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The map label for this gene is atpD3 [H]

Identifier: 186475894

GI number: 186475894

Start: 1272179

End: 1273648

Strand: Reverse

Name: atpD3 [H]

Synonym: Bphy_1129

Alternate gene names: 186475894

Gene position: 1273648-1272179 (Counterclockwise)

Preceding gene: 186475896

Following gene: 186475893

Centisome position: 36.61

GC content: 67.41

Gene sequence:

>1470_bases
GTGTCGATTCGCGAGAGTGGAGGCGCCGGCCAGGCCGCAAGCATGGCTGCGACGGGGCGCGTGATCGCGGCGCGGGGCGC
CGTTGTCGATGTCGATTTCGCCGGCGATGCGCTGCCGCCCATCGACACCGCCATGTTCATCGCCGCACCCGATGGTCGAC
AGCCGATTCTCGCCGAAGTACAGGCACACGTGAGTGACACCGTGGTGCGCGCGCTCGCGCTGCAATCGACGGCGGGGATT
GCGCGCGGCACGCTCGCGCATTCGACTGGCCTGCCGATCGAGGTTCCCGTGGGCCCCTTGACGCTCGGTCGGCTGTTCGA
CGTGTCGGGAACTGTCCGGGATTCGGGCGCGCCGCTGCCGCGCGACGTCGAGCGCCGTGCGATTCACCGTGCACCGCCGG
CGCTCGCTGCACAACGCGGCGCGACCCGGCTGTTTGCGACCGGGATCAAGATGATCGACCTGCTCACCCCGCTTGCGCAT
GGCGGCAAGGCCGCGATGTTCGGTGGGGCCGGTGTCGGCAAGACGGTGCTGGTGATGGAACTGATTCATGCGATGGCCGA
ACAGCACAGCGGCATCTCGGTGTTCGCGGGCGTCGGCGAGCGCTCGCGCGAAGGTCACGAGATGCTCGCTGACATGCGCA
GTTCGGGCGTGCTGCCGCGCGCCGTGCTGGTCTACGGGCAGATGAACGAGCCGCCGGGCGCTCGCTGGCGAGTGCCGCTG
ACGGCGCTGACGATCGCCGAATACTTCCGCGACGAACACCATCAGAATGTACTGCTGCTGATGGACAACGTGTTTCGGTT
CGTTCAGGCGGGGGCGGAAGTCTCCGGGCTGCTGGGTCGCATGCCGTCGCGGGTGGGCTATCAGCCGACGCTTGCGAGCG
AGGTTGCGGCGCTGCAGGAACGAATTGCGTCGGTGGGCGAGACGGCCGTGACGGCGATCGAGGCCGTCTACGTTCCCGCC
GATGATTTCACCGACCCCGCCGTGACGACGATTTCGTCGCACGTCGACAGCATGGTGGTGCTCTCGCGGGCGCAGGCGGC
CGAAGGCATGTATCCCGCAATCGATCCCATCGCCTCGACGTCCGTCCTGCTCGATCCGCTTGTCGTCGGCGATGAGCATG
CAGACGTCGCCAATGCCGTACGGCGTGTGATCGAACATCAACGCGAGTTGCAGGACGTGATCGCGCTCCTCGGCATCGAG
GAACTCGGTGCGGACGACCGCCGGATCGTGAAGCGGGCTCGCCGTCTGCAGCGCTTCCTGACGCAGCCGTTCTCGGTGAC
GGAAGCGTTCTCCGGACAGCCTGGCCGGTCGGTCGCGTTGACGGATACGATCGCCGGCTGCAAGGCGATTCTCGATGGCG
AGTGCGATGAGTGGCAGGAAAGCTCGCTGTACATGATCGGTGCGCTCGACGAGGCACGCGCGAAGGAGACGCGTGGCACG
CAGACGGGCGCCGCCGCCGCTGCCGTCTGA

Upstream 100 bases:

>100_bases
CGATGCGGGCATTACGTGCAGTCATTGATCAGGATCAGTTGTGTCGAGGCGCCCGCCGTTATCTTGAAGGGGTTCAGGAA
TTCGACGTGGAGCACAGGAC

Downstream 100 bases:

>100_bases
CGGAGGCGTGCCCATGACGGACCCAACGCTCGATTTGACCATCGCGACACCGGCACAGGTGGTGGTCGATGGCTTACCGA
TCGCCTCATTGCGCGCGGAA

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta 3; F-ATPase subunit beta 3 [H]

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MSIRESGGAGQAASMAATGRVIAARGAVVDVDFAGDALPPIDTAMFIAAPDGRQPILAEVQAHVSDTVVRALALQSTAGI
ARGTLAHSTGLPIEVPVGPLTLGRLFDVSGTVRDSGAPLPRDVERRAIHRAPPALAAQRGATRLFATGIKMIDLLTPLAH
GGKAAMFGGAGVGKTVLVMELIHAMAEQHSGISVFAGVGERSREGHEMLADMRSSGVLPRAVLVYGQMNEPPGARWRVPL
TALTIAEYFRDEHHQNVLLLMDNVFRFVQAGAEVSGLLGRMPSRVGYQPTLASEVAALQERIASVGETAVTAIEAVYVPA
DDFTDPAVTTISSHVDSMVVLSRAQAAEGMYPAIDPIASTSVLLDPLVVGDEHADVANAVRRVIEHQRELQDVIALLGIE
ELGADDRRIVKRARRLQRFLTQPFSVTEAFSGQPGRSVALTDTIAGCKAILDGECDEWQESSLYMIGALDEARAKETRGT
QTGAAAAAV

Sequences:

>Translated_489_residues
MSIRESGGAGQAASMAATGRVIAARGAVVDVDFAGDALPPIDTAMFIAAPDGRQPILAEVQAHVSDTVVRALALQSTAGI
ARGTLAHSTGLPIEVPVGPLTLGRLFDVSGTVRDSGAPLPRDVERRAIHRAPPALAAQRGATRLFATGIKMIDLLTPLAH
GGKAAMFGGAGVGKTVLVMELIHAMAEQHSGISVFAGVGERSREGHEMLADMRSSGVLPRAVLVYGQMNEPPGARWRVPL
TALTIAEYFRDEHHQNVLLLMDNVFRFVQAGAEVSGLLGRMPSRVGYQPTLASEVAALQERIASVGETAVTAIEAVYVPA
DDFTDPAVTTISSHVDSMVVLSRAQAAEGMYPAIDPIASTSVLLDPLVVGDEHADVANAVRRVIEHQRELQDVIALLGIE
ELGADDRRIVKRARRLQRFLTQPFSVTEAFSGQPGRSVALTDTIAGCKAILDGECDEWQESSLYMIGALDEARAKETRGT
QTGAAAAAV
>Mature_488_residues
SIRESGGAGQAASMAATGRVIAARGAVVDVDFAGDALPPIDTAMFIAAPDGRQPILAEVQAHVSDTVVRALALQSTAGIA
RGTLAHSTGLPIEVPVGPLTLGRLFDVSGTVRDSGAPLPRDVERRAIHRAPPALAAQRGATRLFATGIKMIDLLTPLAHG
GKAAMFGGAGVGKTVLVMELIHAMAEQHSGISVFAGVGERSREGHEMLADMRSSGVLPRAVLVYGQMNEPPGARWRVPLT
ALTIAEYFRDEHHQNVLLLMDNVFRFVQAGAEVSGLLGRMPSRVGYQPTLASEVAALQERIASVGETAVTAIEAVYVPAD
DFTDPAVTTISSHVDSMVVLSRAQAAEGMYPAIDPIASTSVLLDPLVVGDEHADVANAVRRVIEHQRELQDVIALLGIEE
LGADDRRIVKRARRLQRFLTQPFSVTEAFSGQPGRSVALTDTIAGCKAILDGECDEWQESSLYMIGALDEARAKETRGTQ
TGAAAAAV

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=466, Percent_Identity=50.4291845493562, Blast_Score=470, Evalue=1e-132,
Organism=Homo sapiens, GI19913424, Length=301, Percent_Identity=27.5747508305648, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI19913428, Length=405, Percent_Identity=24.4444444444444, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI19913426, Length=401, Percent_Identity=23.9401496259352, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI50345984, Length=287, Percent_Identity=23.3449477351916, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI4757810, Length=287, Percent_Identity=23.3449477351916, Blast_Score=83, Evalue=5e-16,
Organism=Escherichia coli, GI1790170, Length=462, Percent_Identity=51.2987012987013, Blast_Score=469, Evalue=1e-133,
Organism=Escherichia coli, GI1788251, Length=307, Percent_Identity=31.9218241042345, Blast_Score=115, Evalue=8e-27,
Organism=Escherichia coli, GI1790172, Length=309, Percent_Identity=25.2427184466019, Blast_Score=87, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI25144756, Length=474, Percent_Identity=49.1561181434599, Blast_Score=464, Evalue=1e-131,
Organism=Caenorhabditis elegans, GI17565854, Length=315, Percent_Identity=28.2539682539683, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17570191, Length=402, Percent_Identity=23.8805970149254, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17510931, Length=403, Percent_Identity=23.8213399503722, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71988063, Length=384, Percent_Identity=23.4375, Blast_Score=82, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI71988080, Length=384, Percent_Identity=23.4375, Blast_Score=81, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322581, Length=468, Percent_Identity=50.6410256410256, Blast_Score=473, Evalue=1e-134,
Organism=Saccharomyces cerevisiae, GI6319603, Length=409, Percent_Identity=24.6943765281174, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6319370, Length=363, Percent_Identity=25.8953168044077, Blast_Score=94, Evalue=5e-20,
Organism=Saccharomyces cerevisiae, GI6320016, Length=260, Percent_Identity=28.4615384615385, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24638766, Length=468, Percent_Identity=49.5726495726496, Blast_Score=463, Evalue=1e-130,
Organism=Drosophila melanogaster, GI28574560, Length=482, Percent_Identity=47.0954356846473, Blast_Score=431, Evalue=1e-121,
Organism=Drosophila melanogaster, GI24583992, Length=318, Percent_Identity=28.3018867924528, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24583988, Length=315, Percent_Identity=28.2539682539683, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24583986, Length=315, Percent_Identity=28.2539682539683, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24583984, Length=315, Percent_Identity=28.2539682539683, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI20129479, Length=307, Percent_Identity=27.6872964169381, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281361666, Length=402, Percent_Identity=23.8805970149254, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24646341, Length=402, Percent_Identity=23.8805970149254, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI17136796, Length=402, Percent_Identity=23.8805970149254, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24658560, Length=288, Percent_Identity=25.6944444444444, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24638768, Length=94, Percent_Identity=43.6170212765958, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 51544; Mature: 51412

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRESGGAGQAASMAATGRVIAARGAVVDVDFAGDALPPIDTAMFIAAPDGRQPILAEV
CCCCCCCCCCCHHHHHHCCCEEEECCCEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHH
QAHVSDTVVRALALQSTAGIARGTLAHSTGLPIEVPVGPLTLGRLFDVSGTVRDSGAPLP
HHHHHHHHHHHHHHHHHCCHHHCCHHCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCCC
RDVERRAIHRAPPALAAQRGATRLFATGIKMIDLLTPLAHGGKAAMFGGAGVGKTVLVME
HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
LIHAMAEQHSGISVFAGVGERSREGHEMLADMRSSGVLPRAVLVYGQMNEPPGARWRVPL
HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCH
TALTIAEYFRDEHHQNVLLLMDNVFRFVQAGAEVSGLLGRMPSRVGYQPTLASEVAALQE
HHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCHHHHHHHCCCHHCCCCCHHHHHHHHHHH
RIASVGETAVTAIEAVYVPADDFTDPAVTTISSHVDSMVVLSRAQAAEGMYPAIDPIAST
HHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
SVLLDPLVVGDEHADVANAVRRVIEHQRELQDVIALLGIEELGADDRRIVKRARRLQRFL
HHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TQPFSVTEAFSGQPGRSVALTDTIAGCKAILDGECDEWQESSLYMIGALDEARAKETRGT
CCCCCHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCHHCCCEEEEECCCHHHHHHHCCC
QTGAAAAAV
CCCCHHHCC
>Mature Secondary Structure 
SIRESGGAGQAASMAATGRVIAARGAVVDVDFAGDALPPIDTAMFIAAPDGRQPILAEV
CCCCCCCCCCHHHHHHCCCEEEECCCEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHH
QAHVSDTVVRALALQSTAGIARGTLAHSTGLPIEVPVGPLTLGRLFDVSGTVRDSGAPLP
HHHHHHHHHHHHHHHHHCCHHHCCHHCCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCCC
RDVERRAIHRAPPALAAQRGATRLFATGIKMIDLLTPLAHGGKAAMFGGAGVGKTVLVME
HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
LIHAMAEQHSGISVFAGVGERSREGHEMLADMRSSGVLPRAVLVYGQMNEPPGARWRVPL
HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCH
TALTIAEYFRDEHHQNVLLLMDNVFRFVQAGAEVSGLLGRMPSRVGYQPTLASEVAALQE
HHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCHHHHHHHCCCHHCCCCCHHHHHHHHHHH
RIASVGETAVTAIEAVYVPADDFTDPAVTTISSHVDSMVVLSRAQAAEGMYPAIDPIAST
HHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
SVLLDPLVVGDEHADVANAVRRVIEHQRELQDVIALLGIEELGADDRRIVKRARRLQRFL
HHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TQPFSVTEAFSGQPGRSVALTDTIAGCKAILDGECDEWQESSLYMIGALDEARAKETRGT
CCCCCHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCHHCCCEEEEECCCHHHHHHHCCC
QTGAAAAAV
CCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA