| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475483
Identifier: 186475483
GI number: 186475483
Start: 809508
End: 810251
Strand: Direct
Name: 186475483
Synonym: Bphy_0718
Alternate gene names: NA
Gene position: 809508-810251 (Clockwise)
Preceding gene: 186475482
Following gene: 186475486
Centisome position: 23.27
GC content: 64.11
Gene sequence:
>744_bases ATGAAGTACCCCCTGGATTTGCGCCGTGCCGTCATGCTCGCGTTTGCCTGCGCGCTCATGCATGGCGGCATCGCGGAGTC GGCCGGCAACACAGCAACGGGAACGGGCGTCGTGCGTGCGGGCGCGGCGAAAGGCGCGCAGGGCGACGCGCCGGATGCAT CGACGGAACCGGGTCTTGCCGATACGGCGGACGATTCCCCCGGCCTCGTCGCACATGCGGACTCGAGCGGCAGCGGGCAA GGCGATGTCGCCGATCTGATGCAACTGATTCACGACGGCGGGCTCGTCGAGATGCGCACCACGTACAACGGCGGTTATGG CGCGTCGCTGTTTTTTCACGCGCCGAGTATGACCTACTATGTCGCGCTGTTTCAGGACAAGCATTTCTGGCGCGTGATCA GAACGTCCGACCAGACGCGCGCCGAAGCGATCTATGCAGGCTTCGCGCGGCAAACGGCGCAGCTTGCGGAAGTCGAAATT CGGCGGGCACAGTTGCAGGCACAGAAGGCGTCGATCGAGCGCGTGATCAATGAATCACAGGCGCGCGCACAACGGTTGCA GGCGGATATCGAAGTGGCGCGCACTCAGGAAGCGAAGGTCGCCGACCACCAGCGGCAGACGCAGGACGAGGCGCTCGCGT TGCGCGACGAAAAGGAGAAGGCCCAGGCGCAACTGCGCCAGTTGCAGCAGCAGGTTCTGATACTGCAACATCAGGCGGAG GCAGGTTTGCCGGCAAACCGGTGA
Upstream 100 bases:
>100_bases CCGTTTATCTTGATTTAAAGTCCTGTTTTCAAGCGTCAAAGAGGGCAAAATCCGCGCGATAATCCGAGGCTGTTTCTCGA TTCGCATGGAGTATCGACGT
Downstream 100 bases:
>100_bases GGGTATAGCTGGCGCCGGGATCCACTGCGACGGCGCAAAGAATAGGGCTGAGTCCGCGATTCGTGGACTCAGCCCTTTGT GCCTTCAGGCAGGCGCACTG
Product: putative exported lipoprotein
Products: NA
Alternate protein names: Lipoprotein; Exported Lipoprotein; Molecular Chaperone; Exported Protein
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKYPLDLRRAVMLAFACALMHGGIAESAGNTATGTGVVRAGAAKGAQGDAPDASTEPGLADTADDSPGLVAHADSSGSGQ GDVADLMQLIHDGGLVEMRTTYNGGYGASLFFHAPSMTYYVALFQDKHFWRVIRTSDQTRAEAIYAGFARQTAQLAEVEI RRAQLQAQKASIERVINESQARAQRLQADIEVARTQEAKVADHQRQTQDEALALRDEKEKAQAQLRQLQQQVLILQHQAE AGLPANR
Sequences:
>Translated_247_residues MKYPLDLRRAVMLAFACALMHGGIAESAGNTATGTGVVRAGAAKGAQGDAPDASTEPGLADTADDSPGLVAHADSSGSGQ GDVADLMQLIHDGGLVEMRTTYNGGYGASLFFHAPSMTYYVALFQDKHFWRVIRTSDQTRAEAIYAGFARQTAQLAEVEI RRAQLQAQKASIERVINESQARAQRLQADIEVARTQEAKVADHQRQTQDEALALRDEKEKAQAQLRQLQQQVLILQHQAE AGLPANR >Mature_247_residues MKYPLDLRRAVMLAFACALMHGGIAESAGNTATGTGVVRAGAAKGAQGDAPDASTEPGLADTADDSPGLVAHADSSGSGQ GDVADLMQLIHDGGLVEMRTTYNGGYGASLFFHAPSMTYYVALFQDKHFWRVIRTSDQTRAEAIYAGFARQTAQLAEVEI RRAQLQAQKASIERVINESQARAQRLQADIEVARTQEAKVADHQRQTQDEALALRDEKEKAQAQLRQLQQQVLILQHQAE AGLPANR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26670; Mature: 26670
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYPLDLRRAVMLAFACALMHGGIAESAGNTATGTGVVRAGAAKGAQGDAPDASTEPGLA CCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC DTADDSPGLVAHADSSGSGQGDVADLMQLIHDGGLVEMRTTYNGGYGASLFFHAPSMTYY CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCCEEE VALFQDKHFWRVIRTSDQTRAEAIYAGFARQTAQLAEVEIRRAQLQAQKASIERVINESQ EEEECCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAQRLQADIEVARTQEAKVADHQRQTQDEALALRDEKEKAQAQLRQLQQQVLILQHQAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLPANR CCCCCCC >Mature Secondary Structure MKYPLDLRRAVMLAFACALMHGGIAESAGNTATGTGVVRAGAAKGAQGDAPDASTEPGLA CCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC DTADDSPGLVAHADSSGSGQGDVADLMQLIHDGGLVEMRTTYNGGYGASLFFHAPSMTYY CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCCEEE VALFQDKHFWRVIRTSDQTRAEAIYAGFARQTAQLAEVEIRRAQLQAQKASIERVINESQ EEEECCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAQRLQADIEVARTQEAKVADHQRQTQDEALALRDEKEKAQAQLRQLQQQVLILQHQAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLPANR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA