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The map label for this gene is yraN [C]

Identifier: 186474893

GI number: 186474893

Start: 132181

End: 132651

Strand: Direct

Name: yraN [C]

Synonym: Bphy_0123

Alternate gene names: 186474893

Gene position: 132181-132651 (Clockwise)

Preceding gene: 186474891

Following gene: 186474894

Centisome position: 3.8

GC content: 63.27

Gene sequence:

>471_bases
ATGACACGAAAAACGCAGACAGATGAAACAAGGCAGACATTGTGCCACGCAGCCGCACCGTTACCCGCCTCTGCGCGTGA
AGCCACGCGACCCGCTGACAACTTTTCGGGAGGCGCACGGTCCAAAATCGTCGGGGCGGCGTTCGAGGCGCGGGCGCTGA
CGTTTCTTCAGCGGCAGCGTTTGCGCTTCGTCGCGCGTAACGTCGTGTGCCGAGGCGGCGAGATCGACCTCGTGATGCGC
GAGCGGGATGGTTCGCTCGTGTTCGTCGAAGTGCGTGCGCGGGCGCAAAGCGAATATGGCGGAGCGGCGGCGAGTGTCGG
TTGGCGGAAGCAGCAGCGCATCGTGCGCGCCGCGCAGCATTTTTTGTCGACGCATGATGTTGCGATGCCCGCGTGCCGTT
TCGATGTGATCGCGTTCGAGCGAGGACGTCTGGTGTGGGTGCGGGACGCTTTTCGCGTGGATGAAGGTTGA

Upstream 100 bases:

>100_bases
GCGCACCGTGATGTCGGCGATGTTGCCGATCGGCGTAGCTACGACGTACAGCGCAGAAGTGGGGTACTGCTGCCCTTGCG
CGAGTTCGGAAAGAGGAGTC

Downstream 100 bases:

>100_bases
GACGCAGATTCGCCGCGTGAGTACGCTAAACTTGCGGACGCGAAAAGGGCTGGGCGCTTTTACTCGCTCGATGCGGGCAA
GTGGCCGCCGTCAAGCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTRKTQTDETRQTLCHAAAPLPASAREATRPADNFSGGARSKIVGAAFEARALTFLQRQRLRFVARNVVCRGGEIDLVMR
ERDGSLVFVEVRARAQSEYGGAAASVGWRKQQRIVRAAQHFLSTHDVAMPACRFDVIAFERGRLVWVRDAFRVDEG

Sequences:

>Translated_156_residues
MTRKTQTDETRQTLCHAAAPLPASAREATRPADNFSGGARSKIVGAAFEARALTFLQRQRLRFVARNVVCRGGEIDLVMR
ERDGSLVFVEVRARAQSEYGGAAASVGWRKQQRIVRAAQHFLSTHDVAMPACRFDVIAFERGRLVWVRDAFRVDEG
>Mature_155_residues
TRKTQTDETRQTLCHAAAPLPASAREATRPADNFSGGARSKIVGAAFEARALTFLQRQRLRFVARNVVCRGGEIDLVMRE
RDGSLVFVEVRARAQSEYGGAAASVGWRKQQRIVRAAQHFLSTHDVAMPACRFDVIAFERGRLVWVRDAFRVDEG

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=113, Percent_Identity=46.9026548672566, Blast_Score=96, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 17404; Mature: 17273

Theoretical pI: Translated: 11.39; Mature: 11.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKTQTDETRQTLCHAAAPLPASAREATRPADNFSGGARSKIVGAAFEARALTFLQRQR
CCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LRFVARNVVCRGGEIDLVMRERDGSLVFVEVRARAQSEYGGAAASVGWRKQQRIVRAAQH
HHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECHHCCCCCCCHHHCCHHHHHHHHHHHHH
FLSTHDVAMPACRFDVIAFERGRLVWVRDAFRVDEG
HHHHCCCCCCHHHEEEEEECCCCEEEEECCEECCCC
>Mature Secondary Structure 
TRKTQTDETRQTLCHAAAPLPASAREATRPADNFSGGARSKIVGAAFEARALTFLQRQR
CCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LRFVARNVVCRGGEIDLVMRERDGSLVFVEVRARAQSEYGGAAASVGWRKQQRIVRAAQH
HHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECHHCCCCCCCHHHCCHHHHHHHHHHHHH
FLSTHDVAMPACRFDVIAFERGRLVWVRDAFRVDEG
HHHHCCCCCCHHHEEEEEECCCCEEEEECCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA