| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475900
Identifier: 186475900
GI number: 186475900
Start: 1277278
End: 1278111
Strand: Direct
Name: 186475900
Synonym: Bphy_1135
Alternate gene names: NA
Gene position: 1277278-1278111 (Clockwise)
Preceding gene: 186475899
Following gene: 186475902
Centisome position: 36.71
GC content: 63.43
Gene sequence:
>834_bases ATGAGCTACAAGACGCTGCTCGTCCATATTGACGATAGCCGTCACAGCCCAGCCCGGATCGCGCTTTCCCTTGATCTGGC GAAGCGCTGGGACGCCCATCTCATCGGGCTTTATACCGTTTGCACCGACCTGCTGCCCGGCGCGCTCAGAAAGAGCGAAA GCCGCCCGTTCGCGGAACTCGAAGCACGGCACTCCGAACTTCGGCAGAAGGCGCATGACAGCTTTCTCGCTGCTGCGGAA CGGGCAGGTCATGGCAGCGTCGAATGGCGCGCGCCGCGCGGACCCGCGCAGGAAGTCGCGACGCTCCATGCCCGCCACGC CGACCTGCTGATCCTGGGTCAGGACGATTCGAAAGACGCTGCTTCGTATGTCGCGCCCAATTTCGTCGGCAACCTGATCC TTGATGCGGGCCGCCCCGCCCTCGTCGTTCCTCACGCGGGTACCGTGCAAGCGCTCGGCGAAAATGTACTGATCGCCTGG GACGGCAGCCGCGAAGCCGCTCGCGCAGTGGCCGACGCACTGCCGCTGCTCGAGAACGCCCGCTATGTGACCGTCGACAT AGTGCAACACGCTGACGGCGCCCGCGAAGCGCCCGTGGGAATCGATGTCGCAGCGTGGCTCGATACACATGGCGTGAATG CATCGTTCTCTGCAACGCCCAGGCACATCGGGGCGAATGCGGGCGCCACGCTGCTCAACAGGGCGTCGGATATGCATATC GATCTGCTCGTCATGGGCGCTTACGGCCATTCCCGCGCACGGGAACGCGTGTTCGGTGGTGTAACCCGGACAATGCTGGA ATCGATGACATTGCCTGTGCTGATGTCGCATTGA
Upstream 100 bases:
>100_bases TGTTGCGAGGCGCCAGCTGCCCCGTTCTGATGATTCCTGTGCGCACCGACGACGTGCCGTCGGGAACGGCAACCGACATT CCCGTCGAAAAGGAACTGAC
Downstream 100 bases:
>100_bases GCGCTGTGGCGCAACAACGGGAATCAACGCGACGCAAGGCATGCGTGTGCCGCCGATGTCCATCGCGTCGGTGCCACACA CCAAATTGCCGCTTCGGAAA
Product: UspA domain-containing protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family Protein; Universal Stress Protein Family; Universal Stress Family Protein; Universal Stress UspA Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; UspA-Like Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSYKTLLVHIDDSRHSPARIALSLDLAKRWDAHLIGLYTVCTDLLPGALRKSESRPFAELEARHSELRQKAHDSFLAAAE RAGHGSVEWRAPRGPAQEVATLHARHADLLILGQDDSKDAASYVAPNFVGNLILDAGRPALVVPHAGTVQALGENVLIAW DGSREAARAVADALPLLENARYVTVDIVQHADGAREAPVGIDVAAWLDTHGVNASFSATPRHIGANAGATLLNRASDMHI DLLVMGAYGHSRARERVFGGVTRTMLESMTLPVLMSH
Sequences:
>Translated_277_residues MSYKTLLVHIDDSRHSPARIALSLDLAKRWDAHLIGLYTVCTDLLPGALRKSESRPFAELEARHSELRQKAHDSFLAAAE RAGHGSVEWRAPRGPAQEVATLHARHADLLILGQDDSKDAASYVAPNFVGNLILDAGRPALVVPHAGTVQALGENVLIAW DGSREAARAVADALPLLENARYVTVDIVQHADGAREAPVGIDVAAWLDTHGVNASFSATPRHIGANAGATLLNRASDMHI DLLVMGAYGHSRARERVFGGVTRTMLESMTLPVLMSH >Mature_276_residues SYKTLLVHIDDSRHSPARIALSLDLAKRWDAHLIGLYTVCTDLLPGALRKSESRPFAELEARHSELRQKAHDSFLAAAER AGHGSVEWRAPRGPAQEVATLHARHADLLILGQDDSKDAASYVAPNFVGNLILDAGRPALVVPHAGTVQALGENVLIAWD GSREAARAVADALPLLENARYVTVDIVQHADGAREAPVGIDVAAWLDTHGVNASFSATPRHIGANAGATLLNRASDMHID LLVMGAYGHSRARERVFGGVTRTMLESMTLPVLMSH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29806; Mature: 29675
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYKTLLVHIDDSRHSPARIALSLDLAKRWDAHLIGLYTVCTDLLPGALRKSESRPFAEL CCCEEEEEEECCCCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH EARHSELRQKAHDSFLAAAERAGHGSVEWRAPRGPAQEVATLHARHADLLILGQDDSKDA HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCH ASYVAPNFVGNLILDAGRPALVVPHAGTVQALGENVLIAWDGSREAARAVADALPLLENA HHHHCHHHHHHHHCCCCCCEEEECCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCC RYVTVDIVQHADGAREAPVGIDVAAWLDTHGVNASFSATPRHIGANAGATLLNRASDMHI CEEEEEEEECCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEE DLLVMGAYGHSRARERVFGGVTRTMLESMTLPVLMSH EEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure SYKTLLVHIDDSRHSPARIALSLDLAKRWDAHLIGLYTVCTDLLPGALRKSESRPFAEL CCEEEEEEECCCCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH EARHSELRQKAHDSFLAAAERAGHGSVEWRAPRGPAQEVATLHARHADLLILGQDDSKDA HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCH ASYVAPNFVGNLILDAGRPALVVPHAGTVQALGENVLIAWDGSREAARAVADALPLLENA HHHHCHHHHHHHHCCCCCCEEEECCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCC RYVTVDIVQHADGAREAPVGIDVAAWLDTHGVNASFSATPRHIGANAGATLLNRASDMHI CEEEEEEEECCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEE DLLVMGAYGHSRARERVFGGVTRTMLESMTLPVLMSH EEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA