| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475371
Identifier: 186475371
GI number: 186475371
Start: 682395
End: 682988
Strand: Direct
Name: 186475371
Synonym: Bphy_0604
Alternate gene names: NA
Gene position: 682395-682988 (Clockwise)
Preceding gene: 186475370
Following gene: 186475372
Centisome position: 19.61
GC content: 61.28
Gene sequence:
>594_bases ATGACCCCACCCGCCACGCCCGCACGGCGTCGCTTTCTGATTTCCGCGCTGTCCGCCTGTGTGACGGCGGGTATCACTGC GCCGCTCGTCGCGTGCGCAACGTCGACGTTTCCATTTATTCCGGATCACTACACGTTTTCGCAAAAGCAGGTTCAGGAGG CAGTCCAGCGCAAGTTTCCGTATCAGCGCACCGTGTCGCAGGTGTTCGATGTCGCGCTGGCCAATCCCGTCGTCGGCTTG TTGCCCGATACGAACCGCGTCTCCGTGCGGCTCGATGCGCGGCTCGCCAGTCCGTTCCTGCAGCAGCCGGTGAACGGTGT CTTCACGCTGTCGAGCCAGCTCGAATACGATGCACCAAGCCGTTCTGTCGTGCTGCGCGCGCCGAATGTGGACAACGTCA GCGTCGACGGTAACGCGCAAGCCTACACTCAGCAGATCAACGCGGCCGCCGCCGTGCTCGCGACCCAACTGCTGACCAAC TACCCCGTCTACACGTTCAAGCCCGAGCAGCTGCAATTTGCCGGCGTGAATTACGAACCCGGTACAATCACGGTCCTTAC AAACGGCATACGCGTGCAGATCGTCGAAAAGTGA
Upstream 100 bases:
>100_bases CACGGCCGTGATCGCCGGCGCCCGCCTGGCCCGATAGACGAAAGACAACCCAGCGAAAGCAATACCGGCGCGGCGGCCGC CGCGTTACAGGAGAATCTGC
Downstream 100 bases:
>100_bases CGCATGCGGGGCCGGGCGGCCGCGCCAGCATTGCTGACGCATCGCCCATCAACTCCAAGCGAAAAGGCCACGGATGGACT GGATCATCACGTTGAAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Lipoprotein
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTPPATPARRRFLISALSACVTAGITAPLVACATSTFPFIPDHYTFSQKQVQEAVQRKFPYQRTVSQVFDVALANPVVGL LPDTNRVSVRLDARLASPFLQQPVNGVFTLSSQLEYDAPSRSVVLRAPNVDNVSVDGNAQAYTQQINAAAAVLATQLLTN YPVYTFKPEQLQFAGVNYEPGTITVLTNGIRVQIVEK
Sequences:
>Translated_197_residues MTPPATPARRRFLISALSACVTAGITAPLVACATSTFPFIPDHYTFSQKQVQEAVQRKFPYQRTVSQVFDVALANPVVGL LPDTNRVSVRLDARLASPFLQQPVNGVFTLSSQLEYDAPSRSVVLRAPNVDNVSVDGNAQAYTQQINAAAAVLATQLLTN YPVYTFKPEQLQFAGVNYEPGTITVLTNGIRVQIVEK >Mature_196_residues TPPATPARRRFLISALSACVTAGITAPLVACATSTFPFIPDHYTFSQKQVQEAVQRKFPYQRTVSQVFDVALANPVVGLL PDTNRVSVRLDARLASPFLQQPVNGVFTLSSQLEYDAPSRSVVLRAPNVDNVSVDGNAQAYTQQINAAAAVLATQLLTNY PVYTFKPEQLQFAGVNYEPGTITVLTNGIRVQIVEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21427; Mature: 21295
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPATPARRRFLISALSACVTAGITAPLVACATSTFPFIPDHYTFSQKQVQEAVQRKFP CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC YQRTVSQVFDVALANPVVGLLPDTNRVSVRLDARLASPFLQQPVNGVFTLSSQLEYDAPS HHHHHHHHHHHHHHCCEEEECCCCCEEEEEECHHHHCHHHHCCCCCEEEECCCCCCCCCC RSVVLRAPNVDNVSVDGNAQAYTQQINAAAAVLATQLLTNYPVYTFKPEQLQFAGVNYEP CEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCC GTITVLTNGIRVQIVEK CEEEEEECCEEEEEEEC >Mature Secondary Structure TPPATPARRRFLISALSACVTAGITAPLVACATSTFPFIPDHYTFSQKQVQEAVQRKFP CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC YQRTVSQVFDVALANPVVGLLPDTNRVSVRLDARLASPFLQQPVNGVFTLSSQLEYDAPS HHHHHHHHHHHHHHCCEEEECCCCCEEEEEECHHHHCHHHHCCCCCEEEECCCCCCCCCC RSVVLRAPNVDNVSVDGNAQAYTQQINAAAAVLATQLLTNYPVYTFKPEQLQFAGVNYEP CEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCC GTITVLTNGIRVQIVEK CEEEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA