| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yeaE [H]
Identifier: 186475321
GI number: 186475321
Start: 625881
End: 626726
Strand: Direct
Name: yeaE [H]
Synonym: Bphy_0553
Alternate gene names: 186475321
Gene position: 625881-626726 (Clockwise)
Preceding gene: 186475319
Following gene: 186475322
Centisome position: 17.99
GC content: 65.13
Gene sequence:
>846_bases ATGACGAACGACATCGCCAGCGTGACGCTGCCCGACGGCGAACGCATTCCGAAACTCGGGCAGGGCACGTGGGAGATGGG CGAAAATCCGTCGCGCCGCAAGGCTGAAATCGACGCGCTGCGCGGCGGCATCGAACTCGGCATGACGCTCATCGACACAG CCGAAATGTACGGCGAAGGCGCAACGGAATCGCTGCTCGGCGAAGCGTTGCATGGCCTGCGCGACGAGGTCTTTCTCGTC AGCAAGGTGTATCCGCACAACGCGAGCCGGCGCGGCGTGCAGCATGCATGCGAGCAGTCGTTGAGGCGTCTGAAGACCGA TCGCATTGATCTGTATCTGCTGCACTGGCGCGGCTCGGTGCCGCTCGAAGAGACGGTCGCGGGCTTCGAGGCGTTGCGCC GCGACGGCAAGATCCGGCACTGGGGCGTGAGCAACTTCGACGTCGACGATATGGAAGAACTCGTCGGCGTGACGGACGGC GATGCGTGTGCGACGAACCAGATTCTTTATAACGTCGCGCGGCGCGGCCCGGAGTTCGACCTGCTACCGTGGCTCGCGGC CCGCAAGATGCCCGCGATGGCGTACAGCCCCGTCGATCACGCACGCCTGCCCAAGCGCTCGCCGCTCGACGATATCGCGG GCAGGCTTGGCGTATCGGCGGTTCAGGTCGCGCTTGCATGGGTGCTGCGGCAGCCCGATGTGCTGGCCATTCCGAAGTCA GGACGCATCGAGCACGTGCGAGACAACCGTCGCGCACTCGAACTGCCGCTTTCAGCCGACGACCTCGCCGCGATCGATGC ACACTTTCGTGCGCCGCGCAGCAAGCGGCCGCTCGAGATGCTGTGA
Upstream 100 bases:
>100_bases ATGCGCATCGACGTCCGGCGCTACACTCGCTGGTTGAGCCGCTGCATCGATCGTTGCCACGCAGCGTATCTTCATGCCAT CACTAGCGAGGACCGCAACC
Downstream 100 bases:
>100_bases GCGGCGCATGTGCCCGATGCTCCGCGGGAGCCGATCAGCCGATGATTCGCACGCGTGATGCATGTGCACCGAGCCGAGCA CGGCGACTTCGGCGGGCGTG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTNDIASVTLPDGERIPKLGQGTWEMGENPSRRKAEIDALRGGIELGMTLIDTAEMYGEGATESLLGEALHGLRDEVFLV SKVYPHNASRRGVQHACEQSLRRLKTDRIDLYLLHWRGSVPLEETVAGFEALRRDGKIRHWGVSNFDVDDMEELVGVTDG DACATNQILYNVARRGPEFDLLPWLAARKMPAMAYSPVDHARLPKRSPLDDIAGRLGVSAVQVALAWVLRQPDVLAIPKS GRIEHVRDNRRALELPLSADDLAAIDAHFRAPRSKRPLEML
Sequences:
>Translated_281_residues MTNDIASVTLPDGERIPKLGQGTWEMGENPSRRKAEIDALRGGIELGMTLIDTAEMYGEGATESLLGEALHGLRDEVFLV SKVYPHNASRRGVQHACEQSLRRLKTDRIDLYLLHWRGSVPLEETVAGFEALRRDGKIRHWGVSNFDVDDMEELVGVTDG DACATNQILYNVARRGPEFDLLPWLAARKMPAMAYSPVDHARLPKRSPLDDIAGRLGVSAVQVALAWVLRQPDVLAIPKS GRIEHVRDNRRALELPLSADDLAAIDAHFRAPRSKRPLEML >Mature_280_residues TNDIASVTLPDGERIPKLGQGTWEMGENPSRRKAEIDALRGGIELGMTLIDTAEMYGEGATESLLGEALHGLRDEVFLVS KVYPHNASRRGVQHACEQSLRRLKTDRIDLYLLHWRGSVPLEETVAGFEALRRDGKIRHWGVSNFDVDDMEELVGVTDGD ACATNQILYNVARRGPEFDLLPWLAARKMPAMAYSPVDHARLPKRSPLDDIAGRLGVSAVQVALAWVLRQPDVLAIPKSG RIEHVRDNRRALELPLSADDLAAIDAHFRAPRSKRPLEML
Specific function: Unknown
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24497577, Length=300, Percent_Identity=25.3333333333333, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI5174391, Length=300, Percent_Identity=25.3333333333333, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI310109922, Length=290, Percent_Identity=27.5862068965517, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI5453543, Length=317, Percent_Identity=27.4447949526814, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI45446745, Length=317, Percent_Identity=27.4447949526814, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI4503285, Length=317, Percent_Identity=27.4447949526814, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI223468663, Length=309, Percent_Identity=25.5663430420712, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI310109920, Length=317, Percent_Identity=27.4447949526814, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI24497585, Length=307, Percent_Identity=27.0358306188925, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI24497583, Length=310, Percent_Identity=27.0967741935484, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI223718702, Length=187, Percent_Identity=28.8770053475936, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI4502049, Length=298, Percent_Identity=26.510067114094, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1788081, Length=271, Percent_Identity=54.2435424354244, Blast_Score=300, Evalue=6e-83, Organism=Escherichia coli, GI1786400, Length=267, Percent_Identity=28.8389513108614, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787674, Length=279, Percent_Identity=27.5985663082437, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1788070, Length=304, Percent_Identity=27.6315789473684, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI87082198, Length=266, Percent_Identity=28.1954887218045, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI87081735, Length=296, Percent_Identity=25, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789199, Length=325, Percent_Identity=28.6153846153846, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI48994888, Length=276, Percent_Identity=30.7971014492754, Blast_Score=83, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17561298, Length=297, Percent_Identity=29.6296296296296, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17552492, Length=269, Percent_Identity=28.6245353159851, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71998625, Length=284, Percent_Identity=26.056338028169, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17564128, Length=310, Percent_Identity=26.7741935483871, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17566692, Length=174, Percent_Identity=28.735632183908, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17550248, Length=304, Percent_Identity=23.0263157894737, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17561300, Length=272, Percent_Identity=27.2058823529412, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17538386, Length=282, Percent_Identity=26.241134751773, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320576, Length=314, Percent_Identity=27.7070063694268, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6324694, Length=304, Percent_Identity=27.6315789473684, Blast_Score=90, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6320079, Length=284, Percent_Identity=25.7042253521127, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI24644950, Length=307, Percent_Identity=26.7100977198697, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24662789, Length=297, Percent_Identity=26.9360269360269, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24657054, Length=301, Percent_Identity=25.2491694352159, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI45553081, Length=296, Percent_Identity=26.0135135135135, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI20129731, Length=313, Percent_Identity=24.2811501597444, Blast_Score=75, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 31252; Mature: 31121
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNDIASVTLPDGERIPKLGQGTWEMGENPSRRKAEIDALRGGIELGMTLIDTAEMYGEG CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ATESLLGEALHGLRDEVFLVSKVYPHNASRRGVQHACEQSLRRLKTDRIDLYLLHWRGSV CHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC PLEETVAGFEALRRDGKIRHWGVSNFDVDDMEELVGVTDGDACATNQILYNVARRGPEFD CHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC LLPWLAARKMPAMAYSPVDHARLPKRSPLDDIAGRLGVSAVQVALAWVLRQPDVLAIPKS HHHHHHHHCCCCHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC GRIEHVRDNRRALELPLSADDLAAIDAHFRAPRSKRPLEML CCCHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TNDIASVTLPDGERIPKLGQGTWEMGENPSRRKAEIDALRGGIELGMTLIDTAEMYGEG CCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ATESLLGEALHGLRDEVFLVSKVYPHNASRRGVQHACEQSLRRLKTDRIDLYLLHWRGSV CHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC PLEETVAGFEALRRDGKIRHWGVSNFDVDDMEELVGVTDGDACATNQILYNVARRGPEFD CHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC LLPWLAARKMPAMAYSPVDHARLPKRSPLDDIAGRLGVSAVQVALAWVLRQPDVLAIPKS HHHHHHHHCCCCHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC GRIEHVRDNRRALELPLSADDLAAIDAHFRAPRSKRPLEML CCCHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]