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The map label for this gene is ylbB [H]

Identifier: 186475859

GI number: 186475859

Start: 1235005

End: 1235697

Strand: Reverse

Name: ylbB [H]

Synonym: Bphy_1094

Alternate gene names: 186475859

Gene position: 1235697-1235005 (Counterclockwise)

Preceding gene: 186475863

Following gene: 186475858

Centisome position: 35.52

GC content: 58.59

Gene sequence:

>693_bases
ATGCGCGCAATCGATGTCATGACCACGTCAGTCGTATTTGCACACCCCGATACGACGGTGCAGGAAGCAGCCAGGGCGTT
GGCGGAAAAGCACATTAGCGGCATGCCTGTCGTCGACGACAAGGGCGAGCTGGTCGGCATGGTGACGGAAGGCGACCTGC
TGCACCGCGCCGAGATTGGCACTGGGGTGAACAAGCGCGCCTGGTGGTTGGATTTTCTGGCGTCGACGCGGGAACTGGCG
AGCGAATATATCAAGGAGCACTCGCACAAGGTGAGCGATCTGATGACGACGGATGTCATTACCGTAACCGAAGACACGCC
CGTTTCTGATATTGCCGAGTTGCTCGAACGGCATCGGATCAAACGTGTGCCCGTGGTCAAGGACGGCAAGGTGACGGGTC
TCGTGAGCCGCGCGAACCTGATCCGCGCGCTTGCCAGCATCGTCACGGAGCCGAACGGACCAGCGGCAGCAGATGATCAG
TCGATTCGAGAAGGCATCGTGATCGCACTGAAGAACACCCGTTGGTCGCTGCCGCGCGAAAGTATTCTGGTGAAGGACGG
AGTCGTGCACCTTTGGGGTGTGGTCACAAGTGACGAAGAAGGCAAAGCTATCTGTGTGGCTGCCGAAAACGTACCCGGGG
TGAAGGAGGTGAACAGTCACCTTGAATATCCGCCAGTGCTTCCGGGAATGTAG

Upstream 100 bases:

>100_bases
AAAGTAGCCGCGCTAGTCGAACATTCGCTTATGCGTTGACGGTTCGTTGGGCCGGGTTTGGGACTGCCTGCCGCTTACAT
GATCACCACGGAGGAAAAGG

Downstream 100 bases:

>100_bases
AGGACAAGTCGCGGTGCGACGGAGACCGTCATGACACAGGGCCAGACATTGAAGAATACGGTCGAGCGAATGTTCGGCGA
TGCGCTTCGTCACTGTCTGT

Product: signal-transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MRAIDVMTTSVVFAHPDTTVQEAARALAEKHISGMPVVDDKGELVGMVTEGDLLHRAEIGTGVNKRAWWLDFLASTRELA
SEYIKEHSHKVSDLMTTDVITVTEDTPVSDIAELLERHRIKRVPVVKDGKVTGLVSRANLIRALASIVTEPNGPAAADDQ
SIREGIVIALKNTRWSLPRESILVKDGVVHLWGVVTSDEEGKAICVAAENVPGVKEVNSHLEYPPVLPGM

Sequences:

>Translated_230_residues
MRAIDVMTTSVVFAHPDTTVQEAARALAEKHISGMPVVDDKGELVGMVTEGDLLHRAEIGTGVNKRAWWLDFLASTRELA
SEYIKEHSHKVSDLMTTDVITVTEDTPVSDIAELLERHRIKRVPVVKDGKVTGLVSRANLIRALASIVTEPNGPAAADDQ
SIREGIVIALKNTRWSLPRESILVKDGVVHLWGVVTSDEEGKAICVAAENVPGVKEVNSHLEYPPVLPGM
>Mature_230_residues
MRAIDVMTTSVVFAHPDTTVQEAARALAEKHISGMPVVDDKGELVGMVTEGDLLHRAEIGTGVNKRAWWLDFLASTRELA
SEYIKEHSHKVSDLMTTDVITVTEDTPVSDIAELLERHRIKRVPVVKDGKVTGLVSRANLIRALASIVTEPNGPAAADDQ
SIREGIVIALKNTRWSLPRESILVKDGVVHLWGVVTSDEEGKAICVAAENVPGVKEVNSHLEYPPVLPGM

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 25022; Mature: 25022

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAIDVMTTSVVFAHPDTTVQEAARALAEKHISGMPVVDDKGELVGMVTEGDLLHRAEIG
CCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCHHHHHHHC
TGVNKRAWWLDFLASTRELASEYIKEHSHKVSDLMTTDVITVTEDTPVSDIAELLERHRI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHH
KRVPVVKDGKVTGLVSRANLIRALASIVTEPNGPAAADDQSIREGIVIALKNTRWSLPRE
CCCCEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCEEEEEECCCCCCCHH
SILVKDGVVHLWGVVTSDEEGKAICVAAENVPGVKEVNSHLEYPPVLPGM
HEEEECCCEEEEEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRAIDVMTTSVVFAHPDTTVQEAARALAEKHISGMPVVDDKGELVGMVTEGDLLHRAEIG
CCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCHHHHHHHC
TGVNKRAWWLDFLASTRELASEYIKEHSHKVSDLMTTDVITVTEDTPVSDIAELLERHRI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHH
KRVPVVKDGKVTGLVSRANLIRALASIVTEPNGPAAADDQSIREGIVIALKNTRWSLPRE
CCCCEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCEEEEEECCCCCCCHH
SILVKDGVVHLWGVVTSDEEGKAICVAAENVPGVKEVNSHLEYPPVLPGM
HEEEECCCEEEEEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]