Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475128

Identifier: 186475128

GI number: 186475128

Start: 407255

End: 407689

Strand: Direct

Name: 186475128

Synonym: Bphy_0359

Alternate gene names: NA

Gene position: 407255-407689 (Clockwise)

Preceding gene: 186475127

Following gene: 186475129

Centisome position: 11.71

GC content: 62.3

Gene sequence:

>435_bases
ATGATTGCGATTCGAAAGCTGAGCATGGTGGCAGTGATATGCGCGCTGGCGTCGGGTGTTGCGCTCGCGGATACGGTGGA
GCTGAAGGCGGACCTTGAGCCGTCGAGCGAAGTGCCTCCGCGCGTGAGTCACGGACATGGCGCATTGGAGGCCACCTTCG
ATACGTCGACCCGGACACTCAAGTGGACGACCACTTACGACGGTCTGTCGGGCCCGGTGACGATGGCGCACTTCCACGGT
CCGGCGCCCGTCGGCCAGAACGCGAAGGTACAGGTCCCTATCGAGAAGAATGCGCTGGCGAGCCCGATGAAGGGTTCGGC
GACACTCACGGAGCAACAGGTTACGGACCTGATGGCGGGCCAGTGGTACTTCAACATTCACACTGCGCAAAACCCGTCCG
GCGAGATCCGCGGTCAGGTGCTGCCGGCAAATTAG

Upstream 100 bases:

>100_bases
CTTCGAATTGCACTAGTATGTGCTGGCGCATGAGTTGGCACGGTTCGGTCTTTGCACATGAAGCGATGCCGGCGCGGCGC
ACAAAGACTCGGAGAGAACA

Downstream 100 bases:

>100_bases
ACGAATCAGGCAGGGCAACATAATGGCCGGAACCGCCAACAGCGGTTCCGGCCATTTGCGATTCGAACGAAGACCAGTCA
TGCGCGCGTTCAGTAGAAGC

Product: CHRD domain-containing protein

Products: NA

Alternate protein names: CHRD Domain Containing Protein; Beta-Ig-H3/Fasciclin; Signal Peptide; CHRD Domain-Containing Superfamily; Chordin

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MIAIRKLSMVAVICALASGVALADTVELKADLEPSSEVPPRVSHGHGALEATFDTSTRTLKWTTTYDGLSGPVTMAHFHG
PAPVGQNAKVQVPIEKNALASPMKGSATLTEQQVTDLMAGQWYFNIHTAQNPSGEIRGQVLPAN

Sequences:

>Translated_144_residues
MIAIRKLSMVAVICALASGVALADTVELKADLEPSSEVPPRVSHGHGALEATFDTSTRTLKWTTTYDGLSGPVTMAHFHG
PAPVGQNAKVQVPIEKNALASPMKGSATLTEQQVTDLMAGQWYFNIHTAQNPSGEIRGQVLPAN
>Mature_144_residues
MIAIRKLSMVAVICALASGVALADTVELKADLEPSSEVPPRVSHGHGALEATFDTSTRTLKWTTTYDGLSGPVTMAHFHG
PAPVGQNAKVQVPIEKNALASPMKGSATLTEQQVTDLMAGQWYFNIHTAQNPSGEIRGQVLPAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15234; Mature: 15234

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50933 CHRD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAIRKLSMVAVICALASGVALADTVELKADLEPSSEVPPRVSHGHGALEATFDTSTRTL
CEEEHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEE
KWTTTYDGLSGPVTMAHFHGPAPVGQNAKVQVPIEKNALASPMKGSATLTEQQVTDLMAG
EEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEHHHHHHHHHCC
QWYFNIHTAQNPSGEIRGQVLPAN
CEEEEEECCCCCCCCEEEEEEECC
>Mature Secondary Structure
MIAIRKLSMVAVICALASGVALADTVELKADLEPSSEVPPRVSHGHGALEATFDTSTRTL
CEEEHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEE
KWTTTYDGLSGPVTMAHFHGPAPVGQNAKVQVPIEKNALASPMKGSATLTEQQVTDLMAG
EEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEHHHHHHHHHCC
QWYFNIHTAQNPSGEIRGQVLPAN
CEEEEEECCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA