Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475820

Identifier: 186475820

GI number: 186475820

Start: 1183125

End: 1184441

Strand: Direct

Name: 186475820

Synonym: Bphy_1055

Alternate gene names: NA

Gene position: 1183125-1184441 (Clockwise)

Preceding gene: 186475819

Following gene: 186475822

Centisome position: 34.01

GC content: 67.2

Gene sequence:

>1317_bases
ATGAAGTTCGTGCGAGCCAAAGCCGCAGCCAGGCCAGGCTGCGTGGAGAACAACATGTTTTTCGATGAGCTAAGCAATGA
CGAATGGGCGCAAGTATCGGCGCTCGTTTCTGACGAGCCAGCCGTCCGCCTGAACCGACGCGGACGGCCCCGCGCCGAAC
CCCGTATCGTGGCCAATGCCGTTCTGTGGATCCTGACTACTGGCGAGCCGTGGTCGAAGCTTCCCGGTCGCTATCCGTCA
GGCCCTACCTGCCGGCGCCGCTTCGAGGAGTGGCAAGCCAACGGCACGCTGGCCGAAGTGATCCGGCTGTTGACGCAGAA
TGGGCGCACGTTCGCCTATATCCCGGAGCCGACGCCGCCCGCCGCGCCCAAGCGGGCGCCCGTGGTCGAAGCACCGAAGC
CGCGCGATGAACTCGCGCGCGGCGTGTTCTGGAAGAGCCCGGAAACGTGGCAATCGTCCGTTCACGAGCCGGGTGTGACG
AGCGGCTGGCGTGCGCTCGCGCCGATGGCCGATATCACGCGCCAGCTCGCCGGTTCCGCTGCTGTGGAAACGGGCTTCGT
CGACGCGTCCCGCGCAGATGCCGCCCGTGCGCCGGATGCCGCCGCTGTCTTCGGCGTCGCGCAGCGTTTCGAGGCGAACG
CCAATTTGCGAGCGAACATGCAAGCGAACATTCAGGCCTTCGCGGCCGATACCGCGATCGTGCCGGGCGAGGTGGACGAT
GAGCGGGCGTATGCGGACGACACATCGGCCGGAAATGCGCTCGCGAGCAGCGAGCACACACCGCTGTGGATGAGTCTCAC
GGCGCCGCGCGGCCTGCAGGTTGCCGACCGGCAAGGCTACGTGATCTACGTCGCGGCGGAGCGGGTGCCCAACGACAAGT
TCCGCGCGTGGGCGGAAATCATGAAGGACGGCAAGCGTGTCGAGCGCTCGGGCCTGATCGGTCCGCGTTTCTCGGACGCC
GATGCGGCACACCGTTTCGCACTCGACTGGGCGCGTCAATGGATCGACCGCGAATGCCGTACGCATGAAGCGGGGGCAGG
CGCGCACGCGGGCCATATGGCCAGTCAGAAAGTGAGTGCGGGCGTGCACACGCCGAAGGTCGGCGTGGGTCCCATCACGC
GCGCGATGCCGGAACTCACGCCGACGCCGGCGCTCGCCGCGGCGAATGCGCCGTCCGCGGCAACGGGCAACGGGCATGTG
CCGCAGCATCTGAATCCGCGTCTGCTGCCGCTGCGCCGCTATCCGTCCGACGCGGCCAAGGACAAGGCGGCCGAACGCTT
TCCGCTGGTATCGACGCTGATTTCCCACGCGAGATAA

Upstream 100 bases:

>100_bases
TCCCGGTGAAATACCGCACTAACGAAGTGCGCTTTCGCGATCCCGGCGCAAGAACGTACAAGCATATTGTGCAACCGCGG
ACCCGACACGAACCGCCAAA

Downstream 100 bases:

>100_bases
CGACGATGGCGTGAACACGCCATCGTTCGACGCTGTGCTGCAACCGGTTACCAAAGGATGGCGGGTACGGATGGCTTGCA
AGTCGGTCGCGAGCCGCGCT

Product: putative transposase A-like protein

Products: NA

Alternate protein names: Transposase; IS5 Family Transposase OrfA; Transposase Protein

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MKFVRAKAAARPGCVENNMFFDELSNDEWAQVSALVSDEPAVRLNRRGRPRAEPRIVANAVLWILTTGEPWSKLPGRYPS
GPTCRRRFEEWQANGTLAEVIRLLTQNGRTFAYIPEPTPPAAPKRAPVVEAPKPRDELARGVFWKSPETWQSSVHEPGVT
SGWRALAPMADITRQLAGSAAVETGFVDASRADAARAPDAAAVFGVAQRFEANANLRANMQANIQAFAADTAIVPGEVDD
ERAYADDTSAGNALASSEHTPLWMSLTAPRGLQVADRQGYVIYVAAERVPNDKFRAWAEIMKDGKRVERSGLIGPRFSDA
DAAHRFALDWARQWIDRECRTHEAGAGAHAGHMASQKVSAGVHTPKVGVGPITRAMPELTPTPALAAANAPSAATGNGHV
PQHLNPRLLPLRRYPSDAAKDKAAERFPLVSTLISHAR

Sequences:

>Translated_438_residues
MKFVRAKAAARPGCVENNMFFDELSNDEWAQVSALVSDEPAVRLNRRGRPRAEPRIVANAVLWILTTGEPWSKLPGRYPS
GPTCRRRFEEWQANGTLAEVIRLLTQNGRTFAYIPEPTPPAAPKRAPVVEAPKPRDELARGVFWKSPETWQSSVHEPGVT
SGWRALAPMADITRQLAGSAAVETGFVDASRADAARAPDAAAVFGVAQRFEANANLRANMQANIQAFAADTAIVPGEVDD
ERAYADDTSAGNALASSEHTPLWMSLTAPRGLQVADRQGYVIYVAAERVPNDKFRAWAEIMKDGKRVERSGLIGPRFSDA
DAAHRFALDWARQWIDRECRTHEAGAGAHAGHMASQKVSAGVHTPKVGVGPITRAMPELTPTPALAAANAPSAATGNGHV
PQHLNPRLLPLRRYPSDAAKDKAAERFPLVSTLISHAR
>Mature_438_residues
MKFVRAKAAARPGCVENNMFFDELSNDEWAQVSALVSDEPAVRLNRRGRPRAEPRIVANAVLWILTTGEPWSKLPGRYPS
GPTCRRRFEEWQANGTLAEVIRLLTQNGRTFAYIPEPTPPAAPKRAPVVEAPKPRDELARGVFWKSPETWQSSVHEPGVT
SGWRALAPMADITRQLAGSAAVETGFVDASRADAARAPDAAAVFGVAQRFEANANLRANMQANIQAFAADTAIVPGEVDD
ERAYADDTSAGNALASSEHTPLWMSLTAPRGLQVADRQGYVIYVAAERVPNDKFRAWAEIMKDGKRVERSGLIGPRFSDA
DAAHRFALDWARQWIDRECRTHEAGAGAHAGHMASQKVSAGVHTPKVGVGPITRAMPELTPTPALAAANAPSAATGNGHV
PQHLNPRLLPLRRYPSDAAKDKAAERFPLVSTLISHAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47510; Mature: 47510

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFVRAKAAARPGCVENNMFFDELSNDEWAQVSALVSDEPAVRLNRRGRPRAEPRIVANA
CCCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCHHEEEE
VLWILTTGEPWSKLPGRYPSGPTCRRRFEEWQANGTLAEVIRLLTQNGRTFAYIPEPTPP
EEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCC
AAPKRAPVVEAPKPRDELARGVFWKSPETWQSSVHEPGVTSGWRALAPMADITRQLAGSA
CCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHCCH
AVETGFVDASRADAARAPDAAAVFGVAQRFEANANLRANMQANIQAFAADTAIVPGEVDD
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCEECCCCCCC
ERAYADDTSAGNALASSEHTPLWMSLTAPRGLQVADRQGYVIYVAAERVPNDKFRAWAEI
CHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHH
MKDGKRVERSGLIGPRFSDADAAHRFALDWARQWIDRECRTHEAGAGAHAGHMASQKVSA
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
GVHTPKVGVGPITRAMPELTPTPALAAANAPSAATGNGHVPQHLNPRLLPLRRYPSDAAK
CCCCCCCCCCHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEHHCCCCHHHH
DKAAERFPLVSTLISHAR
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFVRAKAAARPGCVENNMFFDELSNDEWAQVSALVSDEPAVRLNRRGRPRAEPRIVANA
CCCCHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCHHEEEE
VLWILTTGEPWSKLPGRYPSGPTCRRRFEEWQANGTLAEVIRLLTQNGRTFAYIPEPTPP
EEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCC
AAPKRAPVVEAPKPRDELARGVFWKSPETWQSSVHEPGVTSGWRALAPMADITRQLAGSA
CCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHCCH
AVETGFVDASRADAARAPDAAAVFGVAQRFEANANLRANMQANIQAFAADTAIVPGEVDD
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCEECCCCCCC
ERAYADDTSAGNALASSEHTPLWMSLTAPRGLQVADRQGYVIYVAAERVPNDKFRAWAEI
CHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHH
MKDGKRVERSGLIGPRFSDADAAHRFALDWARQWIDRECRTHEAGAGAHAGHMASQKVSA
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
GVHTPKVGVGPITRAMPELTPTPALAAANAPSAATGNGHVPQHLNPRLLPLRRYPSDAAK
CCCCCCCCCCHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEHHCCCCHHHH
DKAAERFPLVSTLISHAR
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA