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The map label for this gene is rfaC [H]

Identifier: 186475427

GI number: 186475427

Start: 746046

End: 747056

Strand: Direct

Name: rfaC [H]

Synonym: Bphy_0661

Alternate gene names: 186475427

Gene position: 746046-747056 (Clockwise)

Preceding gene: 186475425

Following gene: 186475434

Centisome position: 21.44

GC content: 65.68

Gene sequence:

>1011_bases
ATGAAGCGAATCCTTATCGTCAAGGTCACCTCGATGGGCGACGTGATCCAGGCGCAGCCGATCGTCTCCGATCTCAAGCG
GGCTTTTCCCGGCGTCGAGGTCGACTGGGCTGTTGACGAGTCGTTCGCCGAGATCGCGCGCTGGAATCCGGGCATCGACC
GCGTGCTATGCGCACCCCTGCGCCGCTTCAAGAAGGCACGGCGCTGGGCGGACTTCAGGGCCATCGCGCAGTCCATCGCC
GAGCTGCGCGCGCACCGCTATGACGTCGCCGTCGATATCCACGGCGTCTACAAGAGCGCGATCATCGCGTTCCTGTCGCG
TTCGCGCCGCCGCCTCGGCTATCGCAACAAGGATCTCGGCGAGCGCGGTGCTGCTTTCGCCTACACCGGCCGGTTCGTGC
CGCCGCGCGACCGCAATGCCTGGAGCGGCATGCGCGAAACCGTCGGCACGGCGCTCGGCTACTCGGTCGATACTCCGCCC
GACTACAACCTGCACATTCCCGCACCCGCCAAACCGATCGTCGAAACGGGAGGCCGGCCGCTCGCCATGCTGTTCCACGC
TGCGTCGAAGGACGACAAGAAGTGGCCGGCGGACCATTGGATCGCCATTGCGCGGGAACTCGTGCGGCGCGGCTTTCATG
TAGTGGTGCCGTGGGGTTCGCCTGCCGAGCGCAGCGAGGGGCTTGCCATCGTCGACAACGTGGAGGGCGCCGAACTCCTG
CCGCAACTGAGCGTGACAGGCATCGCGCAGGTGATCGCGGCGTCGGACTTCGTGATTGGCGTCGATACAGGGTTCGTCCA
TCTGGCGCACGCGCTAGGCAAGCGCACGGTGATGATCTTTATCGCCACTTCGCGGGAAACGTTTGAGAATAACGTGCCGT
TCCGCTCGGTTTCGATCGGGGACGGGAATTCAGTCCCGCCTGTTGCGGAGGCGCTGGCCGCCATCGATCACGTACACGCC
GACCCGCTGGCCGCCGGCGGCAACAAGGGCGAGTCGATGGCAGCGGCCTGA

Upstream 100 bases:

>100_bases
AGCGCCTCCGGCAAGATTTGCTGCTGCCCGTTTTGCGGGCAAATCCCAGGTTGCTCGGCTAAAATTACGGATTAGGCCGA
GCAGCCAGAACGGGCAATCA

Downstream 100 bases:

>100_bases
CCGGGCCGACGAGCGGGGCTTTGAAAGGAAAAAAGAAAAGAGGCGTACGCGCAGTTCGCCCAATTTCGGACGCCGTCGCG
AGACGCCTCTGAAAAGCCCG

Product: lipopolysaccharide heptosyltransferase I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKRILIVKVTSMGDVIQAQPIVSDLKRAFPGVEVDWAVDESFAEIARWNPGIDRVLCAPLRRFKKARRWADFRAIAQSIA
ELRAHRYDVAVDIHGVYKSAIIAFLSRSRRRLGYRNKDLGERGAAFAYTGRFVPPRDRNAWSGMRETVGTALGYSVDTPP
DYNLHIPAPAKPIVETGGRPLAMLFHAASKDDKKWPADHWIAIARELVRRGFHVVVPWGSPAERSEGLAIVDNVEGAELL
PQLSVTGIAQVIAASDFVIGVDTGFVHLAHALGKRTVMIFIATSRETFENNVPFRSVSIGDGNSVPPVAEALAAIDHVHA
DPLAAGGNKGESMAAA

Sequences:

>Translated_336_residues
MKRILIVKVTSMGDVIQAQPIVSDLKRAFPGVEVDWAVDESFAEIARWNPGIDRVLCAPLRRFKKARRWADFRAIAQSIA
ELRAHRYDVAVDIHGVYKSAIIAFLSRSRRRLGYRNKDLGERGAAFAYTGRFVPPRDRNAWSGMRETVGTALGYSVDTPP
DYNLHIPAPAKPIVETGGRPLAMLFHAASKDDKKWPADHWIAIARELVRRGFHVVVPWGSPAERSEGLAIVDNVEGAELL
PQLSVTGIAQVIAASDFVIGVDTGFVHLAHALGKRTVMIFIATSRETFENNVPFRSVSIGDGNSVPPVAEALAAIDHVHA
DPLAAGGNKGESMAAA
>Mature_336_residues
MKRILIVKVTSMGDVIQAQPIVSDLKRAFPGVEVDWAVDESFAEIARWNPGIDRVLCAPLRRFKKARRWADFRAIAQSIA
ELRAHRYDVAVDIHGVYKSAIIAFLSRSRRRLGYRNKDLGERGAAFAYTGRFVPPRDRNAWSGMRETVGTALGYSVDTPP
DYNLHIPAPAKPIVETGGRPLAMLFHAASKDDKKWPADHWIAIARELVRRGFHVVVPWGSPAERSEGLAIVDNVEGAELL
PQLSVTGIAQVIAASDFVIGVDTGFVHLAHALGKRTVMIFIATSRETFENNVPFRSVSIGDGNSVPPVAEALAAIDHVHA
DPLAAGGNKGESMAAA

Specific function: Heptose transfer to the lipopolysaccharide core. It transfers the innnermost heptose to [4'-P](3-deoxy-D-manno- octulosonic acid)2-IVA [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790051, Length=280, Percent_Identity=32.8571428571429, Blast_Score=161, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011908 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36653; Mature: 36653

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILIVKVTSMGDVIQAQPIVSDLKRAFPGVEVDWAVDESFAEIARWNPGIDRVLCAPL
CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHH
RRFKKARRWADFRAIAQSIAELRAHRYDVAVDIHGVYKSAIIAFLSRSRRRLGYRNKDLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC
ERGAAFAYTGRFVPPRDRNAWSGMRETVGTALGYSVDTPPDYNLHIPAPAKPIVETGGRP
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHCCCCC
LAMLFHAASKDDKKWPADHWIAIARELVRRGFHVVVPWGSPAERSEGLAIVDNVEGAELL
EEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCHHHH
PQLSVTGIAQVIAASDFVIGVDTGFVHLAHALGKRTVMIFIATSRETFENNVPFRSVSIG
HHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCEEEEEEEECCHHHHCCCCEEEEECC
DGNSVPPVAEALAAIDHVHADPLAAGGNKGESMAAA
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRILIVKVTSMGDVIQAQPIVSDLKRAFPGVEVDWAVDESFAEIARWNPGIDRVLCAPL
CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHH
RRFKKARRWADFRAIAQSIAELRAHRYDVAVDIHGVYKSAIIAFLSRSRRRLGYRNKDLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCC
ERGAAFAYTGRFVPPRDRNAWSGMRETVGTALGYSVDTPPDYNLHIPAPAKPIVETGGRP
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHCCCCC
LAMLFHAASKDDKKWPADHWIAIARELVRRGFHVVVPWGSPAERSEGLAIVDNVEGAELL
EEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCHHHH
PQLSVTGIAQVIAASDFVIGVDTGFVHLAHALGKRTVMIFIATSRETFENNVPFRSVSIG
HHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCEEEEEEEECCHHHHCCCCEEEEECC
DGNSVPPVAEALAAIDHVHADPLAAGGNKGESMAAA
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Glycosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478319; 8041620; 9278503; 1624462 [H]