| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475828
Identifier: 186475828
GI number: 186475828
Start: 1194796
End: 1195968
Strand: Direct
Name: 186475828
Synonym: Bphy_1063
Alternate gene names: NA
Gene position: 1194796-1195968 (Clockwise)
Preceding gene: 186475827
Following gene: 186475829
Centisome position: 34.34
GC content: 67.18
Gene sequence:
>1173_bases ATGACGACGAGGGTCCATGTGCATCTGTTTTACGGCGCCGATCCGCGCTTCTATCGCAAGGGCGAGGACATCGGCTGCCT GTATGGCTATCACCATGCGGAGTCGGACGAATTCCAGCTCAGCTACTCGCAGGACGTGCCGGAAAGCAGGCCCGTGCGCC TCGTGCGCCGCGCGCTGAAGACGATGCTCGGCTTCGATCTGATCCACACACTGCGCAACCGCGACGAGATGCTGCGCTCC GACGTGATCTGGACGCACACCGAACACGAATGGCTGTCCGCCGCGCTGCTGCTGATGATGAGCGGCAAGCGCCACGACGA CACCCGGCAGCCGCTGCTGGTCGCGCAAAGCGTGTGGCTGATCGACAAGTGGCAGCAATATGGCGCGCTGCGGCGCTGGT TCTATCGCAAGCTGATCGGGCGTGCCGACCTGCTGACGACGCTCGCGCGCGAGAACGCCGAACTGTGCCGCGACTACTTC GATCGCGACGCCACGCAGCTGTTTTACGGGCTGAACACGCGTGATTTCCCGGTGCAGCCGCCGCAGCAATGGCAACCGGG CACGCCGTTGCGCATCGCGGCCATTGGCAACGATCGCGACCGTGACTGGGAAACGCTGATCAAGGCCGTGGGCAACGACC CGCGCTTTACGGTGCGGCTCGCGACGCGGCGGCGCATTGCGCGTTCGCTGCATTCGCCGAACGTGCACGTCGCGCCGGCA GCGGGCCTCGGGAAGCAGCGCGAACTGTACGGCTGGGCCGACGTGATCGTCGTGCCGCTGCGGCCGAACACGCATGCGTC GGGCATCACGGTGATGCTCGAGGCGGCCGCGGTCGGCAAGCCGATGGTCGTGACGAATGTGGGCGGGCTGCAGGATTACT TTTCGTCGCGCGCGGCGGCGTACGTGCCGCCATTCGACGCCGACGCGCTGCGCGATGCGCTGCTTGGCCTGATGATGTCG CCAGGCGACGCGCTGCAACAGGCGCAGGCGGCTGCGGCCGAACTCGTGTCGCGCGATCACACGACGCAGCACTATGCGCA GCAGCACGTGAGGATCACGCGCGACCTGCTGCGCCGGCGCGGTCGGACGGCGCAGCAGGGCAAGCGCGAACGCGAGCACG GACACACGCATCAAGCCGACGCCGTGCCGTCGCAGAGCCGGGGAGGGCGGTAA
Upstream 100 bases:
>100_bases CGCGCACGAAGCTCGCGCGCTGGCATGCCGTGCGTACGGGCGCACGCGAAGCGCGGCGCGCGTACGCAGCGCATCGCGGC ACGGGCACGGGGGTGCACGC
Downstream 100 bases:
>100_bases GCGATGTCGTCGATTGCACGAGCGGGCATCGAGGGCACGTCGCGCGCCGTCAGGCGCGAGCGCCGCGACTGGCTGCCGCC TGCGTTGCTGTGGCTCGTCA
Product: putative glycosyltransferase group 1, RfaG-like protein
Products: NA
Alternate protein names: Glycosyltransferase Group 1 RfaG-Like Protein; Glycosyltransferase Group 1 RfaG-Like; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MTTRVHVHLFYGADPRFYRKGEDIGCLYGYHHAESDEFQLSYSQDVPESRPVRLVRRALKTMLGFDLIHTLRNRDEMLRS DVIWTHTEHEWLSAALLLMMSGKRHDDTRQPLLVAQSVWLIDKWQQYGALRRWFYRKLIGRADLLTTLARENAELCRDYF DRDATQLFYGLNTRDFPVQPPQQWQPGTPLRIAAIGNDRDRDWETLIKAVGNDPRFTVRLATRRRIARSLHSPNVHVAPA AGLGKQRELYGWADVIVVPLRPNTHASGITVMLEAAAVGKPMVVTNVGGLQDYFSSRAAAYVPPFDADALRDALLGLMMS PGDALQQAQAAAAELVSRDHTTQHYAQQHVRITRDLLRRRGRTAQQGKREREHGHTHQADAVPSQSRGGR
Sequences:
>Translated_390_residues MTTRVHVHLFYGADPRFYRKGEDIGCLYGYHHAESDEFQLSYSQDVPESRPVRLVRRALKTMLGFDLIHTLRNRDEMLRS DVIWTHTEHEWLSAALLLMMSGKRHDDTRQPLLVAQSVWLIDKWQQYGALRRWFYRKLIGRADLLTTLARENAELCRDYF DRDATQLFYGLNTRDFPVQPPQQWQPGTPLRIAAIGNDRDRDWETLIKAVGNDPRFTVRLATRRRIARSLHSPNVHVAPA AGLGKQRELYGWADVIVVPLRPNTHASGITVMLEAAAVGKPMVVTNVGGLQDYFSSRAAAYVPPFDADALRDALLGLMMS PGDALQQAQAAAAELVSRDHTTQHYAQQHVRITRDLLRRRGRTAQQGKREREHGHTHQADAVPSQSRGGR >Mature_389_residues TTRVHVHLFYGADPRFYRKGEDIGCLYGYHHAESDEFQLSYSQDVPESRPVRLVRRALKTMLGFDLIHTLRNRDEMLRSD VIWTHTEHEWLSAALLLMMSGKRHDDTRQPLLVAQSVWLIDKWQQYGALRRWFYRKLIGRADLLTTLARENAELCRDYFD RDATQLFYGLNTRDFPVQPPQQWQPGTPLRIAAIGNDRDRDWETLIKAVGNDPRFTVRLATRRRIARSLHSPNVHVAPAA GLGKQRELYGWADVIVVPLRPNTHASGITVMLEAAAVGKPMVVTNVGGLQDYFSSRAAAYVPPFDADALRDALLGLMMSP GDALQQAQAAAAELVSRDHTTQHYAQQHVRITRDLLRRRGRTAQQGKREREHGHTHQADAVPSQSRGGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44465; Mature: 44334
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRVHVHLFYGADPRFYRKGEDIGCLYGYHHAESDEFQLSYSQDVPESRPVRLVRRALK CCCEEEEEEEECCCCHHCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH TMLGFDLIHTLRNRDEMLRSDVIWTHTEHEWLSAALLLMMSGKRHDDTRQPLLVAQSVWL HHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH IDKWQQYGALRRWFYRKLIGRADLLTTLARENAELCRDYFDRDATQLFYGLNTRDFPVQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC PQQWQPGTPLRIAAIGNDRDRDWETLIKAVGNDPRFTVRLATRRRIARSLHSPNVHVAPA CCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCEEEECC AGLGKQRELYGWADVIVVPLRPNTHASGITVMLEAAAVGKPMVVTNVGGLQDYFSSRAAA CCCCCCHHHCCEEEEEEEECCCCCCCCCEEEEEEHHHCCCCEEEEECCCHHHHHHCCCEE YVPPFDADALRDALLGLMMSPGDALQQAQAAAAELVSRDHTTQHYAQQHVRITRDLLRRR ECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC GRTAQQGKREREHGHTHQADAVPSQSRGGR CCCHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTRVHVHLFYGADPRFYRKGEDIGCLYGYHHAESDEFQLSYSQDVPESRPVRLVRRALK CCEEEEEEEECCCCHHCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH TMLGFDLIHTLRNRDEMLRSDVIWTHTEHEWLSAALLLMMSGKRHDDTRQPLLVAQSVWL HHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH IDKWQQYGALRRWFYRKLIGRADLLTTLARENAELCRDYFDRDATQLFYGLNTRDFPVQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC PQQWQPGTPLRIAAIGNDRDRDWETLIKAVGNDPRFTVRLATRRRIARSLHSPNVHVAPA CCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCEEEECC AGLGKQRELYGWADVIVVPLRPNTHASGITVMLEAAAVGKPMVVTNVGGLQDYFSSRAAA CCCCCCHHHCCEEEEEEEECCCCCCCCCEEEEEEHHHCCCCEEEEECCCHHHHHHCCCEE YVPPFDADALRDALLGLMMSPGDALQQAQAAAAELVSRDHTTQHYAQQHVRITRDLLRRR ECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC GRTAQQGKREREHGHTHQADAVPSQSRGGR CCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA