Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186475371

Identifier: 186475371

GI number: 186475371

Start: 682395

End: 682988

Strand: Direct

Name: 186475371

Synonym: Bphy_0604

Alternate gene names: NA

Gene position: 682395-682988 (Clockwise)

Preceding gene: 186475370

Following gene: 186475372

Centisome position: 19.61

GC content: 61.28

Gene sequence:

>594_bases
ATGACCCCACCCGCCACGCCCGCACGGCGTCGCTTTCTGATTTCCGCGCTGTCCGCCTGTGTGACGGCGGGTATCACTGC
GCCGCTCGTCGCGTGCGCAACGTCGACGTTTCCATTTATTCCGGATCACTACACGTTTTCGCAAAAGCAGGTTCAGGAGG
CAGTCCAGCGCAAGTTTCCGTATCAGCGCACCGTGTCGCAGGTGTTCGATGTCGCGCTGGCCAATCCCGTCGTCGGCTTG
TTGCCCGATACGAACCGCGTCTCCGTGCGGCTCGATGCGCGGCTCGCCAGTCCGTTCCTGCAGCAGCCGGTGAACGGTGT
CTTCACGCTGTCGAGCCAGCTCGAATACGATGCACCAAGCCGTTCTGTCGTGCTGCGCGCGCCGAATGTGGACAACGTCA
GCGTCGACGGTAACGCGCAAGCCTACACTCAGCAGATCAACGCGGCCGCCGCCGTGCTCGCGACCCAACTGCTGACCAAC
TACCCCGTCTACACGTTCAAGCCCGAGCAGCTGCAATTTGCCGGCGTGAATTACGAACCCGGTACAATCACGGTCCTTAC
AAACGGCATACGCGTGCAGATCGTCGAAAAGTGA

Upstream 100 bases:

>100_bases
CACGGCCGTGATCGCCGGCGCCCGCCTGGCCCGATAGACGAAAGACAACCCAGCGAAAGCAATACCGGCGCGGCGGCCGC
CGCGTTACAGGAGAATCTGC

Downstream 100 bases:

>100_bases
CGCATGCGGGGCCGGGCGGCCGCGCCAGCATTGCTGACGCATCGCCCATCAACTCCAAGCGAAAAGGCCACGGATGGACT
GGATCATCACGTTGAAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Lipoprotein

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MTPPATPARRRFLISALSACVTAGITAPLVACATSTFPFIPDHYTFSQKQVQEAVQRKFPYQRTVSQVFDVALANPVVGL
LPDTNRVSVRLDARLASPFLQQPVNGVFTLSSQLEYDAPSRSVVLRAPNVDNVSVDGNAQAYTQQINAAAAVLATQLLTN
YPVYTFKPEQLQFAGVNYEPGTITVLTNGIRVQIVEK

Sequences:

>Translated_197_residues
MTPPATPARRRFLISALSACVTAGITAPLVACATSTFPFIPDHYTFSQKQVQEAVQRKFPYQRTVSQVFDVALANPVVGL
LPDTNRVSVRLDARLASPFLQQPVNGVFTLSSQLEYDAPSRSVVLRAPNVDNVSVDGNAQAYTQQINAAAAVLATQLLTN
YPVYTFKPEQLQFAGVNYEPGTITVLTNGIRVQIVEK
>Mature_196_residues
TPPATPARRRFLISALSACVTAGITAPLVACATSTFPFIPDHYTFSQKQVQEAVQRKFPYQRTVSQVFDVALANPVVGLL
PDTNRVSVRLDARLASPFLQQPVNGVFTLSSQLEYDAPSRSVVLRAPNVDNVSVDGNAQAYTQQINAAAAVLATQLLTNY
PVYTFKPEQLQFAGVNYEPGTITVLTNGIRVQIVEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21427; Mature: 21295

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPATPARRRFLISALSACVTAGITAPLVACATSTFPFIPDHYTFSQKQVQEAVQRKFP
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
YQRTVSQVFDVALANPVVGLLPDTNRVSVRLDARLASPFLQQPVNGVFTLSSQLEYDAPS
HHHHHHHHHHHHHHCCEEEECCCCCEEEEEECHHHHCHHHHCCCCCEEEECCCCCCCCCC
RSVVLRAPNVDNVSVDGNAQAYTQQINAAAAVLATQLLTNYPVYTFKPEQLQFAGVNYEP
CEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCC
GTITVLTNGIRVQIVEK
CEEEEEECCEEEEEEEC
>Mature Secondary Structure 
TPPATPARRRFLISALSACVTAGITAPLVACATSTFPFIPDHYTFSQKQVQEAVQRKFP
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
YQRTVSQVFDVALANPVVGLLPDTNRVSVRLDARLASPFLQQPVNGVFTLSSQLEYDAPS
HHHHHHHHHHHHHHCCEEEECCCCCEEEEEECHHHHCHHHHCCCCCEEEECCCCCCCCCC
RSVVLRAPNVDNVSVDGNAQAYTQQINAAAAVLATQLLTNYPVYTFKPEQLQFAGVNYEP
CEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCC
GTITVLTNGIRVQIVEK
CEEEEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA