| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475473
Identifier: 186475473
GI number: 186475473
Start: 794248
End: 795498
Strand: Direct
Name: 186475473
Synonym: Bphy_0708
Alternate gene names: NA
Gene position: 794248-795498 (Clockwise)
Preceding gene: 186475471
Following gene: 186475481
Centisome position: 22.83
GC content: 64.11
Gene sequence:
>1251_bases ATGAATATGGATTCGTCGATGAACACTGCGGTGGATGTGGCCATCATCGGAGCTGGGCCGTCGGGCGCTGTCGCTGCGGC GCTGCTGCGCAAGGCGGGACGGTCGGTGCTGGTGCTCGAGCGCCAGCACTTTCCGCGCTTTTCGATCGGTGAGAGCCTGT TGCCGCAGAGCATGGCGTACCTCGAAGAGGCGGGCATGCTGCAGGCCGTCGTCGAAGCGGGCTTTCAGTACAAGAATGGC GCGTATTTCGTGTATCGCGACCAGACATCCGCCTACGACTTCCGCGACAAGCATTCGACGGGTTGGGGCACGACGTATCA GGTTGAGCGTGCCGTCTTCGACGATCTGCTGATTCGCTGCGCGGCGGAGCAGGGCGCCGACGTGCGCTTCGGCCACACGG TGCTCGCGATGAAGACGGGAGAGGCGGGTGATGCGCCCGCGCTCGAGGTCGCCGGCGAAGCGGGCAACCCTTACCGGGTG CATGCGCGTTTCGTGCTTGACGCAAGCGGCTTTGGGCGCGTGCTGCCGCGTCTGCTGAGTCTCGAAGCGCCGACGCGCAT GCCGACCCGCGCCGCGATCTTCACGCACGTGCGCGACGGCATTCCTGTCGAAGCACACGATCGCAACAAGATCACGGTGG CCGTGCATCCCGAGCGTCGCGACGTGTGGTACTGGATGATTCCGCTCGCGAACGGGCGCTCGTCGGTGGGTTGCGTGGCG GAAGCTGCGTTTCTCGATGTACCGGAGGCGCAGCGGGAAGCGAAGCTGCGTGCGCTGCTCCGGAGCGAGCCGACGCTGAA TCGCCTGATCGGCAATGCGCCGTTCCTGATGCCCGTGCGGCATATCGGCGGCTATTCGGCGAATGTCGAGCGGCTGCATG GGCCGGGATATGCATTGCTCGGCAACGCGGGCGAGTTTCTGGATCCCGTGTTTTCGTCGGGTGTGACGATTGCGCTGCGG TCCGCGCATCTGGCTGTGCAGACGCTGGAGCGTCAGTTGAACGGTGAAGCCGTCGACTGGCAGTCGGCGTATGACATTCC GCTGCGCAAGGGGATCGACACGTTCCGCGCGTTCGTCGAGCGGTGGTACACGGGTGAGTTGCAGGACATCATTTTCTATC CGCAGCAGACGCCGATGATCCGGCGCATGATCAGCGCCGTGCTCGCGGGGTATGCGTGGGATGAGACGAATCCTTATGTC GCCGATCCTGAGCGGCGGTTGAATTCGCTGAGCGAGGTGTGTAAGGGGTAG
Upstream 100 bases:
>100_bases GGTGTTGGCTGGTCTTTGATTGGAATGATTGTGCGACATTGTAATCGCTGGTAAGGACGCAAAGCGTTGCGCGTGCAATA CGCTATTTGAAGGAAAATTA
Downstream 100 bases:
>100_bases GGGTGGGGGTGTTTTTGTCTGCGACGCAATCGCCGTTTTTGTCTTTTCGCCGGCATCCGGGTTGCGTTTCGCTGCCAGAA AAAAAACAACGCGCAGCGAC
Product: FAD-binding monooxygenase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Halogenase; Oxidoreductase Protein; Oxidoreductase; Dehydrogenase; Geranylgeranyl Reductase; FADH2 Dependent Halogenase; Electron Transfer Oxidoreductase; Alkylhalidase PltM; Pyridine Nucleotide-Disulfide Oxidoreductase; Alkylhalidase PltA; Dehyrogenase; Oxidoreductase Transmembrane Protein; LOW QUALITY PROTEIN Dehydrogenase; Monooxygenase; Dehydrogenases; Flavoprotein/Dehydrogenase; Dehydrogenase/Oxidoreductase; FAD Oxidoreductase; Hydroxylase; Alkylhalidase CmlS; Glucose-Inhibited Division Protein A; Geranylgeranyl Reductase Family Protein; Alkylhalidase; LOW QUALITY PROTEIN Oxidoreductase
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MNMDSSMNTAVDVAIIGAGPSGAVAAALLRKAGRSVLVLERQHFPRFSIGESLLPQSMAYLEEAGMLQAVVEAGFQYKNG AYFVYRDQTSAYDFRDKHSTGWGTTYQVERAVFDDLLIRCAAEQGADVRFGHTVLAMKTGEAGDAPALEVAGEAGNPYRV HARFVLDASGFGRVLPRLLSLEAPTRMPTRAAIFTHVRDGIPVEAHDRNKITVAVHPERRDVWYWMIPLANGRSSVGCVA EAAFLDVPEAQREAKLRALLRSEPTLNRLIGNAPFLMPVRHIGGYSANVERLHGPGYALLGNAGEFLDPVFSSGVTIALR SAHLAVQTLERQLNGEAVDWQSAYDIPLRKGIDTFRAFVERWYTGELQDIIFYPQQTPMIRRMISAVLAGYAWDETNPYV ADPERRLNSLSEVCKG
Sequences:
>Translated_416_residues MNMDSSMNTAVDVAIIGAGPSGAVAAALLRKAGRSVLVLERQHFPRFSIGESLLPQSMAYLEEAGMLQAVVEAGFQYKNG AYFVYRDQTSAYDFRDKHSTGWGTTYQVERAVFDDLLIRCAAEQGADVRFGHTVLAMKTGEAGDAPALEVAGEAGNPYRV HARFVLDASGFGRVLPRLLSLEAPTRMPTRAAIFTHVRDGIPVEAHDRNKITVAVHPERRDVWYWMIPLANGRSSVGCVA EAAFLDVPEAQREAKLRALLRSEPTLNRLIGNAPFLMPVRHIGGYSANVERLHGPGYALLGNAGEFLDPVFSSGVTIALR SAHLAVQTLERQLNGEAVDWQSAYDIPLRKGIDTFRAFVERWYTGELQDIIFYPQQTPMIRRMISAVLAGYAWDETNPYV ADPERRLNSLSEVCKG >Mature_416_residues MNMDSSMNTAVDVAIIGAGPSGAVAAALLRKAGRSVLVLERQHFPRFSIGESLLPQSMAYLEEAGMLQAVVEAGFQYKNG AYFVYRDQTSAYDFRDKHSTGWGTTYQVERAVFDDLLIRCAAEQGADVRFGHTVLAMKTGEAGDAPALEVAGEAGNPYRV HARFVLDASGFGRVLPRLLSLEAPTRMPTRAAIFTHVRDGIPVEAHDRNKITVAVHPERRDVWYWMIPLANGRSSVGCVA EAAFLDVPEAQREAKLRALLRSEPTLNRLIGNAPFLMPVRHIGGYSANVERLHGPGYALLGNAGEFLDPVFSSGVTIALR SAHLAVQTLERQLNGEAVDWQSAYDIPLRKGIDTFRAFVERWYTGELQDIIFYPQQTPMIRRMISAVLAGYAWDETNPYV ADPERRLNSLSEVCKG
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45855; Mature: 45855
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMDSSMNTAVDVAIIGAGPSGAVAAALLRKAGRSVLVLERQHFPRFSIGESLLPQSMAY CCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHH LEEAGMLQAVVEAGFQYKNGAYFVYRDQTSAYDFRDKHSTGWGTTYQVERAVFDDLLIRC HHHHHHHHHHHHCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHH AAEQGADVRFGHTVLAMKTGEAGDAPALEVAGEAGNPYRVHARFVLDASGFGRVLPRLLS HHCCCCCEEECCEEEEEECCCCCCCCCEEEECCCCCCEEEEEEEEEECCCHHHHHHHHHC LEAPTRMPTRAAIFTHVRDGIPVEAHDRNKITVAVHPERRDVWYWMIPLANGRSSVGCVA CCCCCCCCHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCCEEEEEEEECCCCCCCCHHH EAAFLDVPEAQREAKLRALLRSEPTLNRLIGNAPFLMPVRHIGGYSANVERLHGPGYALL HHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEHHHHCCCCCCCCEECCCCEEEE GNAGEFLDPVFSSGVTIALRSAHLAVQTLERQLNGEAVDWQSAYDIPLRKGIDTFRAFVE CCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHCHHHHHHHHH RWYTGELQDIIFYPQQTPMIRRMISAVLAGYAWDETNPYVADPERRLNSLSEVCKG HHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MNMDSSMNTAVDVAIIGAGPSGAVAAALLRKAGRSVLVLERQHFPRFSIGESLLPQSMAY CCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHH LEEAGMLQAVVEAGFQYKNGAYFVYRDQTSAYDFRDKHSTGWGTTYQVERAVFDDLLIRC HHHHHHHHHHHHCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHH AAEQGADVRFGHTVLAMKTGEAGDAPALEVAGEAGNPYRVHARFVLDASGFGRVLPRLLS HHCCCCCEEECCEEEEEECCCCCCCCCEEEECCCCCCEEEEEEEEEECCCHHHHHHHHHC LEAPTRMPTRAAIFTHVRDGIPVEAHDRNKITVAVHPERRDVWYWMIPLANGRSSVGCVA CCCCCCCCHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCCEEEEEEEECCCCCCCCHHH EAAFLDVPEAQREAKLRALLRSEPTLNRLIGNAPFLMPVRHIGGYSANVERLHGPGYALL HHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEHHHHCCCCCCCCEECCCCEEEE GNAGEFLDPVFSSGVTIALRSAHLAVQTLERQLNGEAVDWQSAYDIPLRKGIDTFRAFVE CCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHCHHHHHHHHH RWYTGELQDIIFYPQQTPMIRRMISAVLAGYAWDETNPYVADPERRLNSLSEVCKG HHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA