| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is flbA [H]
Identifier: 186475487
GI number: 186475487
Start: 814002
End: 815849
Strand: Reverse
Name: flbA [H]
Synonym: Bphy_0722
Alternate gene names: 186475487
Gene position: 815849-814002 (Counterclockwise)
Preceding gene: 186475491
Following gene: 186475485
Centisome position: 23.45
GC content: 68.4
Gene sequence:
>1848_bases ATGCACCCAGTTTTCGACCGCGCGTATAGCGCGCATCGTGACGGCCGGCTCGACGACGCCGAGCGCGGCTATCGCGCCAC CCTCGATCTCGATCCCGCTCACGTCGACGCGCTGCATCTGCTCGGCGTGCTGCGCCATCAGCAAGGCCAGCACGAGGAAG CGGCCGACCTCGTGCGCCGCGCTGCCGACTTGCGCCCGCAAGATGCCGCGTTGCAGCTGAACCTCGGCAATGCGCTGAAG GCGCTCGGCCGTCTCGACCAGGCAATCGAACGCTTTCGCAATGCGCTGACGCTCGCGCCGACGTTTCCGATGGCGCACTA CAACCTGGGCAACGCGTACGCGCTCGCGGGGCGCCATGAAGACGCCGTCGATGCGTTCCAGAAGTCGCTGCGCCTGCAGC CGATGGACGCGTCGTCACACGTCAATCTCGGCAACGCGCTGCATGCGTTGGGCAGGCACCGTGAAGCGGCCGATTCGTTC CGGCGCGCGCTCGAACTGCGGCCCGGCCATGCGGGCGCGCACAACAACATGGGCATGGCGCTCAACGCGCTCGGTTCCGC GACGGAGGCAGGCGCCCATTTCCGCGCGGCGCTGAAGATTGAGCCGCGCTTCGTCGCCGCGCGTTTCAACCTCGCCAATA CACTCGACGCGACGGGTCAGCATGAACAGGCCGTCACGGAGTTCGAAGCGGTCCTTGCGATGCAGTCGAGCTTGCCGCCC GCTTTGTTCGGCCTCGGTAACGCGCTCGCGTCGCTTGGCCGTCATGCAGAAGCGCGGCCGCGTTTCGAACGCGCCGTTGG TCTTGATCCGGCCTTTGCGCTCGCGTGGCTGAGCCTCGGCGCCGCGCATCACGCGCTCGGCGCGCACGACGCTGCCGTGC GCGCTTTCGACCAGGCATTGCGTCTGCGTCCCGATCTGCCGATGGCGCATATGAATCGCGGCGTCGCGCTGCTCACGCTG GGCGACTTCAAGCGTGGACTGCCGGAATATGAATGGCGGCTGGAAAACGCGGCCGCGGCGCCGGACGCGACGGCGCTGCC GCGCTGGAACGGCGAGCCGATCGAAGGAAAGACGTTGTTCCTGCACGCCGAGCAGGGTTTCGGGGACACGCTGCAATTCG TGCGTTTCGTCGAACAGGTGGCGGGACGCGCCGTGCGGATCGTACTTGAAGTGCAGCCGCAGCTCTTGTCCTTGCTCGCG CCGACAGCGGAACAATGGCGCGTCACGCTGATACCGCAAGGCGCGCCGCGGCCGCGCGCCGATTTGCAGTGCCCGCTGCT GAGCCTGCCATTCGCACTCGGCACGGAACTCGACACGATTCCGGCACGCACGCCTTATCTGCAAGCACCCGCCGCGTCCC GCCGCACGTGGCGCGGCTCGCTCGGCGGGCACGCGAAGCGCAAGCTCGGCCTCGCGTGGTCAGGACGCGCGCAGCGTCAG GAGAATCGCTCGCTGCCGCTCGCTGCGCTCGAGCCGCTGTTCGCGCTCGCCGGCATCGACTGGATCGTGCTGCAGCCCTC GCTCACCGACGAAGAACGCGCCGCGCTCGATCGGCATCCGCGCGCGAAGAACATCCATCGCTTCGACGGGCGCATTCGCG ACTTCGCCGACACGGCGGCCATTATCGAGCGGCTGGATGGCGTGGTGTCGGTCGATACGGCGATTGCGCACCTGACGGGC GCGCTCGGCAAGCCGCTTTGGCTGATGCTGCCGTTCGCGGCCGACTGGCGCTGGTTCACGGACAATCGAAGCAGCCCGTG GTATCCGTCCGCGCGCCTCGTGCGGCAGCCCCGGCCGGGCGCATGGCAGGAAGTCGTCGAAGACGTGGCGGCGGCGCTGC GCGCGTGA
Upstream 100 bases:
>100_bases GTTCACATGTTATTGCACAACACGCCCGACGTCAATCACGGGAAGGATTCGCCGAGTATGGGAAAATGCGGGTTTTCCTG TATCACACCTCGCCTGCGTC
Downstream 100 bases:
>100_bases GACGGGCGCGTACTGCATCGCCGAAACGGCCGATGAAATGAAAACCCCCGCACACGTGCGGGGGTCTGGTTCTACAGCGT CGGGGCACGCGCCCCATAAC
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MHPVFDRAYSAHRDGRLDDAERGYRATLDLDPAHVDALHLLGVLRHQQGQHEEAADLVRRAADLRPQDAALQLNLGNALK ALGRLDQAIERFRNALTLAPTFPMAHYNLGNAYALAGRHEDAVDAFQKSLRLQPMDASSHVNLGNALHALGRHREAADSF RRALELRPGHAGAHNNMGMALNALGSATEAGAHFRAALKIEPRFVAARFNLANTLDATGQHEQAVTEFEAVLAMQSSLPP ALFGLGNALASLGRHAEARPRFERAVGLDPAFALAWLSLGAAHHALGAHDAAVRAFDQALRLRPDLPMAHMNRGVALLTL GDFKRGLPEYEWRLENAAAAPDATALPRWNGEPIEGKTLFLHAEQGFGDTLQFVRFVEQVAGRAVRIVLEVQPQLLSLLA PTAEQWRVTLIPQGAPRPRADLQCPLLSLPFALGTELDTIPARTPYLQAPAASRRTWRGSLGGHAKRKLGLAWSGRAQRQ ENRSLPLAALEPLFALAGIDWIVLQPSLTDEERAALDRHPRAKNIHRFDGRIRDFADTAAIIERLDGVVSVDTAIAHLTG ALGKPLWLMLPFAADWRWFTDNRSSPWYPSARLVRQPRPGAWQEVVEDVAAALRA
Sequences:
>Translated_615_residues MHPVFDRAYSAHRDGRLDDAERGYRATLDLDPAHVDALHLLGVLRHQQGQHEEAADLVRRAADLRPQDAALQLNLGNALK ALGRLDQAIERFRNALTLAPTFPMAHYNLGNAYALAGRHEDAVDAFQKSLRLQPMDASSHVNLGNALHALGRHREAADSF RRALELRPGHAGAHNNMGMALNALGSATEAGAHFRAALKIEPRFVAARFNLANTLDATGQHEQAVTEFEAVLAMQSSLPP ALFGLGNALASLGRHAEARPRFERAVGLDPAFALAWLSLGAAHHALGAHDAAVRAFDQALRLRPDLPMAHMNRGVALLTL GDFKRGLPEYEWRLENAAAAPDATALPRWNGEPIEGKTLFLHAEQGFGDTLQFVRFVEQVAGRAVRIVLEVQPQLLSLLA PTAEQWRVTLIPQGAPRPRADLQCPLLSLPFALGTELDTIPARTPYLQAPAASRRTWRGSLGGHAKRKLGLAWSGRAQRQ ENRSLPLAALEPLFALAGIDWIVLQPSLTDEERAALDRHPRAKNIHRFDGRIRDFADTAAIIERLDGVVSVDTAIAHLTG ALGKPLWLMLPFAADWRWFTDNRSSPWYPSARLVRQPRPGAWQEVVEDVAAALRA >Mature_615_residues MHPVFDRAYSAHRDGRLDDAERGYRATLDLDPAHVDALHLLGVLRHQQGQHEEAADLVRRAADLRPQDAALQLNLGNALK ALGRLDQAIERFRNALTLAPTFPMAHYNLGNAYALAGRHEDAVDAFQKSLRLQPMDASSHVNLGNALHALGRHREAADSF RRALELRPGHAGAHNNMGMALNALGSATEAGAHFRAALKIEPRFVAARFNLANTLDATGQHEQAVTEFEAVLAMQSSLPP ALFGLGNALASLGRHAEARPRFERAVGLDPAFALAWLSLGAAHHALGAHDAAVRAFDQALRLRPDLPMAHMNRGVALLTL GDFKRGLPEYEWRLENAAAAPDATALPRWNGEPIEGKTLFLHAEQGFGDTLQFVRFVEQVAGRAVRIVLEVQPQLLSLLA PTAEQWRVTLIPQGAPRPRADLQCPLLSLPFALGTELDTIPARTPYLQAPAASRRTWRGSLGGHAKRKLGLAWSGRAQRQ ENRSLPLAALEPLFALAGIDWIVLQPSLTDEERAALDRHPRAKNIHRFDGRIRDFADTAAIIERLDGVVSVDTAIAHLTG ALGKPLWLMLPFAADWRWFTDNRSSPWYPSARLVRQPRPGAWQEVVEDVAAALRA
Specific function: May Be Involved In Cell Division. Overexpression Of Nlpi Results In The Loss Of The Rod Morphology And The Formation Of Single Prolate Ellipsoids And Pairs Of Prolate Ellipsoids Joined By Partial Constrictions. [C]
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307150, Length=321, Percent_Identity=30.5295950155763, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI32307148, Length=321, Percent_Identity=30.5295950155763, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI301336134, Length=298, Percent_Identity=28.8590604026846, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI83415184, Length=298, Percent_Identity=28.8590604026846, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI118766330, Length=273, Percent_Identity=27.1062271062271, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI118766328, Length=273, Percent_Identity=27.1062271062271, Blast_Score=88, Evalue=3e-17, Organism=Homo sapiens, GI22749211, Length=344, Percent_Identity=26.453488372093, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI196259772, Length=254, Percent_Identity=27.1653543307087, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI196259776, Length=254, Percent_Identity=27.1653543307087, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI196259774, Length=254, Percent_Identity=27.1653543307087, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI196259770, Length=254, Percent_Identity=27.1653543307087, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI21361204, Length=254, Percent_Identity=27.1653543307087, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI310131789, Length=268, Percent_Identity=22.7611940298507, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI310123097, Length=268, Percent_Identity=22.7611940298507, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI310110582, Length=268, Percent_Identity=22.7611940298507, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI224809432, Length=218, Percent_Identity=24.3119266055046, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI167466175, Length=195, Percent_Identity=24.1025641025641, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI167466177, Length=195, Percent_Identity=24.1025641025641, Blast_Score=67, Evalue=6e-11, Organism=Caenorhabditis elegans, GI115532692, Length=298, Percent_Identity=31.5436241610738, Blast_Score=152, Evalue=7e-37, Organism=Caenorhabditis elegans, GI115532690, Length=298, Percent_Identity=31.5436241610738, Blast_Score=151, Evalue=9e-37, Organism=Caenorhabditis elegans, GI25147174, Length=223, Percent_Identity=29.1479820627803, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI193210476, Length=190, Percent_Identity=27.8947368421053, Blast_Score=68, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319387, Length=173, Percent_Identity=28.9017341040462, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI17647755, Length=321, Percent_Identity=30.5295950155763, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI24585827, Length=321, Percent_Identity=30.5295950155763, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI24585829, Length=321, Percent_Identity=30.5295950155763, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI281364285, Length=321, Percent_Identity=30.2180685358255, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI24581187, Length=321, Percent_Identity=30.2180685358255, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI161076610, Length=307, Percent_Identity=27.3615635179153, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI19920486, Length=307, Percent_Identity=27.3615635179153, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24647123, Length=247, Percent_Identity=25.9109311740891, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24656717, Length=216, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI18110006, Length=216, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI24660950, Length=318, Percent_Identity=28.3018867924528, Blast_Score=67, Evalue=5e-11, Organism=Drosophila melanogaster, GI24659892, Length=265, Percent_Identity=22.2641509433962, Blast_Score=66, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67420; Mature: 67420
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPVFDRAYSAHRDGRLDDAERGYRATLDLDPAHVDALHLLGVLRHQQGQHEEAADLVRR CCCHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AADLRPQDAALQLNLGNALKALGRLDQAIERFRNALTLAPTFPMAHYNLGNAYALAGRHE HHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCH DAVDAFQKSLRLQPMDASSHVNLGNALHALGRHREAADSFRRALELRPGHAGAHNNMGMA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH LNALGSATEAGAHFRAALKIEPRFVAARFNLANTLDATGQHEQAVTEFEAVLAMQSSLPP HHHHCCCHHCCCCEEEEEEECCEEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHCCCH ALFGLGNALASLGRHAEARPRFERAVGLDPAFALAWLSLGAAHHALGAHDAAVRAFDQAL HHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RLRPDLPMAHMNRGVALLTLGDFKRGLPEYEWRLENAAAAPDATALPRWNGEPIEGKTLF HCCCCCCHHHHCCCEEEEEECHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE LHAEQGFGDTLQFVRFVEQVAGRAVRIVLEVQPQLLSLLAPTAEQWRVTLIPQGAPRPRA EEECCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCHHCEEEEECCCCCCCCC DLQCPLLSLPFALGTELDTIPARTPYLQAPAASRRTWRGSLGGHAKRKLGLAWSGRAQRQ CCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEECCCCHHH ENRSLPLAALEPLFALAGIDWIVLQPSLTDEERAALDRHPRAKNIHRFDGRIRDFADTAA HCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCCCCHHHHCCHHHHHHHHHH IIERLDGVVSVDTAIAHLTGALGKPLWLMLPFAADWRWFTDNRSSPWYPSARLVRQPRPG HHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHCCCCCC AWQEVVEDVAAALRA HHHHHHHHHHHHHCC >Mature Secondary Structure MHPVFDRAYSAHRDGRLDDAERGYRATLDLDPAHVDALHLLGVLRHQQGQHEEAADLVRR CCCHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AADLRPQDAALQLNLGNALKALGRLDQAIERFRNALTLAPTFPMAHYNLGNAYALAGRHE HHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCH DAVDAFQKSLRLQPMDASSHVNLGNALHALGRHREAADSFRRALELRPGHAGAHNNMGMA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH LNALGSATEAGAHFRAALKIEPRFVAARFNLANTLDATGQHEQAVTEFEAVLAMQSSLPP HHHHCCCHHCCCCEEEEEEECCEEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHCCCH ALFGLGNALASLGRHAEARPRFERAVGLDPAFALAWLSLGAAHHALGAHDAAVRAFDQAL HHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RLRPDLPMAHMNRGVALLTLGDFKRGLPEYEWRLENAAAAPDATALPRWNGEPIEGKTLF HCCCCCCHHHHCCCEEEEEECHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE LHAEQGFGDTLQFVRFVEQVAGRAVRIVLEVQPQLLSLLAPTAEQWRVTLIPQGAPRPRA EEECCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCHHCEEEEECCCCCCCCC DLQCPLLSLPFALGTELDTIPARTPYLQAPAASRRTWRGSLGGHAKRKLGLAWSGRAQRQ CCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEECCCCHHH ENRSLPLAALEPLFALAGIDWIVLQPSLTDEERAALDRHPRAKNIHRFDGRIRDFADTAA HCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCCCCHHHHCCHHHHHHHHHH IIERLDGVVSVDTAIAHLTGALGKPLWLMLPFAADWRWFTDNRSSPWYPSARLVRQPRPG HHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHCCCCCC AWQEVVEDVAAALRA HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]