| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is otsA [H]
Identifier: 186475624
GI number: 186475624
Start: 957294
End: 958730
Strand: Direct
Name: otsA [H]
Synonym: Bphy_0859
Alternate gene names: 186475624
Gene position: 957294-958730 (Clockwise)
Preceding gene: 186475623
Following gene: 186475626
Centisome position: 27.51
GC content: 64.79
Gene sequence:
>1437_bases ATGAGCCGATTGATCATCGTATCGAACCGCGTCGCGCCAATTTCGGAAGGCGGCCCGGCGGCGGGCGGCCTGGCCGTCGG CGTATACGACGCATTGAAGGAAACGGGCGGCATGTGGTTTGGCTGGAGCGGCGAGGTGCTCGGGTCCGGCCAGCCGCAGA TGAGGCTCGAAGAGCGCGGCCCCGTCACGTTCGCGACCATCGGCCTCGTGCGCCGCGATTACGACCAGTACTACCGCGGT TTTTCGAACGCAACGCTGTGGCCCGCATTTCACTATCGGCCGGATCTGCTGCAGTTCGACCGGCACGATTTCGAAGGCTA TTGCCGCGTGAATACGTGGCTCGCGCAACAGCTTGTGCCGCTACTACGCGACGACGACGTCATCTGGGTTCACGACTACC ACCTGATTCCGTTCGCGCAGGCGTTGCGCGCGGCGGGCGTGAAGAACCGCATCGGCTTCTTTCTGCACATTCCGTTTCCG GCGGCGCAGGTGCTGCTGGCCGTGCCGCCGCATCGCGCGCTGGTCGAGGCGCTTTGTTCGTTCGATCTGCTCGGCTTCCA GACAAAGCCCGATTTACGGGCCTTCTGCGACTACATCGTCAACGAAGCGGATGGATGGGCGGAAGCACAGGCGCCGGGGC GGAGCGCTGCGCCGACCGTCGTGCATGCGTTCGGCCGCACGCTGCGCGCGGCCGCATATCCGATCGGCGTGTATCCCGAC GAGATAGCCGAGCTGGCGAAAGCGGGCGAGGGCGACAAGCCCGTGCGTACGATCGAGGCGACGCTGCATGCGCGCAAGCT GATCATGAGCGTGGACCGGCTCGATTACTCGAAAGGGCTGGTCGAGCGCTTCCGCGCATTCGAGCGGCTGCTGGAGCACT CGCCTTCTTATCGCGACAAGGTATCGTTCCTGCAGATCGCGCCGCCGACGCGTTCGGATCTACACGCGTATCAGGAAATC AGATTGCAGCTGGAAGGCGAATCCGGGCGCATCAACGGACGCTTCGCGGAGCTCGACTGGACGCCGATCCGCTACATCCA TCGGCAGTACGAGCGGCCCGTGCTGGCGGCGCTGTTCCGCACCGCGCACGTCGGCTACGTGACGCCGCTGCGCGACGGGA TGAATCTCGTCGCGAAGGAATATGTGTCGGCTCAAGACCCGGAAGACCCCGGCGTGCTGGTGCTGTCGCGCTTTGCGGGC GCTGCGCAGGAGCTGACGGGCGCGCTGATCGTCAATCCTGTCGATATCGACGGGATGGCCGACGCGCTCGGCACGGCGCT GTCGATGCCGCTCGCCGAACGCAAGGCGCGCTACGTCGACATGATGGCGCAACTGCGTGAGAACAACGTGTCCGTGTGGC GCGACAATTTCATGCGCGATCTGCAGCAGATGCCGGATCCGCTGGCGCAGTCGATCAGGGAAACGGCGCAAGGGTGA
Upstream 100 bases:
>100_bases CTGCTCGCGTGGCTGTCCGAAATCGTCGCGGCGGCACGCAGCGCATGACCACGACCGTTCATCCGCGCCGTGCCCTTGTT CAGCACGGAAGTCACGCAAC
Downstream 100 bases:
>100_bases CGTCCCGCTTGCACGCCGATTAAAAAAGCCGCTTCGATCGAAGCGGCTTTTTTGTTGCGGCCGTGTCCGTCCAGACGGGC GCGCCGTAGGTCACGCCACG
Product: alpha,alpha-trehalose-phosphate synthase
Products: NA
Alternate protein names: Osmoregulatory trehalose synthesis protein A; Trehalose-6-phosphate synthase; UDP-glucose-glucosephosphate glucosyltransferase [H]
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MSRLIIVSNRVAPISEGGPAAGGLAVGVYDALKETGGMWFGWSGEVLGSGQPQMRLEERGPVTFATIGLVRRDYDQYYRG FSNATLWPAFHYRPDLLQFDRHDFEGYCRVNTWLAQQLVPLLRDDDVIWVHDYHLIPFAQALRAAGVKNRIGFFLHIPFP AAQVLLAVPPHRALVEALCSFDLLGFQTKPDLRAFCDYIVNEADGWAEAQAPGRSAAPTVVHAFGRTLRAAAYPIGVYPD EIAELAKAGEGDKPVRTIEATLHARKLIMSVDRLDYSKGLVERFRAFERLLEHSPSYRDKVSFLQIAPPTRSDLHAYQEI RLQLEGESGRINGRFAELDWTPIRYIHRQYERPVLAALFRTAHVGYVTPLRDGMNLVAKEYVSAQDPEDPGVLVLSRFAG AAQELTGALIVNPVDIDGMADALGTALSMPLAERKARYVDMMAQLRENNVSVWRDNFMRDLQQMPDPLAQSIRETAQG
Sequences:
>Translated_478_residues MSRLIIVSNRVAPISEGGPAAGGLAVGVYDALKETGGMWFGWSGEVLGSGQPQMRLEERGPVTFATIGLVRRDYDQYYRG FSNATLWPAFHYRPDLLQFDRHDFEGYCRVNTWLAQQLVPLLRDDDVIWVHDYHLIPFAQALRAAGVKNRIGFFLHIPFP AAQVLLAVPPHRALVEALCSFDLLGFQTKPDLRAFCDYIVNEADGWAEAQAPGRSAAPTVVHAFGRTLRAAAYPIGVYPD EIAELAKAGEGDKPVRTIEATLHARKLIMSVDRLDYSKGLVERFRAFERLLEHSPSYRDKVSFLQIAPPTRSDLHAYQEI RLQLEGESGRINGRFAELDWTPIRYIHRQYERPVLAALFRTAHVGYVTPLRDGMNLVAKEYVSAQDPEDPGVLVLSRFAG AAQELTGALIVNPVDIDGMADALGTALSMPLAERKARYVDMMAQLRENNVSVWRDNFMRDLQQMPDPLAQSIRETAQG >Mature_477_residues SRLIIVSNRVAPISEGGPAAGGLAVGVYDALKETGGMWFGWSGEVLGSGQPQMRLEERGPVTFATIGLVRRDYDQYYRGF SNATLWPAFHYRPDLLQFDRHDFEGYCRVNTWLAQQLVPLLRDDDVIWVHDYHLIPFAQALRAAGVKNRIGFFLHIPFPA AQVLLAVPPHRALVEALCSFDLLGFQTKPDLRAFCDYIVNEADGWAEAQAPGRSAAPTVVHAFGRTLRAAAYPIGVYPDE IAELAKAGEGDKPVRTIEATLHARKLIMSVDRLDYSKGLVERFRAFERLLEHSPSYRDKVSFLQIAPPTRSDLHAYQEIR LQLEGESGRINGRFAELDWTPIRYIHRQYERPVLAALFRTAHVGYVTPLRDGMNLVAKEYVSAQDPEDPGVLVLSRFAGA AQELTGALIVNPVDIDGMADALGTALSMPLAERKARYVDMMAQLRENNVSVWRDNFMRDLQQMPDPLAQSIRETAQG
Specific function: Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=464, Percent_Identity=53.2327586206897, Blast_Score=481, Evalue=1e-137, Organism=Caenorhabditis elegans, GI115533560, Length=357, Percent_Identity=31.9327731092437, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI115533558, Length=357, Percent_Identity=31.9327731092437, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI71987012, Length=435, Percent_Identity=28.0459770114943, Blast_Score=143, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6319602, Length=475, Percent_Identity=32.2105263157895, Blast_Score=278, Evalue=1e-75, Organism=Saccharomyces cerevisiae, GI6320279, Length=420, Percent_Identity=26.6666666666667, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6323537, Length=397, Percent_Identity=27.455919395466, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6323917, Length=400, Percent_Identity=26.75, Blast_Score=158, Evalue=2e-39, Organism=Drosophila melanogaster, GI19920676, Length=491, Percent_Identity=34.826883910387, Blast_Score=274, Evalue=8e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 - InterPro: IPR012766 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: =2.4.1.15 [H]
Molecular weight: Translated: 53461; Mature: 53329
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLIIVSNRVAPISEGGPAAGGLAVGVYDALKETGGMWFGWSGEVLGSGQPQMRLEERG CCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEECCCC PVTFATIGLVRRDYDQYYRGFSNATLWPAFHYRPDLLQFDRHDFEGYCRVNTWLAQQLVP CEEEEHHHHHHHHHHHHHCCCCCCEECCEECCCCCHHHHCCCCCCCEEEHHHHHHHHHHH LLRDDDVIWVHDYHLIPFAQALRAAGVKNRIGFFLHIPFPAAQVLLAVPPHRALVEALCS HHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHEEECCCHHHHHHHHHH FDLLGFQTKPDLRAFCDYIVNEADGWAEAQAPGRSAAPTVVHAFGRTLRAAAYPIGVYPD HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH EIAELAKAGEGDKPVRTIEATLHARKLIMSVDRLDYSKGLVERFRAFERLLEHSPSYRDK HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VSFLQIAPPTRSDLHAYQEIRLQLEGESGRINGRFAELDWTPIRYIHRQYERPVLAALFR CCEEEECCCCHHHHHHHHHHEEEECCCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHHH TAHVGYVTPLRDGMNLVAKEYVSAQDPEDPGVLVLSRFAGAAQELTGALIVNPVDIDGMA HHHCCEECCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHCCHHHHCCCEEEECCCCCCHHH DALGTALSMPLAERKARYVDMMAQLRENNVSVWRDNFMRDLQQMPDPLAQSIRETAQG HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure SRLIIVSNRVAPISEGGPAAGGLAVGVYDALKETGGMWFGWSGEVLGSGQPQMRLEERG CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEECCCC PVTFATIGLVRRDYDQYYRGFSNATLWPAFHYRPDLLQFDRHDFEGYCRVNTWLAQQLVP CEEEEHHHHHHHHHHHHHCCCCCCEECCEECCCCCHHHHCCCCCCCEEEHHHHHHHHHHH LLRDDDVIWVHDYHLIPFAQALRAAGVKNRIGFFLHIPFPAAQVLLAVPPHRALVEALCS HHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHEEECCCHHHHHHHHHH FDLLGFQTKPDLRAFCDYIVNEADGWAEAQAPGRSAAPTVVHAFGRTLRAAAYPIGVYPD HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH EIAELAKAGEGDKPVRTIEATLHARKLIMSVDRLDYSKGLVERFRAFERLLEHSPSYRDK HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VSFLQIAPPTRSDLHAYQEIRLQLEGESGRINGRFAELDWTPIRYIHRQYERPVLAALFR CCEEEECCCCHHHHHHHHHHEEEECCCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHHH TAHVGYVTPLRDGMNLVAKEYVSAQDPEDPGVLVLSRFAGAAQELTGALIVNPVDIDGMA HHHCCEECCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHCCHHHHCCCEEEECCCCCCHHH DALGTALSMPLAERKARYVDMMAQLRENNVSVWRDNFMRDLQQMPDPLAQSIRETAQG HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA