| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is wcaL [C]
Identifier: 186475831
GI number: 186475831
Start: 1198720
End: 1199877
Strand: Direct
Name: wcaL [C]
Synonym: Bphy_1066
Alternate gene names: 186475831
Gene position: 1198720-1199877 (Clockwise)
Preceding gene: 186475830
Following gene: 186475832
Centisome position: 34.45
GC content: 68.31
Gene sequence:
>1158_bases ATGACCACTCGTTCCATCAAATCGCTGCAAATCGGCATGCACTGGTTTCCCGAGCGCGCGGGCGGTCTCGACCGCATGTA CTACTCGCTGATCGGCGCGCTGCCCGGCGCCGGCGTCGAAGTGCGCGGCGTCGTCGCGGGCTCGGAGCGCGTCGCGCAGG ACACCAACGGCGCAATCAACGGCTTCGGCCCGGCAGCGCAATCGCTGCCCCTGCGCCTGATGGCCGCGCGCCGCGCGCTG CGCCGCGAGATTCGCGAGCAGCGCCCCGACGTGATCTCGTCTCACTTCGCGCTGTACACCTTTCCGGGTCTCGACGTGAC GCGCGGTATTCCGCAGGTGTCTCACTTTCAGGGGCCGTGGGCCGACGAGAGCCACGTCGAAGGCGCCGATTCGCTCGGCC AGCGCGCGAAGCGCTATCTGGAGCAGGCGGTGTACGCGCGCTCGTCGCGGCTGATCGTGCTGTCCGACGCATTCGGCCGC ATTCTCACGTCGCGTTACGGCATTCCCGCCGACCGCGTGCGCGTCGTGCCCGGCTGCGTGAACGTCGACCAGTTCAATCT GCCCCTCACGCAAAACGAAGCGCGTCTGCGCCTGCAACTGCCGTTGGGAAGGCCCATCGTGCTGGCCGTGCGGCGCCTCG TGCGGCGCATGGGCCTCGAAGATCTGATCGACGCGGTGAAGATCGTCAAGCGCCGCCAGCCCGATGTGCTGCTGCTGATC GCGGGCAAGGGCCGCCTGCAGCAAGCGTTGCAGCAGCGTATCGACGATGCGGGGCTCGGCGACAACGTGAAGCTGCTTGG CTTCGTGCCCGACGAGCAGTTGGCGTCGCTGTATCGCGCGGCGGATATCAGCGTCGTGCCGACGGTCGCGCTCGAAGGCT TCGGCCTGATTACCGTCGAATCGCTGGCGTCGGGCACGCCCGTGCTGGTGACGCCCGTGGGCGGTCTGCCGGAAGCGGTG GCGGGGCTGTCGCAGGATCTCGTGCTGCCGTCGACGGGCGCGGACGCGATTGCCGACGGCCTCGCGAGGGCGTTCGACGG CTCCATCCGACTGCCGGATGCCGATGCCTGCCGCGCTTATGCACGGGCCCACTTCGACAACCCCGTGATCGCGAAGCGTG TCGCGGCCGTGTATAACGAGGCGATTCAGGCAGCGTAG
Upstream 100 bases:
>100_bases GCTGCCGGCGAACGCGCTCGCAGGACCGCAAGGCGCGGACCGCGCCTGATGCGCATCACGCTCTCGCGTACATCGACAAA CGACAAGGAAGGCACACACC
Downstream 100 bases:
>100_bases TCGCCAGCCGCTGCGACGGCGAGGCGAAGTGACGAACGGGACGGCCGCGAGGCCGTCCTTTTTCTTTGGGTGGTGGGCGC ACGTGAGAAGCGCTCATCGC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MTTRSIKSLQIGMHWFPERAGGLDRMYYSLIGALPGAGVEVRGVVAGSERVAQDTNGAINGFGPAAQSLPLRLMAARRAL RREIREQRPDVISSHFALYTFPGLDVTRGIPQVSHFQGPWADESHVEGADSLGQRAKRYLEQAVYARSSRLIVLSDAFGR ILTSRYGIPADRVRVVPGCVNVDQFNLPLTQNEARLRLQLPLGRPIVLAVRRLVRRMGLEDLIDAVKIVKRRQPDVLLLI AGKGRLQQALQQRIDDAGLGDNVKLLGFVPDEQLASLYRAADISVVPTVALEGFGLITVESLASGTPVLVTPVGGLPEAV AGLSQDLVLPSTGADAIADGLARAFDGSIRLPDADACRAYARAHFDNPVIAKRVAAVYNEAIQAA
Sequences:
>Translated_385_residues MTTRSIKSLQIGMHWFPERAGGLDRMYYSLIGALPGAGVEVRGVVAGSERVAQDTNGAINGFGPAAQSLPLRLMAARRAL RREIREQRPDVISSHFALYTFPGLDVTRGIPQVSHFQGPWADESHVEGADSLGQRAKRYLEQAVYARSSRLIVLSDAFGR ILTSRYGIPADRVRVVPGCVNVDQFNLPLTQNEARLRLQLPLGRPIVLAVRRLVRRMGLEDLIDAVKIVKRRQPDVLLLI AGKGRLQQALQQRIDDAGLGDNVKLLGFVPDEQLASLYRAADISVVPTVALEGFGLITVESLASGTPVLVTPVGGLPEAV AGLSQDLVLPSTGADAIADGLARAFDGSIRLPDADACRAYARAHFDNPVIAKRVAAVYNEAIQAA >Mature_384_residues TTRSIKSLQIGMHWFPERAGGLDRMYYSLIGALPGAGVEVRGVVAGSERVAQDTNGAINGFGPAAQSLPLRLMAARRALR REIREQRPDVISSHFALYTFPGLDVTRGIPQVSHFQGPWADESHVEGADSLGQRAKRYLEQAVYARSSRLIVLSDAFGRI LTSRYGIPADRVRVVPGCVNVDQFNLPLTQNEARLRLQLPLGRPIVLAVRRLVRRMGLEDLIDAVKIVKRRQPDVLLLIA GKGRLQQALQQRIDDAGLGDNVKLLGFVPDEQLASLYRAADISVVPTVALEGFGLITVESLASGTPVLVTPVGGLPEAVA GLSQDLVLPSTGADAIADGLARAFDGSIRLPDADACRAYARAHFDNPVIAKRVAAVYNEAIQAA
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 41529; Mature: 41398
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRSIKSLQIGMHWFPERAGGLDRMYYSLIGALPGAGVEVRGVVAGSERVAQDTNGAIN CCCCCCHHHHHCHHCCCHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHCCCCCCC GFGPAAQSLPLRLMAARRALRREIREQRPDVISSHFALYTFPGLDVTRGIPQVSHFQGPW CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEECCCHHHHCCCCHHHCCCCC ADESHVEGADSLGQRAKRYLEQAVYARSSRLIVLSDAFGRILTSRYGIPADRVRVVPGCV CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCHHHEEECCCCC NVDQFNLPLTQNEARLRLQLPLGRPIVLAVRRLVRRMGLEDLIDAVKIVKRRQPDVLLLI CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE AGKGRLQQALQQRIDDAGLGDNVKLLGFVPDEQLASLYRAADISVVPTVALEGFGLITVE CCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEHHHHHCCCCEEEEH SLASGTPVLVTPVGGLPEAVAGLSQDLVLPSTGADAIADGLARAFDGSIRLPDADACRAY HHCCCCCEEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH ARAHFDNPVIAKRVAAVYNEAIQAA HHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTRSIKSLQIGMHWFPERAGGLDRMYYSLIGALPGAGVEVRGVVAGSERVAQDTNGAIN CCCCCHHHHHCHHCCCHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHCCCCCCC GFGPAAQSLPLRLMAARRALRREIREQRPDVISSHFALYTFPGLDVTRGIPQVSHFQGPW CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEECCCHHHHCCCCHHHCCCCC ADESHVEGADSLGQRAKRYLEQAVYARSSRLIVLSDAFGRILTSRYGIPADRVRVVPGCV CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCHHHEEECCCCC NVDQFNLPLTQNEARLRLQLPLGRPIVLAVRRLVRRMGLEDLIDAVKIVKRRQPDVLLLI CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE AGKGRLQQALQQRIDDAGLGDNVKLLGFVPDEQLASLYRAADISVVPTVALEGFGLITVE CCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEHHHHHCCCCEEEEH SLASGTPVLVTPVGGLPEAVAGLSQDLVLPSTGADAIADGLARAFDGSIRLPDADACRAY HHCCCCCEEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH ARAHFDNPVIAKRVAAVYNEAIQAA HHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]