Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475141

Identifier: 186475141

GI number: 186475141

Start: 424454

End: 424882

Strand: Direct

Name: 186475141

Synonym: Bphy_0372

Alternate gene names: NA

Gene position: 424454-424882 (Clockwise)

Preceding gene: 186475140

Following gene: 186475142

Centisome position: 12.2

GC content: 65.03

Gene sequence:

>429_bases
ATGGACTGTATCTTCTGCCGTGAGGACGGCGGTGACGTGCTGTGGCAGGACGAGACGCTGCGTGTCGTCCTCGCCGACGA
ACACGACTACCCGGGCTTTTGCCGGGTGATCTGGAACCGGCACGTGGCCGAGTTCTCCGATCTGGGCGACGGCGAGCGCG
ATCGCGTGATGCGCGTGGTGTACGCGGTCGAGCGTGCGATCAGGCGCATCCTGCAACCCGTCAAGGTGAATCTGGCAAGT
CTCGGCAACCAGGTGCCGCACGTGCACTGGCACGTGATCCCGCGCTTTTCCAACGACGCGCATTTTCCGCTGCCCATCTG
GGCGCCGCGCCAACGTACGGTCTCCGAGGTGATGCTGTCGCAGCGACGCGCGCAGGCGACGCTGCTGCGCGAAGCGGTAC
GCAGCGAAATCGAACACGCTCTCGTCTAG

Upstream 100 bases:

>100_bases
GCGAGAACTGGATGGCGGATTACGTTCAGCATGCGAACAATGGCGGAATCGAGCGCGTGCTGGTCTAATGGCACGATAAA
GGCTCCGCTCGAGGACGACG

Downstream 100 bases:

>100_bases
AGGTCATCATGAGTGGATTGACACCCGACACGCCCGTGCCTACGGGCGTCGTCGTTCATGCCGTATCGCGCGTGCTGGAA
CTGCAGTACGCGAACGGCAA

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Diadenosine Tetraphosphate Hydrolase; HIT Family Protein; Histidine Triad-Like; Histidine Triad Family Hydrolase; HIT Domain-Containing Protein; HIT Domain-Containing

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDCIFCREDGGDVLWQDETLRVVLADEHDYPGFCRVIWNRHVAEFSDLGDGERDRVMRVVYAVERAIRRILQPVKVNLAS
LGNQVPHVHWHVIPRFSNDAHFPLPIWAPRQRTVSEVMLSQRRAQATLLREAVRSEIEHALV

Sequences:

>Translated_142_residues
MDCIFCREDGGDVLWQDETLRVVLADEHDYPGFCRVIWNRHVAEFSDLGDGERDRVMRVVYAVERAIRRILQPVKVNLAS
LGNQVPHVHWHVIPRFSNDAHFPLPIWAPRQRTVSEVMLSQRRAQATLLREAVRSEIEHALV
>Mature_142_residues
MDCIFCREDGGDVLWQDETLRVVLADEHDYPGFCRVIWNRHVAEFSDLGDGERDRVMRVVYAVERAIRRILQPVKVNLAS
LGNQVPHVHWHVIPRFSNDAHFPLPIWAPRQRTVSEVMLSQRRAQATLLREAVRSEIEHALV

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16503; Mature: 16503

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCIFCREDGGDVLWQDETLRVVLADEHDYPGFCRVIWNRHVAEFSDLGDGERDRVMRVV
CCEEEEECCCCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YAVERAIRRILQPVKVNLASLGNQVPHVHWHVIPRFSNDAHFPLPIWAPRQRTVSEVMLS
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
QRRAQATLLREAVRSEIEHALV
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDCIFCREDGGDVLWQDETLRVVLADEHDYPGFCRVIWNRHVAEFSDLGDGERDRVMRVV
CCEEEEECCCCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YAVERAIRRILQPVKVNLASLGNQVPHVHWHVIPRFSNDAHFPLPIWAPRQRTVSEVMLS
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
QRRAQATLLREAVRSEIEHALV
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA