| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is ssuC [H]
Identifier: 186475722
GI number: 186475722
Start: 1069299
End: 1070123
Strand: Direct
Name: ssuC [H]
Synonym: Bphy_0957
Alternate gene names: 186475722
Gene position: 1069299-1070123 (Clockwise)
Preceding gene: 186475721
Following gene: 186475724
Centisome position: 30.73
GC content: 59.15
Gene sequence:
>825_bases ATGTGGAAAGCATTGCGCCCGAATCGTACCAACCTCGTGATGTGGCAATGGCTGATGCTGGTGCTGTGCTTCGTGCTCTG GTACGTGCTGACCAGCCCGACGCTGTTGCCCGCATTCTACTTCGACGATCCGAACAAGGCCGCGTTCTTCTTCGGCGAGC CTCAGAAAGTTCTTGTGCGAATCTGGGAATGGTTCGCGTCTGGCGAAATTTATCTGCATCTGTGGATTACGCTGATCGAA ACGGTGCTCGCGTTCGCACTCGGAACGGTGCTCGGGCTGGGCGTCGGCTTGTGGCTTGCGCTGTCGCCGCTCGCGAGCGC GCTGTTCGATCCGTACATCAAGGCCGCGAACTCCATGCCGCGTGTGATCCTCGCGCCGATTTTCGGTGTGTGGTTCGGTC TCGGCATCTGGTCGAAGGTCGCGCTCGGCGTGACGCTCGTGTTCTTCATCGTGTTCTTCAATGTCTATCAAGGCGTGAAG GAAGTGAGCCCCGTCGTGCTCGCGAACGCGCGCATGCTCGGCGCGAACCGCAAGCAGTTGCTGCGGGCCGTCTATCTGCC TAGCGCGATGAGCTGGGTGTTTTCGAGTCTGCATACGTCTGTTGGGTTGGCGTTCGTCGGCTCGGTGGTCGGCGAGTATC TCGGCTCGGCGCGTGGCGTCGGCTACCTGATCCTGCAAGCCGAAGGCACGTTTGATATCAACACCGTGTTCGCCGGGATT CTCGTGTTGACGGCCTTCGCGCTAATACTCGATGCAATCGTCGGCGTCCTTGAGAAGCGTCTGATGAAGTGGCAACCCAA GAGCGGCGAGACGGAAAAAATCTGA
Upstream 100 bases:
>100_bases CGTTTCGTCGAACTGCATGCTCAGATCTGGAGCGTGTTGCGCGATGAGGTTCTCAAGGGATATCAGCAGCAGTTGACCGT CGCGCCGGAGGGCAACTGAA
Downstream 100 bases:
>100_bases CTGCGTTCGATGGCGGGTAACAAACGGCGCGTGGCCTCGCTAAGGCCACGCGCCGTTTTGCTTTTCGGGGCAACACAGTG CTCAGGGCGTGATGACGATC
Product: binding-protein-dependent transport systems inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MWKALRPNRTNLVMWQWLMLVLCFVLWYVLTSPTLLPAFYFDDPNKAAFFFGEPQKVLVRIWEWFASGEIYLHLWITLIE TVLAFALGTVLGLGVGLWLALSPLASALFDPYIKAANSMPRVILAPIFGVWFGLGIWSKVALGVTLVFFIVFFNVYQGVK EVSPVVLANARMLGANRKQLLRAVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLGSARGVGYLILQAEGTFDINTVFAGI LVLTAFALILDAIVGVLEKRLMKWQPKSGETEKI
Sequences:
>Translated_274_residues MWKALRPNRTNLVMWQWLMLVLCFVLWYVLTSPTLLPAFYFDDPNKAAFFFGEPQKVLVRIWEWFASGEIYLHLWITLIE TVLAFALGTVLGLGVGLWLALSPLASALFDPYIKAANSMPRVILAPIFGVWFGLGIWSKVALGVTLVFFIVFFNVYQGVK EVSPVVLANARMLGANRKQLLRAVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLGSARGVGYLILQAEGTFDINTVFAGI LVLTAFALILDAIVGVLEKRLMKWQPKSGETEKI >Mature_274_residues MWKALRPNRTNLVMWQWLMLVLCFVLWYVLTSPTLLPAFYFDDPNKAAFFFGEPQKVLVRIWEWFASGEIYLHLWITLIE TVLAFALGTVLGLGVGLWLALSPLASALFDPYIKAANSMPRVILAPIFGVWFGLGIWSKVALGVTLVFFIVFFNVYQGVK EVSPVVLANARMLGANRKQLLRAVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLGSARGVGYLILQAEGTFDINTVFAGI LVLTAFALILDAIVGVLEKRLMKWQPKSGETEKI
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=231, Percent_Identity=29.4372294372294, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI87081802, Length=214, Percent_Identity=26.6355140186916, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1789033, Length=163, Percent_Identity=28.2208588957055, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30473; Mature: 30473
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKALRPNRTNLVMWQWLMLVLCFVLWYVLTSPTLLPAFYFDDPNKAAFFFGEPQKVLVR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCEEEEECCHHHHHHH IWEWFASGEIYLHLWITLIETVLAFALGTVLGLGVGLWLALSPLASALFDPYIKAANSMP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RVILAPIFGVWFGLGIWSKVALGVTLVFFIVFFNVYQGVKEVSPVVLANARMLGANRKQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHH LRAVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLGSARGVGYLILQAEGTFDINTVFAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHH LVLTAFALILDAIVGVLEKRLMKWQPKSGETEKI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MWKALRPNRTNLVMWQWLMLVLCFVLWYVLTSPTLLPAFYFDDPNKAAFFFGEPQKVLVR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCEEEEECCHHHHHHH IWEWFASGEIYLHLWITLIETVLAFALGTVLGLGVGLWLALSPLASALFDPYIKAANSMP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RVILAPIFGVWFGLGIWSKVALGVTLVFFIVFFNVYQGVKEVSPVVLANARMLGANRKQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHH LRAVYLPSAMSWVFSSLHTSVGLAFVGSVVGEYLGSARGVGYLILQAEGTFDINTVFAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHH LVLTAFALILDAIVGVLEKRLMKWQPKSGETEKI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]