| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475141
Identifier: 186475141
GI number: 186475141
Start: 424454
End: 424882
Strand: Direct
Name: 186475141
Synonym: Bphy_0372
Alternate gene names: NA
Gene position: 424454-424882 (Clockwise)
Preceding gene: 186475140
Following gene: 186475142
Centisome position: 12.2
GC content: 65.03
Gene sequence:
>429_bases ATGGACTGTATCTTCTGCCGTGAGGACGGCGGTGACGTGCTGTGGCAGGACGAGACGCTGCGTGTCGTCCTCGCCGACGA ACACGACTACCCGGGCTTTTGCCGGGTGATCTGGAACCGGCACGTGGCCGAGTTCTCCGATCTGGGCGACGGCGAGCGCG ATCGCGTGATGCGCGTGGTGTACGCGGTCGAGCGTGCGATCAGGCGCATCCTGCAACCCGTCAAGGTGAATCTGGCAAGT CTCGGCAACCAGGTGCCGCACGTGCACTGGCACGTGATCCCGCGCTTTTCCAACGACGCGCATTTTCCGCTGCCCATCTG GGCGCCGCGCCAACGTACGGTCTCCGAGGTGATGCTGTCGCAGCGACGCGCGCAGGCGACGCTGCTGCGCGAAGCGGTAC GCAGCGAAATCGAACACGCTCTCGTCTAG
Upstream 100 bases:
>100_bases GCGAGAACTGGATGGCGGATTACGTTCAGCATGCGAACAATGGCGGAATCGAGCGCGTGCTGGTCTAATGGCACGATAAA GGCTCCGCTCGAGGACGACG
Downstream 100 bases:
>100_bases AGGTCATCATGAGTGGATTGACACCCGACACGCCCGTGCCTACGGGCGTCGTCGTTCATGCCGTATCGCGCGTGCTGGAA CTGCAGTACGCGAACGGCAA
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Diadenosine Tetraphosphate Hydrolase; HIT Family Protein; Histidine Triad-Like; Histidine Triad Family Hydrolase; HIT Domain-Containing Protein; HIT Domain-Containing
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MDCIFCREDGGDVLWQDETLRVVLADEHDYPGFCRVIWNRHVAEFSDLGDGERDRVMRVVYAVERAIRRILQPVKVNLAS LGNQVPHVHWHVIPRFSNDAHFPLPIWAPRQRTVSEVMLSQRRAQATLLREAVRSEIEHALV
Sequences:
>Translated_142_residues MDCIFCREDGGDVLWQDETLRVVLADEHDYPGFCRVIWNRHVAEFSDLGDGERDRVMRVVYAVERAIRRILQPVKVNLAS LGNQVPHVHWHVIPRFSNDAHFPLPIWAPRQRTVSEVMLSQRRAQATLLREAVRSEIEHALV >Mature_142_residues MDCIFCREDGGDVLWQDETLRVVLADEHDYPGFCRVIWNRHVAEFSDLGDGERDRVMRVVYAVERAIRRILQPVKVNLAS LGNQVPHVHWHVIPRFSNDAHFPLPIWAPRQRTVSEVMLSQRRAQATLLREAVRSEIEHALV
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16503; Mature: 16503
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCIFCREDGGDVLWQDETLRVVLADEHDYPGFCRVIWNRHVAEFSDLGDGERDRVMRVV CCEEEEECCCCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH YAVERAIRRILQPVKVNLASLGNQVPHVHWHVIPRFSNDAHFPLPIWAPRQRTVSEVMLS HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH QRRAQATLLREAVRSEIEHALV HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDCIFCREDGGDVLWQDETLRVVLADEHDYPGFCRVIWNRHVAEFSDLGDGERDRVMRVV CCEEEEECCCCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH YAVERAIRRILQPVKVNLASLGNQVPHVHWHVIPRFSNDAHFPLPIWAPRQRTVSEVMLS HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH QRRAQATLLREAVRSEIEHALV HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA