFKSGG KMTRDKAVVFTTALAEAGIAVEPDVRLGARTPKPTDAVALFAVEPGADPLAIDDAYDVATIIVDLAATVARADGDATQRE TAVIEWQIDQWPHLSDEQRKRLKARNLVQLAQPTASAGLKKKLLPLSEDVKATIASFLVHTANADGAVSRDEVRLLEKVY RMLGIDPQRLYTDLHQHASGAPATPAHGGATPSKKHADAPRAAAPKHAFVLDATRIAALKEETARVSSMLADVFVEDAHA AHTLHALHTSQASPHVVAAQWNAPDRAREQHVLAALADTTPTARGDKPTSAPEAPETPQASHANEAPLLGLDDAHSSFLR LLVTRASWSRAELTDAASHLELMLDGAIEQVNEASLDRWDEPLTDGDDPVEINQEVVQRLAA
Sequences:
>Translated_782_residues MTSSSGSYDDEPLVSISMAGASADAYRISPAHSGARSDTRSPARATARWVAPGETVDIHGLDVSGGLFYTGDVQRSHADS IEACVIDARFDVAREGANPSAGLGSVALSYDGFTPEQRRTYLEWLASDRRKSDINTGYLFFYLYGLERRVLVDGAAGKVG ADEFNAIGKELRRLINLDANYGWQKHVRALIDALSLMASRHTRMYLQAAPDGLATGYQVPLNVRVAFGQAALDQHPLPAD WALAWVKLDPMMVRRTAVARCPEEFDRVFTRQYRDRFGDGMLLPANRTKLDASPQPSFRALKNVPTPGFLVGLPDIAAVN GTRNKLQLLMHESAAALDAYSRYLGRYPEAQGTLEATLTLPPTMWPQATHDAIDALAAEITGATAVSTFGALLARFKSGG KMTRDKAVVFTTALAEAGIAVEPDVRLGARTPKPTDAVALFAVEPGADPLAIDDAYDVATIIVDLAATVARADGDATQRE TAVIEWQIDQWPHLSDEQRKRLKARNLVQLAQPTASAGLKKKLLPLSEDVKATIASFLVHTANADGAVSRDEVRLLEKVY RMLGIDPQRLYTDLHQHASGAPATPAHGGATPSKKHADAPRAAAPKHAFVLDATRIAALKEETARVSSMLADVFVEDAHA AHTLHALHTSQASPHVVAAQWNAPDRAREQHVLAALADTTPTARGDKPTSAPEAPETPQASHANEAPLLGLDDAHSSFLR LLVTRASWSRAELTDAASHLELMLDGAIEQVNEASLDRWDEPLTDGDDPVEINQEVVQRLAA >Mature_781_residues TSSSGSYDDEPLVSISMAGASADAYRISPAHSGARSDTRSPARATARWVAPGETVDIHGLDVSGGLFYTGDVQRSHADSI EACVIDARFDVAREGANPSAGLGSVALSYDGFTPEQRRTYLEWLASDRRKSDINTGYLFFYLYGLERRVLVDGAAGKVGA DEFNAIGKELRRLINLDANYGWQKHVRALIDALSLMASRHTRMYLQAAPDGLATGYQVPLNVRVAFGQAALDQHPLPADW ALAWVKLDPMMVRRTAVARCPEEFDRVFTRQYRDRFGDGMLLPANRTKLDASPQPSFRALKNVPTPGFLVGLPDIAAVNG TRNKLQLLMHESAAALDAYSRYLGRYPEAQGTLEATLTLPPTMWPQATHDAIDALAAEITGATAVSTFGALLARFKSGGK MTRDKAVVFTTALAEAGIAVEPDVRLGARTPKPTDAVALFAVEPGADPLAIDDAYDVATIIVDLAATVARADGDATQRET AVIEWQIDQWPHLSDEQRKRLKARNLVQLAQPTASAGLKKKLLPLSEDVKATIASFLVHTANADGAVSRDEVRLLEKVYR MLGIDPQRLYTDLHQHASGAPATPAHGGATPSKKHADAPRAAAPKHAFVLDATRIAALKEETARVSSMLADVFVEDAHAA HTLHALHTSQASPHVVAAQWNAPDRAREQHVLAALADTTPTARGDKPTSAPEAPETPQASHANEAPLLGLDDAHSSFLRL LVTRASWSRAELTDAASHLELMLDGAIEQVNEASLDRWDEPLTDGDDPVEINQEVVQRLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84319; Mature: 84188
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSSGSYDDEPLVSISMAGASADAYRISPAHSGARSDTRSPARATARWVAPGETVDIHG CCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCHHHHEEEECCCCEEEEEE LDVSGGLFYTGDVQRSHADSIEACVIDARFDVAREGANPSAGLGSVALSYDGFTPEQRRT EEECCCEEEECCCCCCCCCCCCEEEEECHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHH YLEWLASDRRKSDINTGYLFFYLYGLERRVLVDGAAGKVGADEFNAIGKELRRLINLDAN HHHHHHCCHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC YGWQKHVRALIDALSLMASRHTRMYLQAAPDGLATGYQVPLNVRVAFGQAALDQHPLPAD CCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEECCEEEEEEECHHHHCCCCCCHH WALAWVKLDPMMVRRTAVARCPEEFDRVFTRQYRDRFGDGMLLPANRTKLDASPQPSFRA HEEEEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHH LKNVPTPGFLVGLPDIAAVNGTRNKLQLLMHESAAALDAYSRYLGRYPEAQGTLEATLTL HHCCCCCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC PPTMWPQATHDAIDALAAEITGATAVSTFGALLARFKSGGKMTRDKAVVFTTALAEAGIA CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHCCCE VEPDVRLGARTPKPTDAVALFAVEPGADPLAIDDAYDVATIIVDLAATVARADGDATQRE ECCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCC TAVIEWQIDQWPHLSDEQRKRLKARNLVQLAQPTASAGLKKKLLPLSEDVKATIASFLVH EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHCCCCCHHHHHHHHHHHHH TANADGAVSRDEVRLLEKVYRMLGIDPQRLYTDLHQHASGAPATPAHGGATPSKKHADAP CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC RAAAPKHAFVLDATRIAALKEETARVSSMLADVFVEDAHAAHTLHALHTSQASPHVVAAQ CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE WNAPDRAREQHVLAALADTTPTARGDKPTSAPEAPETPQASHANEAPLLGLDDAHSSFLR CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHH LLVTRASWSRAELTDAASHLELMLDGAIEQVNEASLDRWDEPLTDGDDPVEINQEVVQRL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AA CC >Mature Secondary Structure TSSSGSYDDEPLVSISMAGASADAYRISPAHSGARSDTRSPARATARWVAPGETVDIHG CCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCHHHHEEEECCCCEEEEEE LDVSGGLFYTGDVQRSHADSIEACVIDARFDVAREGANPSAGLGSVALSYDGFTPEQRRT EEECCCEEEECCCCCCCCCCCCEEEEECHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHH YLEWLASDRRKSDINTGYLFFYLYGLERRVLVDGAAGKVGADEFNAIGKELRRLINLDAN HHHHHHCCHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC YGWQKHVRALIDALSLMASRHTRMYLQAAPDGLATGYQVPLNVRVAFGQAALDQHPLPAD CCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEECCEEEEEEECHHHHCCCCCCHH WALAWVKLDPMMVRRTAVARCPEEFDRVFTRQYRDRFGDGMLLPANRTKLDASPQPSFRA HEEEEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHH LKNVPTPGFLVGLPDIAAVNGTRNKLQLLMHESAAALDAYSRYLGRYPEAQGTLEATLTL HHCCCCCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC PPTMWPQATHDAIDALAAEITGATAVSTFGALLARFKSGGKMTRDKAVVFTTALAEAGIA CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHCCCE VEPDVRLGARTPKPTDAVALFAVEPGADPLAIDDAYDVATIIVDLAATVARADGDATQRE ECCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCC TAVIEWQIDQWPHLSDEQRKRLKARNLVQLAQPTASAGLKKKLLPLSEDVKATIASFLVH EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHCCCCCHHHHHHHHHHHHH TANADGAVSRDEVRLLEKVYRMLGIDPQRLYTDLHQHASGAPATPAHGGATPSKKHADAP CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC RAAAPKHAFVLDATRIAALKEETARVSSMLADVFVEDAHAAHTLHALHTSQASPHVVAAQ CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE WNAPDRAREQHVLAALADTTPTARGDKPTSAPEAPETPQASHANEAPLLGLDDAHSSFLR CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHH LLVTRASWSRAELTDAASHLELMLDGAIEQVNEASLDRWDEPLTDGDDPVEINQEVVQRL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA