| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475463
Identifier: 186475463
GI number: 186475463
Start: 784441
End: 785109
Strand: Direct
Name: 186475463
Synonym: Bphy_0698
Alternate gene names: NA
Gene position: 784441-785109 (Clockwise)
Preceding gene: 186475462
Following gene: 186475464
Centisome position: 22.55
GC content: 65.02
Gene sequence:
>669_bases ATGGGTACGTTGACTCTTCGCGCGGCGCTGACTGTAGCGTTGCTCGTTGCCTCAAGCATGAGACCGTTCGGCCTGGCGCA AGCAGCCGCGCCCGCGCAGCCGCAAAACGGCAATGCGGCGCTCGTGTCGCAAGTTGCCGCGCGGCTCGCGCAAACCCGAG GCGTGCGCGCACAGTTCACGCAGACGCAGACGCTTTCGGCAATGAAGCAGCCGCTCGTCAGCACGGGCACGCTGGTGTTC TTCCGTGAGCGCGGCGTGATCTGGCGCGTGGATACGCCATACAAAGCCACCTACGTGATCGGCGATGCCGCCGTGAGCGA AGTCGACGCGGACGGCAAGCGCATCAATGCGAAGCGTACGCAGGGCGTGCGCGGCGTCGCGCAGGTTTCGAAGATGATGC GTGCGATGCTCGGCGGCGATCTGTCCGCGCTGTTCTCGCAATTCGACGTCGATGCGCAGGGCACGCCGTCGCAATGGAAG CTCGAACTGAAGCCGAACCAGCCGCAGATCGCGCAGTCGATCAAAGGCCTGCAGATGACGGGCGGCGAATTCCTGCAGAC GCTGCGCATTGCGCTCGCGAACGGCGACGTCACGCAGATCGACTTCGCGAACAGCGAGGCGATCACCGATCTGGCGCCCG GCGAGCGCACGCTGCTAGGAGCACAATGA
Upstream 100 bases:
>100_bases GGCTGACAAAGGGCTATACGATCCAGGTCGCGATCGAGGCCGCCACGCAGGAAACGCAGTTCGTGTCGCCGCCCGTCGTG TTTGACAAGCTGGAGCGCGC
Downstream 100 bases:
>100_bases TGCTGATGGCGCGACAGTGGACGAAGACGCAGTTGTGGAGCATTCGGGCCACATGGCTCGTGCTCGCGCTTGTCGCGTCG CTGTATTGCGCCTGGCGCTT
Product: putative signal peptide protein
Products: NA
Alternate protein names: Signal Peptide Protein; Exported Lipoprotein; Secreted Protein
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MGTLTLRAALTVALLVASSMRPFGLAQAAAPAQPQNGNAALVSQVAARLAQTRGVRAQFTQTQTLSAMKQPLVSTGTLVF FRERGVIWRVDTPYKATYVIGDAAVSEVDADGKRINAKRTQGVRGVAQVSKMMRAMLGGDLSALFSQFDVDAQGTPSQWK LELKPNQPQIAQSIKGLQMTGGEFLQTLRIALANGDVTQIDFANSEAITDLAPGERTLLGAQ
Sequences:
>Translated_222_residues MGTLTLRAALTVALLVASSMRPFGLAQAAAPAQPQNGNAALVSQVAARLAQTRGVRAQFTQTQTLSAMKQPLVSTGTLVF FRERGVIWRVDTPYKATYVIGDAAVSEVDADGKRINAKRTQGVRGVAQVSKMMRAMLGGDLSALFSQFDVDAQGTPSQWK LELKPNQPQIAQSIKGLQMTGGEFLQTLRIALANGDVTQIDFANSEAITDLAPGERTLLGAQ >Mature_221_residues GTLTLRAALTVALLVASSMRPFGLAQAAAPAQPQNGNAALVSQVAARLAQTRGVRAQFTQTQTLSAMKQPLVSTGTLVFF RERGVIWRVDTPYKATYVIGDAAVSEVDADGKRINAKRTQGVRGVAQVSKMMRAMLGGDLSALFSQFDVDAQGTPSQWKL ELKPNQPQIAQSIKGLQMTGGEFLQTLRIALANGDVTQIDFANSEAITDLAPGERTLLGAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23616; Mature: 23485
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTLTLRAALTVALLVASSMRPFGLAQAAAPAQPQNGNAALVSQVAARLAQTRGVRAQFT CCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH QTQTLSAMKQPLVSTGTLVFFRERGVIWRVDTPYKATYVIGDAAVSEVDADGKRINAKRT HHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCEEEEEECCHHHHHCCCCCCEECHHHH QGVRGVAQVSKMMRAMLGGDLSALFSQFDVDAQGTPSQWKLELKPNQPQIAQSIKGLQMT HCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCC GGEFLQTLRIALANGDVTQIDFANSEAITDLAPGERTLLGAQ CHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCCCCCEECCCC >Mature Secondary Structure GTLTLRAALTVALLVASSMRPFGLAQAAAPAQPQNGNAALVSQVAARLAQTRGVRAQFT CCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH QTQTLSAMKQPLVSTGTLVFFRERGVIWRVDTPYKATYVIGDAAVSEVDADGKRINAKRT HHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCEEEEEECCHHHHHCCCCCCEECHHHH QGVRGVAQVSKMMRAMLGGDLSALFSQFDVDAQGTPSQWKLELKPNQPQIAQSIKGLQMT HCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCC GGEFLQTLRIALANGDVTQIDFANSEAITDLAPGERTLLGAQ CHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA