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The map label for this gene is dadA [H]

Identifier: 186475786

GI number: 186475786

Start: 1147046

End: 1148347

Strand: Reverse

Name: dadA [H]

Synonym: Bphy_1021

Alternate gene names: 186475786

Gene position: 1148347-1147046 (Counterclockwise)

Preceding gene: 186475788

Following gene: 186475785

Centisome position: 33.01

GC content: 64.21

Gene sequence:

>1302_bases
ATGGATGTCATCGTCATTGGCGGCGGGATCGTCGGCGTCGCCACCGCCTATCAGCTTCGCGCGGCCGGTCACCGGGTGTG
CGTCGTCGAACGGCACGCCACGGTCGCGCAGGGCGCCACTTATGGACATGGTGGCACGCTGCTGCCCACGCCGCTCGACG
TCTGGTTCGGACCGACCTTCATGCAGCACCGCCAGTCGTCCAGAAGCGGCGTCATCAAAAAAACGGGTTTCAACGGGCCG
GTTCGCGATTTCATCCGCAGGCTGTCGGCCTTAACCGAACCCGAGGCATTCAAGAAGCAATATGCGCTGCTGCGTCCTCT
GATCGAATCGGCGCGCGAATCGCTCGACGAAATCGAGCATCACTTCAACCTGGAATTCGAACAGACGAAAGGCCAGCTGT
ATCTGGTGCGCAGCCAGCAGGATTGGGAACACACCCAGCCTGCCCTCGACCTGCTCCGACAGTTCGAGGTGCCTCATCAC
GTGCTGAGTCCGCAGGAATGTCAAGCCATCGAGCATTCCATTCCGCTCGATCCGCATTTCGCAGGCGGCGTGCTGTTCGA
CGACGAAGGCACGGCGAATTGTCCGCTGTTCGCGAAGCTAATCAAACAGACGCTCGACTCGCAAGGCGGCGTGCAATTCC
AGTGCGGGCGCGAAGTGACGGGCATTCGTCTTGATAATCAGCGCGCTGCCGTCGAACTGGCGCCCGCGAATGGCGAATCG
CTGCGTTCGCGCGAAGTCGATGTGATCAGCGCAGATGCCGTCGTCGTCGCGGCGGGCGTGGGCAGTCTTGCATTGCTGGA
CAAGCTCGGCCTGCATCTGCCATTGCATCCGCTGCGGCTGCATAACCTCGTCGCACCCGTTGCGCGCGAGGAATTCGCGC
CGCATACGACTGTGATCGATGCCGTCAAGCGGATCACGATCACGCGCAGCAATCACAGGCTGCGCATCGCAGGCGGCGCG
GTGCTGCAAAGCGCGACCCAGACGCGCCAGCCGCTGCCCGAGTCGCTCACGAAGGACGCCCTGGCGCTGCTCAGCCAGGC
GACGCACGACTGGGTGCCAGGTGCCGCGCGCATTTCGGCGGCGCTGCCGTGGGAGGGTGTGAAGCTGCTGTCGCCGGACG
GCCTGCCCGTGACGGGCAATGCGCTGCATCCACGGCTCTATGTCAACGCAGCGCACGGTCCCGTCGGCTGGGGTCTCGCG
TGCGGCTCGGGCAAGCTGATCGCAAGCCTCGTGTCCGGCGTACCCTCGGACCTGCCGTCCGACACAATTGTGGCGCTTCG
CCCCGAGCGCTTCAACGCCTGA

Upstream 100 bases:

>100_bases
CCGCCTTTCATCAGATCGGCGCAGTATCGGCTGTCGCGCCGCGCCGCATGTCGCGAAATACGCCTGGCCCCACGCGTGCC
GACGGCAATACGAATTAATC

Downstream 100 bases:

>100_bases
GTACGCAGATCCGGCATGGGACGGTCATTCGTCCTATGCCTTAGGTGGTACTGGCATCGACACGCGCAATGCCACTACCA
TGGGCATACCGTGTTGCTCT

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MDVIVIGGGIVGVATAYQLRAAGHRVCVVERHATVAQGATYGHGGTLLPTPLDVWFGPTFMQHRQSSRSGVIKKTGFNGP
VRDFIRRLSALTEPEAFKKQYALLRPLIESARESLDEIEHHFNLEFEQTKGQLYLVRSQQDWEHTQPALDLLRQFEVPHH
VLSPQECQAIEHSIPLDPHFAGGVLFDDEGTANCPLFAKLIKQTLDSQGGVQFQCGREVTGIRLDNQRAAVELAPANGES
LRSREVDVISADAVVVAAGVGSLALLDKLGLHLPLHPLRLHNLVAPVAREEFAPHTTVIDAVKRITITRSNHRLRIAGGA
VLQSATQTRQPLPESLTKDALALLSQATHDWVPGAARISAALPWEGVKLLSPDGLPVTGNALHPRLYVNAAHGPVGWGLA
CGSGKLIASLVSGVPSDLPSDTIVALRPERFNA

Sequences:

>Translated_433_residues
MDVIVIGGGIVGVATAYQLRAAGHRVCVVERHATVAQGATYGHGGTLLPTPLDVWFGPTFMQHRQSSRSGVIKKTGFNGP
VRDFIRRLSALTEPEAFKKQYALLRPLIESARESLDEIEHHFNLEFEQTKGQLYLVRSQQDWEHTQPALDLLRQFEVPHH
VLSPQECQAIEHSIPLDPHFAGGVLFDDEGTANCPLFAKLIKQTLDSQGGVQFQCGREVTGIRLDNQRAAVELAPANGES
LRSREVDVISADAVVVAAGVGSLALLDKLGLHLPLHPLRLHNLVAPVAREEFAPHTTVIDAVKRITITRSNHRLRIAGGA
VLQSATQTRQPLPESLTKDALALLSQATHDWVPGAARISAALPWEGVKLLSPDGLPVTGNALHPRLYVNAAHGPVGWGLA
CGSGKLIASLVSGVPSDLPSDTIVALRPERFNA
>Mature_433_residues
MDVIVIGGGIVGVATAYQLRAAGHRVCVVERHATVAQGATYGHGGTLLPTPLDVWFGPTFMQHRQSSRSGVIKKTGFNGP
VRDFIRRLSALTEPEAFKKQYALLRPLIESARESLDEIEHHFNLEFEQTKGQLYLVRSQQDWEHTQPALDLLRQFEVPHH
VLSPQECQAIEHSIPLDPHFAGGVLFDDEGTANCPLFAKLIKQTLDSQGGVQFQCGREVTGIRLDNQRAAVELAPANGES
LRSREVDVISADAVVVAAGVGSLALLDKLGLHLPLHPLRLHNLVAPVAREEFAPHTTVIDAVKRITITRSNHRLRIAGGA
VLQSATQTRQPLPESLTKDALALLSQATHDWVPGAARISAALPWEGVKLLSPDGLPVTGNALHPRLYVNAAHGPVGWGLA
CGSGKLIASLVSGVPSDLPSDTIVALRPERFNA

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=442, Percent_Identity=27.8280542986425, Blast_Score=178, Evalue=7e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46770; Mature: 46770

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVIVIGGGIVGVATAYQLRAAGHRVCVVERHATVAQGATYGHGGTLLPTPLDVWFGPTF
CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHCCCEECCCCCCCCCCHHHHCCCHH
MQHRQSSRSGVIKKTGFNGPVRDFIRRLSALTEPEAFKKQYALLRPLIESARESLDEIEH
HHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HFNLEFEQTKGQLYLVRSQQDWEHTQPALDLLRQFEVPHHVLSPQECQAIEHSIPLDPHF
HCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHCCCCCCCC
AGGVLFDDEGTANCPLFAKLIKQTLDSQGGVQFQCGREVTGIRLDNQRAAVELAPANGES
CCCEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCEEEEEECCCCCH
LRSREVDVISADAVVVAAGVGSLALLDKLGLHLPLHPLRLHNLVAPVAREEFAPHTTVID
HHCCCCEEEECCEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
AVKRITITRSNHRLRIAGGAVLQSATQTRQPLPESLTKDALALLSQATHDWVPGAARISA
HHHHEEEEECCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHEEE
ALPWEGVKLLSPDGLPVTGNALHPRLYVNAAHGPVGWGLACGSGKLIASLVSGVPSDLPS
CCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCHHHHHHHHCCCCCCCC
DTIVALRPERFNA
CCEEEECCHHCCC
>Mature Secondary Structure
MDVIVIGGGIVGVATAYQLRAAGHRVCVVERHATVAQGATYGHGGTLLPTPLDVWFGPTF
CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHCCCEECCCCCCCCCCHHHHCCCHH
MQHRQSSRSGVIKKTGFNGPVRDFIRRLSALTEPEAFKKQYALLRPLIESARESLDEIEH
HHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HFNLEFEQTKGQLYLVRSQQDWEHTQPALDLLRQFEVPHHVLSPQECQAIEHSIPLDPHF
HCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHCCCCCCCC
AGGVLFDDEGTANCPLFAKLIKQTLDSQGGVQFQCGREVTGIRLDNQRAAVELAPANGES
CCCEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCEEEEEECCCCCH
LRSREVDVISADAVVVAAGVGSLALLDKLGLHLPLHPLRLHNLVAPVAREEFAPHTTVID
HHCCCCEEEECCEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
AVKRITITRSNHRLRIAGGAVLQSATQTRQPLPESLTKDALALLSQATHDWVPGAARISA
HHHHEEEEECCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHEEE
ALPWEGVKLLSPDGLPVTGNALHPRLYVNAAHGPVGWGLACGSGKLIASLVSGVPSDLPS
CCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCHHHHHHHHCCCCCCCC
DTIVALRPERFNA
CCEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA