| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475820
Identifier: 186475820
GI number: 186475820
Start: 1183125
End: 1184441
Strand: Direct
Name: 186475820
Synonym: Bphy_1055
Alternate gene names: NA
Gene position: 1183125-1184441 (Clockwise)
Preceding gene: 186475819
Following gene: 186475822
Centisome position: 34.01
GC content: 67.2
Gene sequence:
>1317_bases ATGAAGTTCGTGCGAGCCAAAGCCGCAGCCAGGCCAGGCTGCGTGGAGAACAACATGTTTTTCGATGAGCTAAGCAATGA CGAATGGGCGCAAGTATCGGCGCTCGTTTCTGACGAGCCAGCCGTCCGCCTGAACCGACGCGGACGGCCCCGCGCCGAAC CCCGTATCGTGGCCAATGCCGTTCTGTGGATCCTGACTACTGGCGAGCCGTGGTCGAAGCTTCCCGGTCGCTATCCGTCA GGCCCTACCTGCCGGCGCCGCTTCGAGGAGTGGCAAGCCAACGGCACGCTGGCCGAAGTGATCCGGCTGTTGACGCAGAA TGGGCGCACGTTCGCCTATATCCCGGAGCCGACGCCGCCCGCCGCGCCCAAGCGGGCGCCCGTGGTCGAAGCACCGAAGC CGCGCGATGAACTCGCGCGCGGCGTGTTCTGGAAGAGCCCGGAAACGTGGCAATCGTCCGTTCACGAGCCGGGTGTGACG AGCGGCTGGCGTGCGCTCGCGCCGATGGCCGATATCACGCGCCAGCTCGCCGGTTCCGCTGCTGTGGAAACGGGCTTCGT CGACGCGTCCCGCGCAGATGCCGCCCGTGCGCCGGATGCCGCCGCTGTCTTCGGCGTCGCGCAGCGTTTCGAGGCGAACG CCAATTTGCGAGCGAACATGCAAGCGAACATTCAGGCCTTCGCGGCCGATACCGCGATCGTGCCGGGCGAGGTGGACGAT GAGCGGGCGTATGCGGACGACACATCGGCCGGAAATGCGCTCGCGAGCAGCGAGCACACACCGCTGTGGATGAGTCTCAC GGCGCCGCGCGGCCTGCAGGTTGCCGACCGGCAAGGCTACGTGATCTACGTCGCGGCGGAGCGGGTGCCCAACGACAAGT TCCGCGCGTGGGCGGAAATCATGAAGGACGGCAAGCGTGTCGAGCGCTCGGGCCTGATCGGTCCGCGTTTCTCGGACGCC GATGCGGCACACCGTTTCGCACTCGACTGGGCGCGTCAATGGATCGACCGCGAATGCCGTACGCATGAAGCGGGGGCAGG CGCGCACGCGGGCCATATGGCCAGTCAGAAAGTGAGTGCGGGCGTGCACACGCCGAAGGTCGGCGTGGGTCCCATCACGC GCGCGATGCCGGAACTCACGCCGACGCCGGCGCTCGCCGCGGCGAATGCGCCGTCCGCGGCAACGGGCAACGGGCATGTG CCGCAGCATCTGAATCCGCGTCTGCTGCCGCTGCGCCGCTATCCGTCCGACGCGGCCAAGGACAAGGCGGCCGAACGCTT TCCGCTGGTATCGACGCTGATTTCCCACGCGAGATAA
Upstream 100 bases:
>100_bases TCCCGGTGAAATACCGCACTAACGAAGTGCGCTTTCGCGATCCCGGCGCAAGAACGTACAAGCATATTGTGCAACCGCGG ACCCGACACGAACCGCCAAA
Downstream 100 bases:
>100_bases CGACGATGGCGTGAACACGCCATCGTTCGACGCTGTGCTGCAACCGGTTACCAAAGGATGGCGGGTACGGATGGCTTGCA AGTCGGTCGCGAGCCGCGCT
Product: putative transposase A-like protein
Products: NA
Alternate protein names: Transposase; IS5 Family Transposase OrfA; Transposase Protein
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MKFVRAKAAARPGCVENNMFFDELSNDEWAQVSALVSDEPAVRLNRRGRPRAEPRIVANAVLWILTTGEPWSKLPGRYPS GPTCRRRFEEWQANGTLAEVIRLLTQNGRTFAYIPEPTPPAAPKRAPVVEAPKPRDELARGVFWKSPETWQSSVHEPGVT SGWRALAPMADITRQLAGSAAVETGFVDASRADAARAPDAAAVFGVAQRFEANANLRANMQANIQAFAADTAIVPGEVDD ERAYADDTSAGNALASSEHTPLWMSLTAPRGLQVADRQGYVIYVAAERVPNDKFRAWAEIMKDGKRVERSGLIGPRFSDA DAAHRFALDWARQWIDRECRTHEAGAGAHAGHMASQKVSAGVHTPKVGVGPITRAMPELTPTPALAAANAPSAATGNGHV PQHLNPRLLPLRRYPSDAAKDKAAERFPLVSTLISHAR
Sequences:
>Translated_438_residues MKFVRAKAAARPGCVENNMFFDELSNDEWAQVSALVSDEPAVRLNRRGRPRAEPRIVANAVLWILTTGEPWSKLPGRYPS GPTCRRRFEEWQANGTLAEVIRLLTQNGRTFAYIPEPTPPAAPKRAPVVEAPKPRDELARGVFWKSPETWQSSVHEPGVT SGWRALAPMADITRQLAGSAAVETGFVDASRADAARAPDAAAVFGVAQRFEANANLRANMQANIQAFAADTAIVPGEVDD ERAYADDTSAGNALASSEHTPLWMSLTAPRGLQVADRQGYVIYVAAERVPNDKFRAWAEIMKDGKRVERSGLIGPRFSDA DAAHRFALDWARQWIDRECRTHEAGAGAHAGHMASQKVSAGVHTPKVGVGPITRAMPELTPTPALAAANAPSAATGNGHV PQHLNPRLLPLRRYPSDAAKDKAAERFPLVSTLISHAR >Mature_438_residues MKFVRAKAAARPGCVENNMFFDELSNDEWAQVSALVSDEPAVRLNRRGRPRAEPRIVANAVLWILTTGEPWSKLPGRYPS GPTCRRRFEEWQANGTLAEVIRLLTQNGRTFAYIPEPTPPAAPKRAPVVEAPKPRDELARGVFWKSPETWQSSVHEPGVT SGWRALAPMADITRQLAGSAAVETGFVDASRADAARAPDAAAVFGVAQRFEANANLRANMQANIQAFAADTAIVPGEVDD ERAYADDTSAGNALASSEHTPLWMSLTAPRGLQVADRQGYVIYVAAERVPNDKFRAWAEIMKDGKRVERSGLIGPRFSDA DAAHRFALDWARQWIDRECRTHEAGAGAHAGHMASQKVSAGVHTPKVGVGPITRAMPELTPTPALAAANAPSAATGNGHV PQHLNPRLLPLRRYPSDAAKDKAAERFPLVSTLISHAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47510; Mature: 47510
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVRAKAAARPGCVENNMFFDELSNDEWAQVSALVSDEPAVRLNRRGRPRAEPRIVANA CCCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCHHEEEE VLWILTTGEPWSKLPGRYPSGPTCRRRFEEWQANGTLAEVIRLLTQNGRTFAYIPEPTPP EEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCC AAPKRAPVVEAPKPRDELARGVFWKSPETWQSSVHEPGVTSGWRALAPMADITRQLAGSA CCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHCCH AVETGFVDASRADAARAPDAAAVFGVAQRFEANANLRANMQANIQAFAADTAIVPGEVDD HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCEECCCCCCC ERAYADDTSAGNALASSEHTPLWMSLTAPRGLQVADRQGYVIYVAAERVPNDKFRAWAEI CHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHH MKDGKRVERSGLIGPRFSDADAAHRFALDWARQWIDRECRTHEAGAGAHAGHMASQKVSA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC GVHTPKVGVGPITRAMPELTPTPALAAANAPSAATGNGHVPQHLNPRLLPLRRYPSDAAK CCCCCCCCCCHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEHHCCCCHHHH DKAAERFPLVSTLISHAR HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKFVRAKAAARPGCVENNMFFDELSNDEWAQVSALVSDEPAVRLNRRGRPRAEPRIVANA CCCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCHHEEEE VLWILTTGEPWSKLPGRYPSGPTCRRRFEEWQANGTLAEVIRLLTQNGRTFAYIPEPTPP EEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCC AAPKRAPVVEAPKPRDELARGVFWKSPETWQSSVHEPGVTSGWRALAPMADITRQLAGSA CCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHCCH AVETGFVDASRADAARAPDAAAVFGVAQRFEANANLRANMQANIQAFAADTAIVPGEVDD HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCEECCCCCCC ERAYADDTSAGNALASSEHTPLWMSLTAPRGLQVADRQGYVIYVAAERVPNDKFRAWAEI CHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHH MKDGKRVERSGLIGPRFSDADAAHRFALDWARQWIDRECRTHEAGAGAHAGHMASQKVSA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC GVHTPKVGVGPITRAMPELTPTPALAAANAPSAATGNGHVPQHLNPRLLPLRRYPSDAAK CCCCCCCCCCHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEHHCCCCHHHH DKAAERFPLVSTLISHAR HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA