| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186474906
Identifier: 186474906
GI number: 186474906
Start: 149102
End: 149725
Strand: Direct
Name: 186474906
Synonym: Bphy_0136
Alternate gene names: NA
Gene position: 149102-149725 (Clockwise)
Preceding gene: 186474905
Following gene: 186474907
Centisome position: 4.29
GC content: 68.27
Gene sequence:
>624_bases ATGACTGAATCCATCACCTGCACCGCGTTCGAAGGCGCTCGATGCATCGCGTCAGGCGAGCTGAAGGACGTCGCGCTGGC CGTCAAAGCCGCCACCGGGCGCGACGGCGGCGCGTCCGTTCTGATCTTCGACGATCGGACCGGCCAACTCGTCGAACTGG ACTTGCGAGGCTCCGCGAGCGAGGTGCTGGCGAGGCTTGCAGCGCAGGAAACCGGTGACACCCAGCCGCCCGAGCCCGCA AGCGACGCAGCTTCCGCAACGCGCGGTCGCGGCCGTCCGAAGCTAGGCGTAGTCGCGCGCGAGGTCACTTTGTTGCCGAG GCACTGGGAATGGCTGAACGCGCAATCGGGTGGGGCGTCGGTGGCGCTGCGCAAGCTGGTCGACGCCGCGCGTGTCGCAA GCGAAGGCAAGGACCGTGTGCGACGGGCGCAGGAAGCGGCGTATCGCTTCATGACGACGATGGCGGGCGACCTGGCGGGC TACGAAGAAGCGACACGCGCGCTGTATGCGAACGACGCGGCGCGCTTCGATTCGATGACAGCGGCCTGGCCCGTGGACGT GCGCGAGCATGCCCGCAAACTGGCCAGGCGCTCGCTCGATGCGGACCCCGTGGCGATCGTCTGA
Upstream 100 bases:
>100_bases AGGTGACGCCACATTTCCTATTTCATCCGGGTAGAATTGCCGTTTTAATTTATATCCGGGTAAAATTAGCGCATCGACTT TAGACGATGCGAGGCATCAC
Downstream 100 bases:
>100_bases CCGTTACCACAGAATCAACAGGCGAAAAAAATCCGCTCACGCCGGGGAGCATGAGCGGAAAGTCGGAGAGTTACAACATC GCTTGCGCTACTCAATCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTESITCTAFEGARCIASGELKDVALAVKAATGRDGGASVLIFDDRTGQLVELDLRGSASEVLARLAAQETGDTQPPEPA SDAASATRGRGRPKLGVVAREVTLLPRHWEWLNAQSGGASVALRKLVDAARVASEGKDRVRRAQEAAYRFMTTMAGDLAG YEEATRALYANDAARFDSMTAAWPVDVREHARKLARRSLDADPVAIV
Sequences:
>Translated_207_residues MTESITCTAFEGARCIASGELKDVALAVKAATGRDGGASVLIFDDRTGQLVELDLRGSASEVLARLAAQETGDTQPPEPA SDAASATRGRGRPKLGVVAREVTLLPRHWEWLNAQSGGASVALRKLVDAARVASEGKDRVRRAQEAAYRFMTTMAGDLAG YEEATRALYANDAARFDSMTAAWPVDVREHARKLARRSLDADPVAIV >Mature_206_residues TESITCTAFEGARCIASGELKDVALAVKAATGRDGGASVLIFDDRTGQLVELDLRGSASEVLARLAAQETGDTQPPEPAS DAASATRGRGRPKLGVVAREVTLLPRHWEWLNAQSGGASVALRKLVDAARVASEGKDRVRRAQEAAYRFMTTMAGDLAGY EEATRALYANDAARFDSMTAAWPVDVREHARKLARRSLDADPVAIV
Specific function: Unknown
COG id: COG3644
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22068; Mature: 21937
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESITCTAFEGARCIASGELKDVALAVKAATGRDGGASVLIFDDRTGQLVELDLRGSAS CCCCEEEEEECCCEEEECCCHHHHEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCHH EVLARLAAQETGDTQPPEPASDAASATRGRGRPKLGVVAREVTLLPRHWEWLNAQSGGAS HHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHEECCCCHHHCCCCCCCHH VALRKLVDAARVASEGKDRVRRAQEAAYRFMTTMAGDLAGYEEATRALYANDAARFDSMT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHCCCC AAWPVDVREHARKLARRSLDADPVAIV CCCCCCHHHHHHHHHHHCCCCCCEEEC >Mature Secondary Structure TESITCTAFEGARCIASGELKDVALAVKAATGRDGGASVLIFDDRTGQLVELDLRGSAS CCCEEEEEECCCEEEECCCHHHHEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCHH EVLARLAAQETGDTQPPEPASDAASATRGRGRPKLGVVAREVTLLPRHWEWLNAQSGGAS HHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHEECCCCHHHCCCCCCCHH VALRKLVDAARVASEGKDRVRRAQEAAYRFMTTMAGDLAGYEEATRALYANDAARFDSMT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHCCCC AAWPVDVREHARKLARRSLDADPVAIV CCCCCCHHHHHHHHHHHCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA