| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475850
Identifier: 186475850
GI number: 186475850
Start: 1223482
End: 1224726
Strand: Reverse
Name: 186475850
Synonym: Bphy_1085
Alternate gene names: NA
Gene position: 1224726-1223482 (Counterclockwise)
Preceding gene: 186475851
Following gene: 186475844
Centisome position: 35.2
GC content: 59.2
Gene sequence:
>1245_bases ATGAGTCACTATCTGGGCCTGGGACCGAAGAGGACCGATGATGCCGTCCCTTCCGCTGACGATATTCTGCGGGATACCCA GAATTTTTCGCTGGTTCTGGGAGGGCCGCTCTTTCAGCTTCTGCGCCGCACGCACATGGCTGACGATGCACTGGAGTTGG TACGCCAGCGTGTTCTCGTGATCACGCTGGTGGCCTGGCTGCCTTTACTGGTGCTCGCAGCACTTGACGGGCATCTGCTC GATCACAGCGTGGCCGTGCCGTTCCTGCTGGATCTTGAAGTTCATATCCGCTTCCTTGTTGCTGTGCCGGTATTGATCAT CGCCGAGCTAATCGTGCATCGCCGTCTGCGCCCGATCGCACGTGCGTTCGTTGATCGGAAGATCATTCCTGACGTCTCCG TAATGCGGTTCGATGAGGCGATCAGGTCGGCGTTCCGTCTGCGTAATTCAGTCGCTGGAGAACTCCTTCTGATTGCCTTG GTGTACGGCGTTGGTGTTCTCGTCGTCTGGCGCCAATACACCGCACTGCAAGCGACATCGACATGGTATGCAACCCCCGG CGCTGGCGGCCTGACGCTCTCGCTCGCCGGATTCTGGTACGGCTACGTCAGCGTGCCGATATTCCAATTCCTGTTGATCC GATGGTACTTCCGGTTGTTTATCTGGATGAGGTTTCTCTGGCAGGTATCGCGTATCGAGTTGAGCCTGGTTCCCACTCAT CCCGATCGTGTCGGTGGCCTTGGGTTTCTCGCCAACACGGTCTATGCATTCATGGCTCTCCTGGTCGCGCACGGTGCGAT GCTGGCGGCTCAATTCGCGAACCGCATCTTCTTCGCGGGGGCCGCACTGACGGAGTTCAAGGTGGAGACGGGCGCAATGG TTGTTTTTCTGCTGTGCCTGGTGTTTGGCCCATTGCTGGTCTTCGCGCCGCAGTTGGCCCAGGCGAAGCGGCGGGGGCTG AGTGAATACGGAGCGCTGGCGCAACGGTACGTGCGCGAATTCGACGACAAATGGCTGCGTGGCGGCGCCTCTACCGGCGA AGCCCTCGTGGGGAGTGGCGACATCCAGTCGCTCGCAGATCTGGCGAACAGCTTCGACGTAGTTCGCAACATGCGCATCG TGCCGATAACCCGGGATGCCATCGTGCGCCTTGCGGCCGCAGTTCTTGTGCCGATCCTGCCGCTGGCGCTCACCATGATG TCGGCGGAAGAACTCCTGAAGAAACTGTTCGGACTGTTTTTTTAG
Upstream 100 bases:
>100_bases GGGTCTCAGGTCGAAAATGAATGTGTGATTGTCGACCCAAGTATATGCGGAGCCGTCGAGTTGGCGGCCGGGTCAATTGT GAGTAGAAGGGCACCGAATC
Downstream 100 bases:
>100_bases GCTTCCGCGGGAATACGCGTTTGGCCAGGTCGATGGCAATGATCGTGGGTTCCATCTGGTTCTCCGTGGCGGCGGGATTG CCGAACCAGCAATGTCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MSHYLGLGPKRTDDAVPSADDILRDTQNFSLVLGGPLFQLLRRTHMADDALELVRQRVLVITLVAWLPLLVLAALDGHLL DHSVAVPFLLDLEVHIRFLVAVPVLIIAELIVHRRLRPIARAFVDRKIIPDVSVMRFDEAIRSAFRLRNSVAGELLLIAL VYGVGVLVVWRQYTALQATSTWYATPGAGGLTLSLAGFWYGYVSVPIFQFLLIRWYFRLFIWMRFLWQVSRIELSLVPTH PDRVGGLGFLANTVYAFMALLVAHGAMLAAQFANRIFFAGAALTEFKVETGAMVVFLLCLVFGPLLVFAPQLAQAKRRGL SEYGALAQRYVREFDDKWLRGGASTGEALVGSGDIQSLADLANSFDVVRNMRIVPITRDAIVRLAAAVLVPILPLALTMM SAEELLKKLFGLFF
Sequences:
>Translated_414_residues MSHYLGLGPKRTDDAVPSADDILRDTQNFSLVLGGPLFQLLRRTHMADDALELVRQRVLVITLVAWLPLLVLAALDGHLL DHSVAVPFLLDLEVHIRFLVAVPVLIIAELIVHRRLRPIARAFVDRKIIPDVSVMRFDEAIRSAFRLRNSVAGELLLIAL VYGVGVLVVWRQYTALQATSTWYATPGAGGLTLSLAGFWYGYVSVPIFQFLLIRWYFRLFIWMRFLWQVSRIELSLVPTH PDRVGGLGFLANTVYAFMALLVAHGAMLAAQFANRIFFAGAALTEFKVETGAMVVFLLCLVFGPLLVFAPQLAQAKRRGL SEYGALAQRYVREFDDKWLRGGASTGEALVGSGDIQSLADLANSFDVVRNMRIVPITRDAIVRLAAAVLVPILPLALTMM SAEELLKKLFGLFF >Mature_413_residues SHYLGLGPKRTDDAVPSADDILRDTQNFSLVLGGPLFQLLRRTHMADDALELVRQRVLVITLVAWLPLLVLAALDGHLLD HSVAVPFLLDLEVHIRFLVAVPVLIIAELIVHRRLRPIARAFVDRKIIPDVSVMRFDEAIRSAFRLRNSVAGELLLIALV YGVGVLVVWRQYTALQATSTWYATPGAGGLTLSLAGFWYGYVSVPIFQFLLIRWYFRLFIWMRFLWQVSRIELSLVPTHP DRVGGLGFLANTVYAFMALLVAHGAMLAAQFANRIFFAGAALTEFKVETGAMVVFLLCLVFGPLLVFAPQLAQAKRRGLS EYGALAQRYVREFDDKWLRGGASTGEALVGSGDIQSLADLANSFDVVRNMRIVPITRDAIVRLAAAVLVPILPLALTMMS AEELLKKLFGLFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46016; Mature: 45885
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHYLGLGPKRTDDAVPSADDILRDTQNFSLVLGGPLFQLLRRTHMADDALELVRQRVLV CCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHH ITLVAWLPLLVLAALDGHLLDHSVAVPFLLDLEVHIRFLVAVPVLIIAELIVHRRLRPIA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAFVDRKIIPDVSVMRFDEAIRSAFRLRNSVAGELLLIALVYGVGVLVVWRQYTALQATS HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TWYATPGAGGLTLSLAGFWYGYVSVPIFQFLLIRWYFRLFIWMRFLWQVSRIELSLVPTH CEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC PDRVGGLGFLANTVYAFMALLVAHGAMLAAQFANRIFFAGAALTEFKVETGAMVVFLLCL CCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH VFGPLLVFAPQLAQAKRRGLSEYGALAQRYVREFDDKWLRGGASTGEALVGSGDIQSLAD HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH LANSFDVVRNMRIVPITRDAIVRLAAAVLVPILPLALTMMSAEELLKKLFGLFF HHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SHYLGLGPKRTDDAVPSADDILRDTQNFSLVLGGPLFQLLRRTHMADDALELVRQRVLV CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHH ITLVAWLPLLVLAALDGHLLDHSVAVPFLLDLEVHIRFLVAVPVLIIAELIVHRRLRPIA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAFVDRKIIPDVSVMRFDEAIRSAFRLRNSVAGELLLIALVYGVGVLVVWRQYTALQATS HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TWYATPGAGGLTLSLAGFWYGYVSVPIFQFLLIRWYFRLFIWMRFLWQVSRIELSLVPTH CEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC PDRVGGLGFLANTVYAFMALLVAHGAMLAAQFANRIFFAGAALTEFKVETGAMVVFLLCL CCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH VFGPLLVFAPQLAQAKRRGLSEYGALAQRYVREFDDKWLRGGASTGEALVGSGDIQSLAD HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH LANSFDVVRNMRIVPITRDAIVRLAAAVLVPILPLALTMMSAEELLKKLFGLFF HHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA