| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475620
Identifier: 186475620
GI number: 186475620
Start: 954048
End: 954938
Strand: Reverse
Name: 186475620
Synonym: Bphy_0855
Alternate gene names: NA
Gene position: 954938-954048 (Counterclockwise)
Preceding gene: 186475621
Following gene: 186475618
Centisome position: 27.45
GC content: 62.51
Gene sequence:
>891_bases ATGAACGTGCTCTACTGGCTCGAACCTTGGGAGCCGTCGCCGACCGTCGTGATCGCGATGCTGATCGCCGCGGTGCTGTT TGCGCGCGGCGTGCGCAAGGCGAAGGCGTCAGTGGCTCGGCAACTGTCGTTCTGGTTCGGCCTTGCAGCGCTCTATGTCG CGCTGCATACACGGCTCGACTATTTCTTCGAGCATGAATTCTTCATGCATCGGGCGCAGCATCTGGTGCTGCATCATCTC GGACCGTTCTTCATTGCGCTCTCGTATCCGGGCGCGGCGATGCGCGCAGGCATTCCGTACCCTTGGCGGCATCGCTTCGT GCGTCCGGCATTGCGAATGCGCGGCGTGCGGACGATGCTCGACGTTCTGTTTCATCCCGTCATCGCCGTCGTGCTCTTCG TTGGACTGATCTATTTCTGGCTGCTTGCGCCGGTTCACTTCGTCGCGATGCTCGACTGGCGGCTGTATCGCGTGATGAAC TGGAGCATGGTGATCGACGGCCTGATGTTCTGGTGGCTGGTGCTCGATCCGAGGCCTGCACCGCCCGCACGGCTGTCGCC AGGGCGCCGTGTCGTGCTGGTCGTCGCCGCAATTCCCCCGCAGATCGTACTCGGCGCGTTCATTTTTTTCTCGCCGCGCG AGCTGTATCCCGTGTATTCGATCTGCGGACGCGCGTTCACCTGGCTCAGCCCGATGCGCGATCAGCAGATCGGCGGGCTG TTGCTCTGGATTCCGGGTTCGATGATGAGCGTGATAGGCGCAGTGCTTGCGCTGCGTCACTGGATGAGACTCTCCGCGCG TGCGCGCCTGCGCGAGGAGAAACAGGCGGACGTCACGGCGTCTGCTCGCACGCGAACCTCATCGAGCGCGGTCCATGCCA ATCAGCATTGA
Upstream 100 bases:
>100_bases ACACTCGATGCGCCGTTCGTCGTGAAGTCGCCGGCGGCGGCGAAGTAACGCCAGGCGAACTTGCGCTTCCTTCCGCGATG AAACTGATCCCTTGTTCGCG
Downstream 100 bases:
>100_bases GACCTGCGTGCGTCAGGCAGAACGCATCCAGATGTGCGGGATGCCGTCCTCTTCGTGCACGTCCGATACCGGCTCGAAGC CGAACGCGCCATAGAACGCC
Product: putative inner membrane protein
Products: NA
Alternate protein names: Copper Resistance Transporter; Cytochrome C Oxidase Caa3 Assembly Factor Family Protein; CtaG Protein
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MNVLYWLEPWEPSPTVVIAMLIAAVLFARGVRKAKASVARQLSFWFGLAALYVALHTRLDYFFEHEFFMHRAQHLVLHHL GPFFIALSYPGAAMRAGIPYPWRHRFVRPALRMRGVRTMLDVLFHPVIAVVLFVGLIYFWLLAPVHFVAMLDWRLYRVMN WSMVIDGLMFWWLVLDPRPAPPARLSPGRRVVLVVAAIPPQIVLGAFIFFSPRELYPVYSICGRAFTWLSPMRDQQIGGL LLWIPGSMMSVIGAVLALRHWMRLSARARLREEKQADVTASARTRTSSSAVHANQH
Sequences:
>Translated_296_residues MNVLYWLEPWEPSPTVVIAMLIAAVLFARGVRKAKASVARQLSFWFGLAALYVALHTRLDYFFEHEFFMHRAQHLVLHHL GPFFIALSYPGAAMRAGIPYPWRHRFVRPALRMRGVRTMLDVLFHPVIAVVLFVGLIYFWLLAPVHFVAMLDWRLYRVMN WSMVIDGLMFWWLVLDPRPAPPARLSPGRRVVLVVAAIPPQIVLGAFIFFSPRELYPVYSICGRAFTWLSPMRDQQIGGL LLWIPGSMMSVIGAVLALRHWMRLSARARLREEKQADVTASARTRTSSSAVHANQH >Mature_296_residues MNVLYWLEPWEPSPTVVIAMLIAAVLFARGVRKAKASVARQLSFWFGLAALYVALHTRLDYFFEHEFFMHRAQHLVLHHL GPFFIALSYPGAAMRAGIPYPWRHRFVRPALRMRGVRTMLDVLFHPVIAVVLFVGLIYFWLLAPVHFVAMLDWRLYRVMN WSMVIDGLMFWWLVLDPRPAPPARLSPGRRVVLVVAAIPPQIVLGAFIFFSPRELYPVYSICGRAFTWLSPMRDQQIGGL LLWIPGSMMSVIGAVLALRHWMRLSARARLREEKQADVTASARTRTSSSAVHANQH
Specific function: Unknown
COG id: COG3336
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33968; Mature: 33968
Theoretical pI: Translated: 11.67; Mature: 11.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLYWLEPWEPSPTVVIAMLIAAVLFARGVRKAKASVARQLSFWFGLAALYVALHTRLD CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFFEHEFFMHRAQHLVLHHLGPFFIALSYPGAAMRAGIPYPWRHRFVRPALRMRGVRTML HHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH DVLFHPVIAVVLFVGLIYFWLLAPVHFVAMLDWRLYRVMNWSMVIDGLMFWWLVLDPRPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PPARLSPGRRVVLVVAAIPPQIVLGAFIFFSPRELYPVYSICGRAFTWLSPMRDQQIGGL CCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCE LLWIPGSMMSVIGAVLALRHWMRLSARARLREEKQADVTASARTRTSSSAVHANQH EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNVLYWLEPWEPSPTVVIAMLIAAVLFARGVRKAKASVARQLSFWFGLAALYVALHTRLD CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFFEHEFFMHRAQHLVLHHLGPFFIALSYPGAAMRAGIPYPWRHRFVRPALRMRGVRTML HHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH DVLFHPVIAVVLFVGLIYFWLLAPVHFVAMLDWRLYRVMNWSMVIDGLMFWWLVLDPRPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PPARLSPGRRVVLVVAAIPPQIVLGAFIFFSPRELYPVYSICGRAFTWLSPMRDQQIGGL CCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCE LLWIPGSMMSVIGAVLALRHWMRLSARARLREEKQADVTASARTRTSSSAVHANQH EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA