| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475225
Identifier: 186475225
GI number: 186475225
Start: 519159
End: 519914
Strand: Direct
Name: 186475225
Synonym: Bphy_0457
Alternate gene names: NA
Gene position: 519159-519914 (Clockwise)
Preceding gene: 186475218
Following gene: 186475226
Centisome position: 14.92
GC content: 65.61
Gene sequence:
>756_bases ATGCTCGCTCGCTTGTCCGAACTCGACCGCCGTGCCTTCCGTGATGGTGCGCGCGCCTATTCGCCGACGCTGATGGCGAT CTTCTCCTGGGGCCTCGTGACGGGCATCGCCATGAGCAAGTCGGTGATGACCGTGCCGCAGTCGCTCGCGATGTCGCTGC TGGTCTACGCTGGCTCGTCGCAATTGGCCGTCCTGCCGCTGATGCTGGCCAAGCTGCCCATCTGGACGATCCTGCTGACG GCCGCGATGGTGAATACGCGCTTCGTGATCTTCAGCGTGGGTCTTGCGCCTCACTTCTCCTATCTGCCGCTGCACCGGCG TCTGCTGGTCGGCTACTTCAACGGCGACGTCATCTATCTGCTGTTCCAGAAGAAGAGCTTCCAGCACGGCTACGTGCCCG GCAAGGAAGCGTACTTTTGGGGCATGGCCGTTTCGAGCTGGCTGTCGTGGCAGGTGTCGTCGATCATGGGCATCCTGCTC GCCAGCCTGTTTCCGGACAACTGGGGCCTTTCGCTTGCGGGCACGCTCGCGCTGCTCCCCGTGATGGTGTCGGCCATATC CTCGCGCTCGACGCTGGCGGCCGTGAGCGTTGCGGGCATCGTCGCGCTGATCGCATTCGATCTGCCGTACCGTCTCGCGC TGCCGCTCGCCGTCGTGACGGCCATCGCGGCGGGCACGGCGGCCGACGCGCTGGTCGAGCGCGCCGACCTGCGCCGCATT CGCAACAGCACGCGAAGCCCGGGGGACACGCAATGA
Upstream 100 bases:
>100_bases CGGTTGCTGAATACAAGCCGCGTGCGCCAGCGGCTGCTTCATGATCTGGCGCTGACCTCCTGTCATCGGGGCGTTCGTCG CGCCGCGCTGCATCCGTCTC
Downstream 100 bases:
>100_bases GCACACTGCAAATCTGGCTCGCGATCATCGGCATGACGTTTGTCACAGCGCTGACACGCGCGCTGTTTCTGATCGGGGGG GAGCGCACGGTGCTGCCCGA
Product: AzlC family protein
Products: NA
Alternate protein names: Branched-Chain Amino Acid Transport Protein AzlC; Branched-Chain Amino Acid Permease; AzlC-Like; Inner Membrane Protein; AzlC-Like Protein; Branched Chain Amino Acid Efflux Pump LivE; AzlC Protein; AzlC Family Branched-Chain Amino Acid Transporter; Inner Membrane Protein YgaZ; AzlC Family; Azaleucine Resistance Protein AzlC; Integral Membrane Protein; Azlc Family Protein; Amino Acid Permease; Branched Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MLARLSELDRRAFRDGARAYSPTLMAIFSWGLVTGIAMSKSVMTVPQSLAMSLLVYAGSSQLAVLPLMLAKLPIWTILLT AAMVNTRFVIFSVGLAPHFSYLPLHRRLLVGYFNGDVIYLLFQKKSFQHGYVPGKEAYFWGMAVSSWLSWQVSSIMGILL ASLFPDNWGLSLAGTLALLPVMVSAISSRSTLAAVSVAGIVALIAFDLPYRLALPLAVVTAIAAGTAADALVERADLRRI RNSTRSPGDTQ
Sequences:
>Translated_251_residues MLARLSELDRRAFRDGARAYSPTLMAIFSWGLVTGIAMSKSVMTVPQSLAMSLLVYAGSSQLAVLPLMLAKLPIWTILLT AAMVNTRFVIFSVGLAPHFSYLPLHRRLLVGYFNGDVIYLLFQKKSFQHGYVPGKEAYFWGMAVSSWLSWQVSSIMGILL ASLFPDNWGLSLAGTLALLPVMVSAISSRSTLAAVSVAGIVALIAFDLPYRLALPLAVVTAIAAGTAADALVERADLRRI RNSTRSPGDTQ >Mature_251_residues MLARLSELDRRAFRDGARAYSPTLMAIFSWGLVTGIAMSKSVMTVPQSLAMSLLVYAGSSQLAVLPLMLAKLPIWTILLT AAMVNTRFVIFSVGLAPHFSYLPLHRRLLVGYFNGDVIYLLFQKKSFQHGYVPGKEAYFWGMAVSSWLSWQVSSIMGILL ASLFPDNWGLSLAGTLALLPVMVSAISSRSTLAAVSVAGIVALIAFDLPYRLALPLAVVTAIAAGTAADALVERADLRRI RNSTRSPGDTQ
Specific function: Unknown
COG id: COG1296
COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27167; Mature: 27167
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARLSELDRRAFRDGARAYSPTLMAIFSWGLVTGIAMSKSVMTVPQSLAMSLLVYAGSS CCCHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QLAVLPLMLAKLPIWTILLTAAMVNTRFVIFSVGLAPHFSYLPLHRRLLVGYFNGDVIYL CHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHEEEEECCCEEEE LFQKKSFQHGYVPGKEAYFWGMAVSSWLSWQVSSIMGILLASLFPDNWGLSLAGTLALLP EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH VMVSAISSRSTLAAVSVAGIVALIAFDLPYRLALPLAVVTAIAAGTAADALVERADLRRI HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH RNSTRSPGDTQ HHCCCCCCCCC >Mature Secondary Structure MLARLSELDRRAFRDGARAYSPTLMAIFSWGLVTGIAMSKSVMTVPQSLAMSLLVYAGSS CCCHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QLAVLPLMLAKLPIWTILLTAAMVNTRFVIFSVGLAPHFSYLPLHRRLLVGYFNGDVIYL CHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHEEEEECCCEEEE LFQKKSFQHGYVPGKEAYFWGMAVSSWLSWQVSSIMGILLASLFPDNWGLSLAGTLALLP EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH VMVSAISSRSTLAAVSVAGIVALIAFDLPYRLALPLAVVTAIAAGTAADALVERADLRRI HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH RNSTRSPGDTQ HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA