| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475867
Identifier: 186475867
GI number: 186475867
Start: 1245275
End: 1246234
Strand: Direct
Name: 186475867
Synonym: Bphy_1102
Alternate gene names: NA
Gene position: 1245275-1246234 (Clockwise)
Preceding gene: 186475862
Following gene: 186475870
Centisome position: 35.79
GC content: 64.06
Gene sequence:
>960_bases ATGGCGCAAGCATCCAGCGTGGAGTCAACCGTCGGTCGAGCGTTCCAGCGCGTCATGCTGGCCATCGACGATTCAGAAGC GACGACACGGGCGGCCGAGTATACGAAGGCCCTGTTCGCCGATCGCGCGACGATCCGGGTTGTCACGGTTGCGCAGAATC CGCGCACGCTATTTCCGCTCGGCGCAACCACGCAAGACTTTCTCGCTTCCGCAAGAGACGAAATCGTGGGCGATTCGCGC GCCGCGCTCGCCAGGATCGAGGCCATGTTTGCCGGGACGAAGCTTGAATTCGGCCTGGTGGATCTTTCCTCGCACCGCGG AAATACGGCCGACGCTTTGCTCGACACCGCGTTGCACTGGCACGCGGATCTGATTGTCATGGGCATGCGGCACCATCACG GCCTGCTGCGCTGGGTCGAGGGCACTGTGTCGGAACCGGTTGCGCGCCGTGCGGACTGCTCGTTGCTGCTGGTGCCGCAG GAGACCCGCGTTCAAACGGACAGGCGCGCTCAACGTATGGTCTTCGCGCTGGATGGCAGCGCCTGCTCCATCATGGCGTT GCAGACAGGCCTTCAGCTGGCGGCGTCTGATACCCGATTGCGCGCGGTCTTCGTGGTGGACCGCGCCAGCAACGCGCTAG TCGAAGACGCCATCAACGTACTGGAGAGCGCCTACCTCGAGGAAGGTTGCACAGCACTTGAACGGGCAGCGCGGATATGC GCCGAGCACGGGCGCTATGCGGAGACGGCACTGCTCAAGACACATAGGGAACGCGACGACATTCCTCACGCAATCGTACG TGATGTCCAGGACTGGAAAGGCGATCTGCTCGTTCTCGGCACTCACGGCCGGCGCGGTTTCGAGCGCTGGCTTGTCGGCA GCGTCGCCGCCCGCACGGTGCGACTCGCCGACACGCCCGTATTGCTCGTGCGAGACAGCGCAGCAACGGCCGCTGTGTGA
Upstream 100 bases:
>100_bases CGACCGCGCGGCGTCCACTGTCATTTGACAACGATCAATCGGAAGCGCTCTTTTCGAAGGAGAATCGATGCCATCCTCTC GCCTGATACGGAGAAGCATC
Downstream 100 bases:
>100_bases CCCGACGGCAGTGCGGGGCGGCGCCGTTGCCCCGACGCGCATCACGGCGCGCATTTCTAGCCGAAGAAGGCCGATGGCGA TTGCCGATGCGCGACTTCAT
Product: UspA domain-containing protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein; Universal Stress Protein UspA; Universal Stress Protein Uspa-Like Protein; Universal Stress Protein UspA-Like Protein; Universal Stress Family Protein; Universal Stress; Universal Stress-Related Protein; Universal Stress Protein UspA Family; Universal Stress Protein UspA-Like
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MAQASSVESTVGRAFQRVMLAIDDSEATTRAAEYTKALFADRATIRVVTVAQNPRTLFPLGATTQDFLASARDEIVGDSR AALARIEAMFAGTKLEFGLVDLSSHRGNTADALLDTALHWHADLIVMGMRHHHGLLRWVEGTVSEPVARRADCSLLLVPQ ETRVQTDRRAQRMVFALDGSACSIMALQTGLQLAASDTRLRAVFVVDRASNALVEDAINVLESAYLEEGCTALERAARIC AEHGRYAETALLKTHRERDDIPHAIVRDVQDWKGDLLVLGTHGRRGFERWLVGSVAARTVRLADTPVLLVRDSAATAAV
Sequences:
>Translated_319_residues MAQASSVESTVGRAFQRVMLAIDDSEATTRAAEYTKALFADRATIRVVTVAQNPRTLFPLGATTQDFLASARDEIVGDSR AALARIEAMFAGTKLEFGLVDLSSHRGNTADALLDTALHWHADLIVMGMRHHHGLLRWVEGTVSEPVARRADCSLLLVPQ ETRVQTDRRAQRMVFALDGSACSIMALQTGLQLAASDTRLRAVFVVDRASNALVEDAINVLESAYLEEGCTALERAARIC AEHGRYAETALLKTHRERDDIPHAIVRDVQDWKGDLLVLGTHGRRGFERWLVGSVAARTVRLADTPVLLVRDSAATAAV >Mature_318_residues AQASSVESTVGRAFQRVMLAIDDSEATTRAAEYTKALFADRATIRVVTVAQNPRTLFPLGATTQDFLASARDEIVGDSRA ALARIEAMFAGTKLEFGLVDLSSHRGNTADALLDTALHWHADLIVMGMRHHHGLLRWVEGTVSEPVARRADCSLLLVPQE TRVQTDRRAQRMVFALDGSACSIMALQTGLQLAASDTRLRAVFVVDRASNALVEDAINVLESAYLEEGCTALERAARICA EHGRYAETALLKTHRERDDIPHAIVRDVQDWKGDLLVLGTHGRRGFERWLVGSVAARTVRLADTPVLLVRDSAATAAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34806; Mature: 34675
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQASSVESTVGRAFQRVMLAIDDSEATTRAAEYTKALFADRATIRVVTVAQNPRTLFPL CCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEC GATTQDFLASARDEIVGDSRAALARIEAMFAGTKLEFGLVDLSSHRGNTADALLDTALHW CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHH HADLIVMGMRHHHGLLRWVEGTVSEPVARRADCSLLLVPQETRVQTDRRAQRMVFALDGS HHHHHEEEHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHEEEEEECCC ACSIMALQTGLQLAASDTRLRAVFVVDRASNALVEDAINVLESAYLEEGCTALERAARIC CEEEHHHHHCCCEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEHGRYAETALLKTHRERDDIPHAIVRDVQDWKGDLLVLGTHGRRGFERWLVGSVAARTV HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHEE RLADTPVLLVRDSAATAAV EECCCCEEEEECCCCCCCC >Mature Secondary Structure AQASSVESTVGRAFQRVMLAIDDSEATTRAAEYTKALFADRATIRVVTVAQNPRTLFPL CCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEC GATTQDFLASARDEIVGDSRAALARIEAMFAGTKLEFGLVDLSSHRGNTADALLDTALHW CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHH HADLIVMGMRHHHGLLRWVEGTVSEPVARRADCSLLLVPQETRVQTDRRAQRMVFALDGS HHHHHEEEHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHEEEEEECCC ACSIMALQTGLQLAASDTRLRAVFVVDRASNALVEDAINVLESAYLEEGCTALERAARIC CEEEHHHHHCCCEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEHGRYAETALLKTHRERDDIPHAIVRDVQDWKGDLLVLGTHGRRGFERWLVGSVAARTV HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHEE RLADTPVLLVRDSAATAAV EECCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA