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The map label for this gene is yjbJ [C]

Identifier: 186475613

GI number: 186475613

Start: 947234

End: 947440

Strand: Reverse

Name: yjbJ [C]

Synonym: Bphy_0848

Alternate gene names: 186475613

Gene position: 947440-947234 (Counterclockwise)

Preceding gene: 186475614

Following gene: 186475612

Centisome position: 27.23

GC content: 58.45

Gene sequence:

>207_bases
ATGAACAACGATATTGCTGAGGGCAAATGGAAACAGATGATCGGCAAGGCGAAAACCGCGTGGGGTGAACTCACGGACGA
CGAATTGACCAAGGCGGAAGGGCGGGCCGACAAGCTGGCGGGTCTGATCCAGGAGCGCTATGGCAAAACGCGCGACGAAG
CGGAACTCGAGGTGCGCCGCTTCTTCGACCGGAACCGGGACTTTTGA

Upstream 100 bases:

>100_bases
TGCTTTTACGGGATTGTCCGGATTGGCACGCGTCCTGCTTGTTCAGTATTTCAGGCCGATGAAGTTTTAGTTCATTCGGA
AAAAACACGGGAGGTGTGCC

Downstream 100 bases:

>100_bases
TCCCGGCAAGCCCGACCGGGAGGATTGGCCGCTCACCCCGATCATCAAGCGTCCGCGCGCACGGCGCCGCCCCGGCGGGC
CGCGCACGTCGGACACCCGT

Product: CsbD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MNNDIAEGKWKQMIGKAKTAWGELTDDELTKAEGRADKLAGLIQERYGKTRDEAELEVRRFFDRNRDF

Sequences:

>Translated_68_residues
MNNDIAEGKWKQMIGKAKTAWGELTDDELTKAEGRADKLAGLIQERYGKTRDEAELEVRRFFDRNRDF
>Mature_68_residues
MNNDIAEGKWKQMIGKAKTAWGELTDDELTKAEGRADKLAGLIQERYGKTRDEAELEVRRFFDRNRDF

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

Organism=Escherichia coli, GI1790479, Length=65, Percent_Identity=55.3846153846154, Blast_Score=69, Evalue=5e-14,

Paralogues:

None

Copy number: 12620 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 440 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 7934; Mature: 7934

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDIAEGKWKQMIGKAKTAWGELTDDELTKAEGRADKLAGLIQERYGKTRDEAELEVRR
CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHH
FFDRNRDF
HHHCCCCC
>Mature Secondary Structure
MNNDIAEGKWKQMIGKAKTAWGELTDDELTKAEGRADKLAGLIQERYGKTRDEAELEVRR
CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHH
FFDRNRDF
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]