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The map label for this gene is omp32 [H]

Identifier: 186474923

GI number: 186474923

Start: 172525

End: 173628

Strand: Direct

Name: omp32 [H]

Synonym: Bphy_0154

Alternate gene names: 186474923

Gene position: 172525-173628 (Clockwise)

Preceding gene: 186474922

Following gene: 186474924

Centisome position: 4.96

GC content: 60.42

Gene sequence:

>1104_bases
ATGAATACCACCGTCAGCCGCGCGCTGAGAACAGGCCGTGAGGCGAGCCCGAAGGCAACTTTCAAGGCGACCGTCATCGG
CGCCTTGCTGGCCATTGCGTCGACCTCGTCGTTCGCGCAATCGAGCGTGCAGCTTTATGGTCAGGTCGACGAATGGGTCG
GCGTAACGAAGTTCCCGGGCAGCCAGGCTGCCTGGAACGTGTCCGGTGGCGGTATGTCGACCTCGTATTGGGGCATCAAG
GGTGCGGAAGATCTGGGCAACGGCTACAAGGCGATCTTTACCCTCGAAGACTTCTTCCGCGCGCAGAACGGTAAATACGG
CCGCTTCGACGGCGACACGTTCTTCGGCCGTAACGCGTACGTCGGTATCGAATCGCCCTACGGCACCGTGACGGCGGGCC
GTCTCACCACGCAACTGTTCGTGTCGACGATTCTCTTTAATCCGTTCATCGACTCGTACGTGTTCTCGCCGATGGTCTAT
CACGTGTTCCTCGGTCTGGGCACGTTCCCGACCTACACGACGGACATGGGCGTGGTCGGCGATTCGGGCTGGAATAACGC
AATCCAGTATTCGACGCCCGACTTCAGCGGCCTGTCGGGCAGCGCGATGTATGCACTCGGCAATTCCGCCGATCACAACG
GCTCAAAGAAATACAGCGCGCAGTTCCTGTATTTCCACGGCCCGTTCGCGGCGACGGGCGTCTTCCAGTACGTGAACTTC
AACAACTCGCCGACGGATCTCGGTTCGCTGGTCGCCGGGCTGAAGAGCCAGTCGGTGGGTCAGGTGGGCGTGTCGTACGA
CCTCAAGTACGTGAAGTTCTATGGCCAGTACATGTACACGAAGAACGATCAGGACGTCTCCAGCTGGCACGTGAACACGG
CGCAGGGTGGTGTGTCCGTGCCGCTCGGCACGGGCACCGTGATGGCGTCGTACGCCTATTCGCGCGACTCGGGCGGTCTG
GATCAGATGCATCAGTCGGCGGCCATTGGTTATGACTATCCGCTGTCCAAGCGTACCGATGTGTATGCCGCCTACCTGTA
CGACAAGTACACGAGCCTCGCATCGGGTTATACGGCCGGTGTCGGCCTGCGCGCGAAGTTCTGA

Upstream 100 bases:

>100_bases
ATTTGTCCCAGCCCCGATTGGCGGTCAGACGGATAACAAGCAGGATCCGGCGAGCGCCCCGCCGCACAGCCACACCCTTT
TGACAAAGACAGGAGAACCC

Downstream 100 bases:

>100_bases
TTGCGGCGTCAGCCCAGCGGCGTCCGCGCGCCGCCTGTCAAAGCCCTGGTTCCTCGCGGAACGCAGGGCTTGTTCTTTCG
GCTGCACCTACTGCCTCACA

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MNTTVSRALRTGREASPKATFKATVIGALLAIASTSSFAQSSVQLYGQVDEWVGVTKFPGSQAAWNVSGGGMSTSYWGIK
GAEDLGNGYKAIFTLEDFFRAQNGKYGRFDGDTFFGRNAYVGIESPYGTVTAGRLTTQLFVSTILFNPFIDSYVFSPMVY
HVFLGLGTFPTYTTDMGVVGDSGWNNAIQYSTPDFSGLSGSAMYALGNSADHNGSKKYSAQFLYFHGPFAATGVFQYVNF
NNSPTDLGSLVAGLKSQSVGQVGVSYDLKYVKFYGQYMYTKNDQDVSSWHVNTAQGGVSVPLGTGTVMASYAYSRDSGGL
DQMHQSAAIGYDYPLSKRTDVYAAYLYDKYTSLASGYTAGVGLRAKF

Sequences:

>Translated_367_residues
MNTTVSRALRTGREASPKATFKATVIGALLAIASTSSFAQSSVQLYGQVDEWVGVTKFPGSQAAWNVSGGGMSTSYWGIK
GAEDLGNGYKAIFTLEDFFRAQNGKYGRFDGDTFFGRNAYVGIESPYGTVTAGRLTTQLFVSTILFNPFIDSYVFSPMVY
HVFLGLGTFPTYTTDMGVVGDSGWNNAIQYSTPDFSGLSGSAMYALGNSADHNGSKKYSAQFLYFHGPFAATGVFQYVNF
NNSPTDLGSLVAGLKSQSVGQVGVSYDLKYVKFYGQYMYTKNDQDVSSWHVNTAQGGVSVPLGTGTVMASYAYSRDSGGL
DQMHQSAAIGYDYPLSKRTDVYAAYLYDKYTSLASGYTAGVGLRAKF
>Mature_367_residues
MNTTVSRALRTGREASPKATFKATVIGALLAIASTSSFAQSSVQLYGQVDEWVGVTKFPGSQAAWNVSGGGMSTSYWGIK
GAEDLGNGYKAIFTLEDFFRAQNGKYGRFDGDTFFGRNAYVGIESPYGTVTAGRLTTQLFVSTILFNPFIDSYVFSPMVY
HVFLGLGTFPTYTTDMGVVGDSGWNNAIQYSTPDFSGLSGSAMYALGNSADHNGSKKYSAQFLYFHGPFAATGVFQYVNF
NNSPTDLGSLVAGLKSQSVGQVGVSYDLKYVKFYGQYMYTKNDQDVSSWHVNTAQGGVSVPLGTGTVMASYAYSRDSGGL
DQMHQSAAIGYDYPLSKRTDVYAAYLYDKYTSLASGYTAGVGLRAKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39548; Mature: 39548

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTVSRALRTGREASPKATFKATVIGALLAIASTSSFAQSSVQLYGQVDEWVGVTKFPG
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCEECCC
SQAAWNVSGGGMSTSYWGIKGAEDLGNGYKAIFTLEDFFRAQNGKYGRFDGDTFFGRNAY
CCCEEEECCCCCCCCCCCCCCHHHHCCCEEEEEEEHHHHHHCCCCCCCCCCCEEECCCEE
VGIESPYGTVTAGRLTTQLFVSTILFNPFIDSYVFSPMVYHVFLGLGTFPTYTTDMGVVG
EEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DSGWNNAIQYSTPDFSGLSGSAMYALGNSADHNGSKKYSAQFLYFHGPFAATGVFQYVNF
CCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCHHHCCEEEEECC
NNSPTDLGSLVAGLKSQSVGQVGVSYDLKYVKFYGQYMYTKNDQDVSSWHVNTAQGGVSV
CCCCHHHHHHHHHHHCCCCCCCCCEECCEEEEEEEEEEEECCCCCCHHEEEECCCCCEEE
PLGTGTVMASYAYSRDSGGLDQMHQSAAIGYDYPLSKRTDVYAAYLYDKYTSLASGYTAG
ECCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCC
VGLRAKF
CEEEECC
>Mature Secondary Structure
MNTTVSRALRTGREASPKATFKATVIGALLAIASTSSFAQSSVQLYGQVDEWVGVTKFPG
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCEECCC
SQAAWNVSGGGMSTSYWGIKGAEDLGNGYKAIFTLEDFFRAQNGKYGRFDGDTFFGRNAY
CCCEEEECCCCCCCCCCCCCCHHHHCCCEEEEEEEHHHHHHCCCCCCCCCCCEEECCCEE
VGIESPYGTVTAGRLTTQLFVSTILFNPFIDSYVFSPMVYHVFLGLGTFPTYTTDMGVVG
EEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DSGWNNAIQYSTPDFSGLSGSAMYALGNSADHNGSKKYSAQFLYFHGPFAATGVFQYVNF
CCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCHHHCCEEEEECC
NNSPTDLGSLVAGLKSQSVGQVGVSYDLKYVKFYGQYMYTKNDQDVSSWHVNTAQGGVSV
CCCCHHHHHHHHHHHCCCCCCCCCEECCEEEEEEEEEEEECCCCCCHHEEEECCCCCEEE
PLGTGTVMASYAYSRDSGGLDQMHQSAAIGYDYPLSKRTDVYAAYLYDKYTSLASGYTAG
ECCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCC
VGLRAKF
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]