| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475798
Identifier: 186475798
GI number: 186475798
Start: 1163925
End: 1164416
Strand: Reverse
Name: 186475798
Synonym: Bphy_1033
Alternate gene names: NA
Gene position: 1164416-1163925 (Counterclockwise)
Preceding gene: 186475800
Following gene: 186475796
Centisome position: 33.47
GC content: 68.29
Gene sequence:
>492_bases ATGACCGCCAGTTGCGCTTCGCGTTTCGTCCGCCTGATTTTGCTCATCGTTGCGCTAGCGTCGCTCGGCGGCTGCGCGGG GATGTTCGGTCACGATCCGCTGCGGGTGAGCGTCGCGGGAATCGAGCCCCTCGCCGGTCAAGGCCTGGAAATGCGCTTCA ACCTGAAGCTGCGCGTGCAGAATCCGAACGAATCGCCCGTCGATTTCAGCGGCGTGTCCGTCGAGCTCGATCTGAACGGC AAGCAGTTCGCGACGGGCGTCAGCGACCAGACCGGCACCGTGCCGCGCTTCGGCGAGACGGTGATCGGCGTGCCGCTCAC GGTGCCCGCCTTCGCTGCCGTGCGCCAGGCCTTCGCATTCGCCGACAGCGCGCAGTCGGGCCAGTTGCCCTATGTGCTGC GCGGCCGGCTCGCGGGGGGCATCACGGGCGGCACGCGTTTCATCGATCAGGGCACGCTGTCGCTGCCGGCGGGCGAGGTC GGCGGTCTGTAG
Upstream 100 bases:
>100_bases ATCGAGAAGGCGTCGCGCGCTGCGTCCGCTTCTTCGCGCCGCGCCGCTAGAATTCATACGATACGCCCGACTCGGGCTTT TTCCCCGAAGGGACACGACC
Downstream 100 bases:
>100_bases CGACAGCCGGCCCATCGCCGGTTATGTGACGCGGCAAACGCCACCCGTCAATGATTTGCGTTGCCTGGTCCCGGCGGCTC GGGCGGCCTCGGCGCGCTAT
Product: water stress/hypersensitive response domain-containing protein
Products: NA
Alternate protein names: Water Stress And Hypersensitive Response Domain Protein; Water Stress/Hypersensitive Response Protein
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTASCASRFVRLILLIVALASLGGCAGMFGHDPLRVSVAGIEPLAGQGLEMRFNLKLRVQNPNESPVDFSGVSVELDLNG KQFATGVSDQTGTVPRFGETVIGVPLTVPAFAAVRQAFAFADSAQSGQLPYVLRGRLAGGITGGTRFIDQGTLSLPAGEV GGL
Sequences:
>Translated_163_residues MTASCASRFVRLILLIVALASLGGCAGMFGHDPLRVSVAGIEPLAGQGLEMRFNLKLRVQNPNESPVDFSGVSVELDLNG KQFATGVSDQTGTVPRFGETVIGVPLTVPAFAAVRQAFAFADSAQSGQLPYVLRGRLAGGITGGTRFIDQGTLSLPAGEV GGL >Mature_162_residues TASCASRFVRLILLIVALASLGGCAGMFGHDPLRVSVAGIEPLAGQGLEMRFNLKLRVQNPNESPVDFSGVSVELDLNGK QFATGVSDQTGTVPRFGETVIGVPLTVPAFAAVRQAFAFADSAQSGQLPYVLRGRLAGGITGGTRFIDQGTLSLPAGEVG GL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16833; Mature: 16701
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASCASRFVRLILLIVALASLGGCAGMFGHDPLRVSVAGIEPLAGQGLEMRFNLKLRVQ CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEE NPNESPVDFSGVSVELDLNGKQFATGVSDQTGTVPRFGETVIGVPLTVPAFAAVRQAFAF CCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH ADSAQSGQLPYVLRGRLAGGITGGTRFIDQGTLSLPAGEVGGL HCCCCCCCCCCEEECCCCCCCCCCCEEECCCCEECCCCCCCCC >Mature Secondary Structure TASCASRFVRLILLIVALASLGGCAGMFGHDPLRVSVAGIEPLAGQGLEMRFNLKLRVQ CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEE NPNESPVDFSGVSVELDLNGKQFATGVSDQTGTVPRFGETVIGVPLTVPAFAAVRQAFAF CCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH ADSAQSGQLPYVLRGRLAGGITGGTRFIDQGTLSLPAGEVGGL HCCCCCCCCCCEEECCCCCCCCCCCEEECCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA