| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475629
Identifier: 186475629
GI number: 186475629
Start: 964140
End: 966008
Strand: Reverse
Name: 186475629
Synonym: Bphy_0864
Alternate gene names: NA
Gene position: 966008-964140 (Counterclockwise)
Preceding gene: 186475630
Following gene: 186475625
Centisome position: 27.77
GC content: 65.12
Gene sequence:
>1869_bases ATGACCGCCCGCCCCATGAAACGGGATCACCAGTCAGAAGGCGCGTTGTCCGCGACTCGCCCACGCCTCGCCGATTTGCG CTCGCCTCGCGCGATGGCGACTGCGTGCGTAATCGTGCCGCTGCTGTTCGGACTGTATTCGCTGCTGCTCGGCGCCGACG CAAACTGGGACCTGTACAACTATCACCTGTACAACCCGTTTGCGTGGCTGCACGGCAAGCTGCAGACCGATCTCGCGCCA GCAGGTATGCAAACGTATTTCAACCCGTTGCTCGATACCGCTCTGTATCTGCTGAACACGCATCTGCCGTCGCGCGTCGT CGGTTTTGCGCTGGGCGTGCTGCACGGGCTAGCGTTCGTGCTAATCGTCGCGATCGCGCGTGAAGTATGGCCCTCTGCAA ACAGCACAGACCGCTACCGCCTGCCCGTTCTGATCGCCGCGGCGGGCTGTCTCACCGCGAACTTCCTGTCGGGCCTCGGC AATTCGATGGGCGACGACACGACGGCACTGCTCGTGCTCGGCGGCCTGCTCGTCGTGCTGTCGAACTGGCGCCGCCTGAG TATGCGCACAGCCGGCGCATTTGCCGCATCGATCGTGAGCGGCCTGCTCGTCGGTTTTGCGACCGGCCTCAAGCTCACCA ACGCCGTGTTCGCCGTCGCACTCTGCCTGAGCCTCCTGAGCCATCCCGGCACGCTCGCCTCGCGGGTGCGCATCGCGTTC CTGTTCGGCATCGGCGTGCTGGTCGGCATGGCCGCGACGACGGGGTTCTGGATGCTGCATCTGTGGCAGCAGTTCGGTAA TCCGCTGTATCCGCAGTTCGGCAAATTTTTTCCGAATCCCCTGACGACGTCCGGCGTGCAAGGCGACATGCGCTGGTTGC CGCGCAATGCCATAGAGATGCTGCTGTGGCCGTTCATCATCGCCGCGGATTCGAGACGGGTCGGCGAGACCCCCATCCGG CAGATCATCTGGCCGATTGTCTACATCGTGTTCGTCTGGTGGGCGCTCATGCGGATCACGCAGCGCATCAAAGGCCAGCG GCCGGAAGGTCTCGAACCGAAGCAACGGCTCGTCGTGCTGTTCGTCGCGCTGGGCTTCGTCGTGTGGATGAAGCTCTTTA GCATCTATCGCTACATCGTGCCCATCGAGGTGCTCGCACCGATGGTGCTCGTCCTGCTGATCGACCGGCTGCTGCCCGCC CGTATCGCGCGTCGCGCGTCGGCGTGGCTGCTGATCGCCGCGACGGCTGTCGTCGTGACGGGCGGCGCGCGCACGTGGGG CCACGAAGGCTGGGCCGATCCGCTCTATCACGCACAGCTGCCGCCGCTGGAGCAACCGGCGCGGACGACGGTCGTCATCA AGAGCGTGACGTCCGGCTGGGCCTGGATTGCGACGCGTTTCCCCGACACGGTCGCGTTCACGCAGATCGACAGCAGCTTT CCTGCGAGCGACGCGTTTCGCTCACGCATCGTGAGCCTCGTCCGTGAACGGGGCGGTCCGTCGTTCGCGCTGATCGACGG CGCGCACAACTGGCGCGAAGACAGCGTGAACGGCATCAACGACGTTGCCGCGACGCTCGGACTCACGCGCTCGACGCGCG GCTGCAATGCGTTGCACTGGGCGCTGTCGAAGCTGCGTCTGCACGCTGCGCTCGAAGGTCCGCGCGACGGGTCGGAACAG TGCCGGCTTGGCCTGCGCGACGATGACCGTATCGATCTCGCTGCCCGCAATCGCCAACTGGCAGCCGAAGCCGCCGCCGC ATTCGACCGTGCCGGATTCAGTCTCGACGCGGGCTCGTGCAAGCCGTATGAAGCAGGGATCGGCAAAGGTGTACTGGCGT GGCAGTGGTGCCGCATCAGCCCGCATTGA
Upstream 100 bases:
>100_bases AAAGCGCGCTGCTGCCGCTCATCGCTGTCGCGGTCGGATCGCTCGCGGGCATGACGGTCAACTTCGTCAGCGCGAAGCTG TGGGTGTTCAAGGCCCGCTC
Downstream 100 bases:
>100_bases AAGCGAAATGGACATCGCGCGGCGCTCGCCCGTGAACCGGCAGTCCGCGCTTACGACGTGGCCGCGCCGATTCCGCGCGC CATTCCCGATGCGGCGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 622; Mature: 621
Protein sequence:
>622_residues MTARPMKRDHQSEGALSATRPRLADLRSPRAMATACVIVPLLFGLYSLLLGADANWDLYNYHLYNPFAWLHGKLQTDLAP AGMQTYFNPLLDTALYLLNTHLPSRVVGFALGVLHGLAFVLIVAIAREVWPSANSTDRYRLPVLIAAAGCLTANFLSGLG NSMGDDTTALLVLGGLLVVLSNWRRLSMRTAGAFAASIVSGLLVGFATGLKLTNAVFAVALCLSLLSHPGTLASRVRIAF LFGIGVLVGMAATTGFWMLHLWQQFGNPLYPQFGKFFPNPLTTSGVQGDMRWLPRNAIEMLLWPFIIAADSRRVGETPIR QIIWPIVYIVFVWWALMRITQRIKGQRPEGLEPKQRLVVLFVALGFVVWMKLFSIYRYIVPIEVLAPMVLVLLIDRLLPA RIARRASAWLLIAATAVVVTGGARTWGHEGWADPLYHAQLPPLEQPARTTVVIKSVTSGWAWIATRFPDTVAFTQIDSSF PASDAFRSRIVSLVRERGGPSFALIDGAHNWREDSVNGINDVAATLGLTRSTRGCNALHWALSKLRLHAALEGPRDGSEQ CRLGLRDDDRIDLAARNRQLAAEAAAAFDRAGFSLDAGSCKPYEAGIGKGVLAWQWCRISPH
Sequences:
>Translated_622_residues MTARPMKRDHQSEGALSATRPRLADLRSPRAMATACVIVPLLFGLYSLLLGADANWDLYNYHLYNPFAWLHGKLQTDLAP AGMQTYFNPLLDTALYLLNTHLPSRVVGFALGVLHGLAFVLIVAIAREVWPSANSTDRYRLPVLIAAAGCLTANFLSGLG NSMGDDTTALLVLGGLLVVLSNWRRLSMRTAGAFAASIVSGLLVGFATGLKLTNAVFAVALCLSLLSHPGTLASRVRIAF LFGIGVLVGMAATTGFWMLHLWQQFGNPLYPQFGKFFPNPLTTSGVQGDMRWLPRNAIEMLLWPFIIAADSRRVGETPIR QIIWPIVYIVFVWWALMRITQRIKGQRPEGLEPKQRLVVLFVALGFVVWMKLFSIYRYIVPIEVLAPMVLVLLIDRLLPA RIARRASAWLLIAATAVVVTGGARTWGHEGWADPLYHAQLPPLEQPARTTVVIKSVTSGWAWIATRFPDTVAFTQIDSSF PASDAFRSRIVSLVRERGGPSFALIDGAHNWREDSVNGINDVAATLGLTRSTRGCNALHWALSKLRLHAALEGPRDGSEQ CRLGLRDDDRIDLAARNRQLAAEAAAAFDRAGFSLDAGSCKPYEAGIGKGVLAWQWCRISPH >Mature_621_residues TARPMKRDHQSEGALSATRPRLADLRSPRAMATACVIVPLLFGLYSLLLGADANWDLYNYHLYNPFAWLHGKLQTDLAPA GMQTYFNPLLDTALYLLNTHLPSRVVGFALGVLHGLAFVLIVAIAREVWPSANSTDRYRLPVLIAAAGCLTANFLSGLGN SMGDDTTALLVLGGLLVVLSNWRRLSMRTAGAFAASIVSGLLVGFATGLKLTNAVFAVALCLSLLSHPGTLASRVRIAFL FGIGVLVGMAATTGFWMLHLWQQFGNPLYPQFGKFFPNPLTTSGVQGDMRWLPRNAIEMLLWPFIIAADSRRVGETPIRQ IIWPIVYIVFVWWALMRITQRIKGQRPEGLEPKQRLVVLFVALGFVVWMKLFSIYRYIVPIEVLAPMVLVLLIDRLLPAR IARRASAWLLIAATAVVVTGGARTWGHEGWADPLYHAQLPPLEQPARTTVVIKSVTSGWAWIATRFPDTVAFTQIDSSFP ASDAFRSRIVSLVRERGGPSFALIDGAHNWREDSVNGINDVAATLGLTRSTRGCNALHWALSKLRLHAALEGPRDGSEQC RLGLRDDDRIDLAARNRQLAAEAAAAFDRAGFSLDAGSCKPYEAGIGKGVLAWQWCRISPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68275; Mature: 68144
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARPMKRDHQSEGALSATRPRLADLRSPRAMATACVIVPLLFGLYSLLLGADANWDLYN CCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE YHLYNPFAWLHGKLQTDLAPAGMQTYFNPLLDTALYLLNTHLPSRVVGFALGVLHGLAFV EEEECCHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LIVAIAREVWPSANSTDRYRLPVLIAAAGCLTANFLSGLGNSMGDDTTALLVLGGLLVVL HHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH SNWRRLSMRTAGAFAASIVSGLLVGFATGLKLTNAVFAVALCLSLLSHPGTLASRVRIAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LFGIGVLVGMAATTGFWMLHLWQQFGNPLYPQFGKFFPNPLTTSGVQGDMRWLPRNAIEM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHCCHHHHHH LLWPFIIAADSRRVGETPIRQIIWPIVYIVFVWWALMRITQRIKGQRPEGLEPKQRLVVL HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH FVALGFVVWMKLFSIYRYIVPIEVLAPMVLVLLIDRLLPARIARRASAWLLIAATAVVVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE GGARTWGHEGWADPLYHAQLPPLEQPARTTVVIKSVTSGWAWIATRFPDTVAFTQIDSSF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCCEEEEECCCCCEEEEECCCCC PASDAFRSRIVSLVRERGGPSFALIDGAHNWREDSVNGINDVAATLGLTRSTRGCNALHW CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHH ALSKLRLHAALEGPRDGSEQCRLGLRDDDRIDLAARNRQLAAEAAAAFDRAGFSLDAGSC HHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC KPYEAGIGKGVLAWQWCRISPH CCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure TARPMKRDHQSEGALSATRPRLADLRSPRAMATACVIVPLLFGLYSLLLGADANWDLYN CCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE YHLYNPFAWLHGKLQTDLAPAGMQTYFNPLLDTALYLLNTHLPSRVVGFALGVLHGLAFV EEEECCHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LIVAIAREVWPSANSTDRYRLPVLIAAAGCLTANFLSGLGNSMGDDTTALLVLGGLLVVL HHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH SNWRRLSMRTAGAFAASIVSGLLVGFATGLKLTNAVFAVALCLSLLSHPGTLASRVRIAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LFGIGVLVGMAATTGFWMLHLWQQFGNPLYPQFGKFFPNPLTTSGVQGDMRWLPRNAIEM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHCCHHHHHH LLWPFIIAADSRRVGETPIRQIIWPIVYIVFVWWALMRITQRIKGQRPEGLEPKQRLVVL HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH FVALGFVVWMKLFSIYRYIVPIEVLAPMVLVLLIDRLLPARIARRASAWLLIAATAVVVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE GGARTWGHEGWADPLYHAQLPPLEQPARTTVVIKSVTSGWAWIATRFPDTVAFTQIDSSF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCCEEEEECCCCCEEEEECCCCC PASDAFRSRIVSLVRERGGPSFALIDGAHNWREDSVNGINDVAATLGLTRSTRGCNALHW CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHH ALSKLRLHAALEGPRDGSEQCRLGLRDDDRIDLAARNRQLAAEAAAAFDRAGFSLDAGSC HHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC KPYEAGIGKGVLAWQWCRISPH CCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA