| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475003
Identifier: 186475003
GI number: 186475003
Start: 261016
End: 262260
Strand: Direct
Name: 186475003
Synonym: Bphy_0234
Alternate gene names: NA
Gene position: 261016-262260 (Clockwise)
Preceding gene: 186475002
Following gene: 186475005
Centisome position: 7.5
GC content: 51.57
Gene sequence:
>1245_bases ATGATCGAACGGAATGCATCGGAGTTTGGTGGTGGCAGATTGTCGTGGAAACGATTCGGCGCGAAGCGATATGTCGTCGC GTATGATCCCGTCACTATGGGAATAGTATGGCCCTTAGTTGACTACGCAATCTTTCTCACTGATAGAATTGGGAGCGATC CGAAGACTGTCGAGTCTGCGATACTTGGCGTTGCGGCGTACAGGTACTTTTTGGTTGTAGTTTCGAAGGATGACAATCGA CGCACAGAGAAAAAACTCGGATCGTTGGGGTTTGAGGAGTCGACCGATACACTTCTCCGATCTTTCCGGGATCAGGAAGT CGAAAGGGTTTGTAGGCGAATAAACTCCAATCATGACAAGATGACAGCGCAACGTACTGTCAATGCCAAGCTTATACATA TCTACCATTTCCTTAACTGGTATAGGTGCACGCACAATCTTGAGTATTTTTTGGGCCCTAGCCAATGCTCTATCGCTTCA ACTCTAGGTGACAGTGACGTAAATTCGCGAAGGCGCGGTCGATACGAGTCAAGAACGTATGAGCGATATCCTCTCCTGTT CAGGAGGGTGCATGAGAACCCCCGGACGGTTCGCGCCTACGTCGCTACGGAAAAAGACAAAGCGTACATAAGAGACTACT TCAGGGCAAACTTTACGTACTTCGTCGCCGTAAGGAATCTCCTGATTATGGAAATTGCGGATCGAGTCGGTTGGCGGCGG GAATCCATTAACTCTCTTGCTTGTGAACAGTTTTCGCCAGGTAGGCTTGAGGCGATGGACGCTCGCGGGCTCGCCTGCGT ACCAGATCGGCAAAAGTTCGGCTATCGGGATGCGTTCTATATTCCGCCGTCTTTAGCCATCGAGATTGCTTCCTTTATCA ATGATGTGCGCTCGACCTTCCTGGAGGAAATGGGCTGGTTCGATAAAGTGGCGACAGGACCTGTGTTCATCTCAGCTCGG GACGGTAATGGTTTGACAGATAAATCCATCTCGAAAATATTTGGGCGAGCATTTGCCGCAGCAGGTGCGCCCCGGCGCGC CGGCATTAAAAGCTTTCGATCCAAGTTCGCTAACGACGCAATTGCGGCGGAAACCCTCGCGAGGCTAGAACTTGGACTAG ATACTAGTGCTCCCTCAGTGGCGGCGGCCGTTTCGGTTGATCTCGGGCACAGCCATCCGGAGTCAATCCGTGCATACGTA GAGCAGCATCAGTCACGGCTCGCCAGCCGCAAGCGAAACCCTTAG
Upstream 100 bases:
>100_bases GTATGCACTTCAAAAGCGCTTCCGCGATGAAGTGTCAAAGGCCGTCGAGTCCAAGACCGCCGTGAAAGGTGCAGTTGTGA CACGCCTCAAGTGAGGAAGT
Downstream 100 bases:
>100_bases CTCCGGATGAGCTAAAAAACGCGCGATTGTCCACTGAACACTGAAATCGTCATTCATTGTTGGCCTTTCTTTCAGTATCG AAAGATTGACACAACGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MIERNASEFGGGRLSWKRFGAKRYVVAYDPVTMGIVWPLVDYAIFLTDRIGSDPKTVESAILGVAAYRYFLVVVSKDDNR RTEKKLGSLGFEESTDTLLRSFRDQEVERVCRRINSNHDKMTAQRTVNAKLIHIYHFLNWYRCTHNLEYFLGPSQCSIAS TLGDSDVNSRRRGRYESRTYERYPLLFRRVHENPRTVRAYVATEKDKAYIRDYFRANFTYFVAVRNLLIMEIADRVGWRR ESINSLACEQFSPGRLEAMDARGLACVPDRQKFGYRDAFYIPPSLAIEIASFINDVRSTFLEEMGWFDKVATGPVFISAR DGNGLTDKSISKIFGRAFAAAGAPRRAGIKSFRSKFANDAIAAETLARLELGLDTSAPSVAAAVSVDLGHSHPESIRAYV EQHQSRLASRKRNP
Sequences:
>Translated_414_residues MIERNASEFGGGRLSWKRFGAKRYVVAYDPVTMGIVWPLVDYAIFLTDRIGSDPKTVESAILGVAAYRYFLVVVSKDDNR RTEKKLGSLGFEESTDTLLRSFRDQEVERVCRRINSNHDKMTAQRTVNAKLIHIYHFLNWYRCTHNLEYFLGPSQCSIAS TLGDSDVNSRRRGRYESRTYERYPLLFRRVHENPRTVRAYVATEKDKAYIRDYFRANFTYFVAVRNLLIMEIADRVGWRR ESINSLACEQFSPGRLEAMDARGLACVPDRQKFGYRDAFYIPPSLAIEIASFINDVRSTFLEEMGWFDKVATGPVFISAR DGNGLTDKSISKIFGRAFAAAGAPRRAGIKSFRSKFANDAIAAETLARLELGLDTSAPSVAAAVSVDLGHSHPESIRAYV EQHQSRLASRKRNP >Mature_414_residues MIERNASEFGGGRLSWKRFGAKRYVVAYDPVTMGIVWPLVDYAIFLTDRIGSDPKTVESAILGVAAYRYFLVVVSKDDNR RTEKKLGSLGFEESTDTLLRSFRDQEVERVCRRINSNHDKMTAQRTVNAKLIHIYHFLNWYRCTHNLEYFLGPSQCSIAS TLGDSDVNSRRRGRYESRTYERYPLLFRRVHENPRTVRAYVATEKDKAYIRDYFRANFTYFVAVRNLLIMEIADRVGWRR ESINSLACEQFSPGRLEAMDARGLACVPDRQKFGYRDAFYIPPSLAIEIASFINDVRSTFLEEMGWFDKVATGPVFISAR DGNGLTDKSISKIFGRAFAAAGAPRRAGIKSFRSKFANDAIAAETLARLELGLDTSAPSVAAAVSVDLGHSHPESIRAYV EQHQSRLASRKRNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47055; Mature: 47055
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIERNASEFGGGRLSWKRFGAKRYVVAYDPVTMGIVWPLVDYAIFLTDRIGSDPKTVESA CCCCCCCCCCCCCCCHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ILGVAAYRYFLVVVSKDDNRRTEKKLGSLGFEESTDTLLRSFRDQEVERVCRRINSNHDK HHHHHHHHHEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH MTAQRTVNAKLIHIYHFLNWYRCTHNLEYFLGPSQCSIASTLGDSDVNSRRRGRYESRTY HHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCCCCHHHCCCCCCCHH ERYPLLFRRVHENPRTVRAYVATEKDKAYIRDYFRANFTYFVAVRNLLIMEIADRVGWRR HHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHH ESINSLACEQFSPGRLEAMDARGLACVPDRQKFGYRDAFYIPPSLAIEIASFINDVRSTF HHHHHHHHCCCCCCCEEEECCCCCEECCCHHHCCCCCEEECCHHHHHHHHHHHHHHHHHH LEEMGWFDKVATGPVFISARDGNGLTDKSISKIFGRAFAAAGAPRRAGIKSFRSKFANDA HHHHCCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCH IAAETLARLELGLDTSAPSVAAAVSVDLGHSHPESIRAYVEQHQSRLASRKRNP HHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIERNASEFGGGRLSWKRFGAKRYVVAYDPVTMGIVWPLVDYAIFLTDRIGSDPKTVESA CCCCCCCCCCCCCCCHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ILGVAAYRYFLVVVSKDDNRRTEKKLGSLGFEESTDTLLRSFRDQEVERVCRRINSNHDK HHHHHHHHHEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH MTAQRTVNAKLIHIYHFLNWYRCTHNLEYFLGPSQCSIASTLGDSDVNSRRRGRYESRTY HHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCCCCHHHCCCCCCCHH ERYPLLFRRVHENPRTVRAYVATEKDKAYIRDYFRANFTYFVAVRNLLIMEIADRVGWRR HHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHH ESINSLACEQFSPGRLEAMDARGLACVPDRQKFGYRDAFYIPPSLAIEIASFINDVRSTF HHHHHHHHCCCCCCCEEEECCCCCEECCCHHHCCCCCEEECCHHHHHHHHHHHHHHHHHH LEEMGWFDKVATGPVFISARDGNGLTDKSISKIFGRAFAAAGAPRRAGIKSFRSKFANDA HHHHCCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCH IAAETLARLELGLDTSAPSVAAAVSVDLGHSHPESIRAYVEQHQSRLASRKRNP HHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA