| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is cutC [H]
Identifier: 186474911
GI number: 186474911
Start: 156536
End: 157225
Strand: Direct
Name: cutC [H]
Synonym: Bphy_0141
Alternate gene names: 186474911
Gene position: 156536-157225 (Clockwise)
Preceding gene: 186474910
Following gene: 186474913
Centisome position: 4.5
GC content: 61.59
Gene sequence:
>690_bases ATGCGAAACGAACGGGTATTGCTCGAAGTCATCGCGACGACGGTTGCCGATGCGAAGGCTGCCGCGCGTGGCGGCGCGGA TCGGCTTGAACTGATCACCGCGATGGGCGAGGGCGGGTTGACGCCGAGCATCGGCATGATCGAGGCCGTCGCGGCGGCCG TGCCGATTCCCGTGAACGTGATCGTGCGGCCGCATAGCCACTCTTTTGTCTACGATGCCGATGACTTTGCTGTGATTCTG CGGGACGTGCGTGCGGCCAGGGCGGCGGGTGCCAATGCGGTGGTGTTTGGGATGTTGACTGCGTCGCGCGAAGTTGATCG TGAGGCGTTGTTACGCGTTGTCGATGCTGCTGACGGGATGCCTGTCACGTTTCATCGTGCGTTCGATGAAACGCGCGATT TGCGCGAGGCTTTGGATATTCTTCTCGAGGTCGACGGGGTTGCGAATGTCTTGACCTCCGGTGGGAGGTCTTCTGTGCTC GATGCCGTTGGTGAGGTTCAATTGCTTGTTGCGCAAGCGGCGGGATCTGCCTGTACGGTGCTGGCGGGCGCCGGGCTGAC GGTTGATCGTGTCGCCGGGTTTGTCCACGCTGCGCACGTGAAGGCGGTTCATTTCGGATCGGGTGTGCGCAGCGATGGTG TTGTTGCTGAGGAGAAGGTCAGGTTGGTGCGCGGGCTTCTGGATGCATGA
Upstream 100 bases:
>100_bases GTCGCATGTGCGTGCTGTGCGGCGATATCGACTGGTTCGAGGAGCCGCACTTCTGACATCATGTCTGTCTTGTTCTTCTT GACGACGTGACTTCCTTGAC
Downstream 100 bases:
>100_bases GCCCGTATTCGACCACGGCGATCAGGATGTCCTGGCAACCGCGCGTCCTGAGTTCGTTGAACACCTTGAGTCAGAACTTC GCCGTCGGTCTGGATGCCCA
Product: CutC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MRNERVLLEVIATTVADAKAAARGGADRLELITAMGEGGLTPSIGMIEAVAAAVPIPVNVIVRPHSHSFVYDADDFAVIL RDVRAARAAGANAVVFGMLTASREVDREALLRVVDAADGMPVTFHRAFDETRDLREALDILLEVDGVANVLTSGGRSSVL DAVGEVQLLVAQAAGSACTVLAGAGLTVDRVAGFVHAAHVKAVHFGSGVRSDGVVAEEKVRLVRGLLDA
Sequences:
>Translated_229_residues MRNERVLLEVIATTVADAKAAARGGADRLELITAMGEGGLTPSIGMIEAVAAAVPIPVNVIVRPHSHSFVYDADDFAVIL RDVRAARAAGANAVVFGMLTASREVDREALLRVVDAADGMPVTFHRAFDETRDLREALDILLEVDGVANVLTSGGRSSVL DAVGEVQLLVAQAAGSACTVLAGAGLTVDRVAGFVHAAHVKAVHFGSGVRSDGVVAEEKVRLVRGLLDA >Mature_229_residues MRNERVLLEVIATTVADAKAAARGGADRLELITAMGEGGLTPSIGMIEAVAAAVPIPVNVIVRPHSHSFVYDADDFAVIL RDVRAARAAGANAVVFGMLTASREVDREALLRVVDAADGMPVTFHRAFDETRDLREALDILLEVDGVANVLTSGGRSSVL DAVGEVQLLVAQAAGSACTVLAGAGLTVDRVAGFVHAAHVKAVHFGSGVRSDGVVAEEKVRLVRGLLDA
Specific function: Involved in copper homeostasis [H]
COG id: COG3142
COG function: function code P; Uncharacterized protein involved in copper resistance
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutC family [H]
Homologues:
Organism=Homo sapiens, GI148596990, Length=181, Percent_Identity=41.4364640883978, Blast_Score=135, Evalue=3e-32, Organism=Escherichia coli, GI87081995, Length=202, Percent_Identity=39.1089108910891, Blast_Score=125, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17556905, Length=208, Percent_Identity=35.0961538461538, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI21355415, Length=207, Percent_Identity=35.2657004830918, Blast_Score=124, Evalue=6e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005627 [H]
Pfam domain/function: PF03932 CutC [H]
EC number: NA
Molecular weight: Translated: 23767; Mature: 23767
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNERVLLEVIATTVADAKAAARGGADRLELITAMGEGGLTPSIGMIEAVAAAVPIPVNV CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEE IVRPHSHSFVYDADDFAVILRDVRAARAAGANAVVFGMLTASREVDREALLRVVDAADGM EEECCCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHCCHHHHHHHHHCCCCC PVTFHRAFDETRDLREALDILLEVDGVANVLTSGGRSSVLDAVGEVQLLVAQAAGSACTV CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEE LAGAGLTVDRVAGFVHAAHVKAVHFGSGVRSDGVVAEEKVRLVRGLLDA EECCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRNERVLLEVIATTVADAKAAARGGADRLELITAMGEGGLTPSIGMIEAVAAAVPIPVNV CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEE IVRPHSHSFVYDADDFAVILRDVRAARAAGANAVVFGMLTASREVDREALLRVVDAADGM EEECCCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHCCHHHHHHHHHCCCCC PVTFHRAFDETRDLREALDILLEVDGVANVLTSGGRSSVLDAVGEVQLLVAQAAGSACTV CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEE LAGAGLTVDRVAGFVHAAHVKAVHFGSGVRSDGVVAEEKVRLVRGLLDA EECCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA