Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475022

Identifier: 186475022

GI number: 186475022

Start: 298229

End: 298702

Strand: Direct

Name: 186475022

Synonym: Bphy_0253

Alternate gene names: NA

Gene position: 298229-298702 (Clockwise)

Preceding gene: 186475020

Following gene: 186475025

Centisome position: 8.57

GC content: 56.12

Gene sequence:

>474_bases
ATGTTTCTCACCCAACGCTCATGGTCGGTCGACGACCGAGTCGCTATCGCATTGTCCGCGCCTTTTCACCCTTGGAAATC
GATCGCCTTCGCAACGACCGAACCGAAATTCTTAGTGGAATTTGGGAATTCTTATGCCAACGATGGCGGCTTTCGTTACC
TTCTCGTTTCGGGGGTCGAGACGCTTGCGCAGATGGGAGTCGCACCTGGCACAGTCATCGACTCGGTACACTATCTTTCG
TGCGAAGGCCGTTGCCATCCCCCTGTGCTAGACGCCCTCTGGGAAATTCGTCGCATATCCTCGCCCGACGAACCTGCGCA
GTACGCCTATCGCCGAGAAGACGGCACGTGGTCCGGGATCGGCCAATGGCCAATCACGCACGTGGTTCCATTTGAGCATC
AAACGGTGGTCTTCGCGCTTCGCTTTGGACCAACGAATCTGCAGGTTGGAAAGGATGCTTCCCAGGGCAATTGA

Upstream 100 bases:

>100_bases
GACATCCGCGGAATACTGGATTTCCGGTGCTTTTCCGTCAGTAGCTTTTACGTCACAATTCGCTCTCCGCGTAATCCGAA
AACCTGATCACGATCGAAAT

Downstream 100 bases:

>100_bases
AAGTTTGATGATCTGTTCTACTGCTCTAGCCTATGAGCGAAGCCCCGTGTGCACAACTGAGCTGTCCACACCACAAGGGC
GTGGACAGCCGCCTTCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MFLTQRSWSVDDRVAIALSAPFHPWKSIAFATTEPKFLVEFGNSYANDGGFRYLLVSGVETLAQMGVAPGTVIDSVHYLS
CEGRCHPPVLDALWEIRRISSPDEPAQYAYRREDGTWSGIGQWPITHVVPFEHQTVVFALRFGPTNLQVGKDASQGN

Sequences:

>Translated_157_residues
MFLTQRSWSVDDRVAIALSAPFHPWKSIAFATTEPKFLVEFGNSYANDGGFRYLLVSGVETLAQMGVAPGTVIDSVHYLS
CEGRCHPPVLDALWEIRRISSPDEPAQYAYRREDGTWSGIGQWPITHVVPFEHQTVVFALRFGPTNLQVGKDASQGN
>Mature_157_residues
MFLTQRSWSVDDRVAIALSAPFHPWKSIAFATTEPKFLVEFGNSYANDGGFRYLLVSGVETLAQMGVAPGTVIDSVHYLS
CEGRCHPPVLDALWEIRRISSPDEPAQYAYRREDGTWSGIGQWPITHVVPFEHQTVVFALRFGPTNLQVGKDASQGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17455; Mature: 17455

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLTQRSWSVDDRVAIALSAPFHPWKSIAFATTEPKFLVEFGNSYANDGGFRYLLVSGVE
CCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEHHHHH
TLAQMGVAPGTVIDSVHYLSCEGRCHPPVLDALWEIRRISSPDEPAQYAYRREDGTWSGI
HHHHHCCCCCHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCCC
GQWPITHVVPFEHQTVVFALRFGPTNLQVGKDASQGN
CCCCCEEEECCCCCEEEEEEEECCCCEEECCCCCCCC
>Mature Secondary Structure
MFLTQRSWSVDDRVAIALSAPFHPWKSIAFATTEPKFLVEFGNSYANDGGFRYLLVSGVE
CCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEHHHHH
TLAQMGVAPGTVIDSVHYLSCEGRCHPPVLDALWEIRRISSPDEPAQYAYRREDGTWSGI
HHHHHCCCCCHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCCC
GQWPITHVVPFEHQTVVFALRFGPTNLQVGKDASQGN
CCCCCEEEECCCCCEEEEEEEECCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA