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The map label for this gene is rdoA [H]

Identifier: 186474858

GI number: 186474858

Start: 95889

End: 96911

Strand: Direct

Name: rdoA [H]

Synonym: Bphy_0087

Alternate gene names: 186474858

Gene position: 95889-96911 (Clockwise)

Preceding gene: 186474857

Following gene: 186474859

Centisome position: 2.76

GC content: 64.13

Gene sequence:

>1023_bases
ATGAACGAAGACACTCCAATTTCGCAGGACGGCCACGCTGTTCCGTTTGCCCGGCTCGCGCCGGAGGTGGTGCTCGACGC
GCTCGACAGCGTACTCGACACCGTGGGCGTGCGCACCGACGGGCGCATGCTGCCGCTCAACAGCTACGAGAACCGCGTCT
ATCAGGTCGGCGTCGAAGACGGCCCGCCCGTCGTCGCGAAGTTCTACCGGCCCGAACGCTGGACCGACCAAGCGATTCTC
GAAGAGCACGCGTTTGTCGCGGAACTGGCCGCACGCGAGATTCCCGCCGTGCCCGCTCGCACCTTCAACGGCGCCACGCT
GCATACCTTCGACGGCTTTCGCTTTTCCGTCTTCGAGCGGCGCGGCGGCCGCGCGCCGGATCTCGACCGCAAGGACACGC
TGGAATGGCTCGGCCGATTCATCGGGCGCATTCACGCCGTCGGTCAGACGGCGAACTATGCGGCGCGCCCGACGCTCGAG
ATTCACACCTTCGGTTACGAGCCGCGCGACTATCTGCTTGCGCAAGACTTCATTCCCGCCGACGTGCGTACCGCATGGGA
GGCCGCTGTGAATCTGGCGCTGGAAGGCGTCGAGCAGGCATTCGAACGGGCGGGCGATGTGCGTCAGATACGCATGCACG
GCGATTGCCATCCGAGTAACGTGCTGTGGACCGATGCAGGCCCGCATTTCGTCGATTTCGACGATAGCCGCATGGGCCCG
GCCATTCAGGATCTGTGGCTGTTGTTGCCGGGCGAGCGCCAGGAAGCGTCGCGCGCGCTGACGGATCTGCTTGCGGGCTA
TGAGGACTTCTGCGAGTTCGATCAGCGCGAACTGCATCTGATCGAAGCGTTACGCACCTTAAGGCTGATTCACTACTCGG
CGTGGCTCGCGCGCCGATGGGACGATCCGGCGTTTCCGGTTGCGTTTCCCTGGTTCAACACGCAGCGCTACTGGGAAGAC
CGTATTCTCGAGTTGCGCGAGCAGATCGGCGCAATGCAGGAAGGGCCGCTCTGGCCCGTGTAA

Upstream 100 bases:

>100_bases
GTATGGCGAGGTGTGCGGCCGCTGAACGCGCCGCGTCGCGAGTGATACGCCGGCGACACTTGCGCTCGTTTTTGTGCCCG
TCACGGCGCACAATGCGGGC

Downstream 100 bases:

>100_bases
AGTCCGGCGCAAGGCGTCGTCAGTCGGCGGCGCGAGTGCGGCGCTGCCGTCCGGCAATTGCGCGCACCGCGACCGCCGTT
GCCGCCGCTGAGCGTTGCGC

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MNEDTPISQDGHAVPFARLAPEVVLDALDSVLDTVGVRTDGRMLPLNSYENRVYQVGVEDGPPVVAKFYRPERWTDQAIL
EEHAFVAELAAREIPAVPARTFNGATLHTFDGFRFSVFERRGGRAPDLDRKDTLEWLGRFIGRIHAVGQTANYAARPTLE
IHTFGYEPRDYLLAQDFIPADVRTAWEAAVNLALEGVEQAFERAGDVRQIRMHGDCHPSNVLWTDAGPHFVDFDDSRMGP
AIQDLWLLLPGERQEASRALTDLLAGYEDFCEFDQRELHLIEALRTLRLIHYSAWLARRWDDPAFPVAFPWFNTQRYWED
RILELREQIGAMQEGPLWPV

Sequences:

>Translated_340_residues
MNEDTPISQDGHAVPFARLAPEVVLDALDSVLDTVGVRTDGRMLPLNSYENRVYQVGVEDGPPVVAKFYRPERWTDQAIL
EEHAFVAELAAREIPAVPARTFNGATLHTFDGFRFSVFERRGGRAPDLDRKDTLEWLGRFIGRIHAVGQTANYAARPTLE
IHTFGYEPRDYLLAQDFIPADVRTAWEAAVNLALEGVEQAFERAGDVRQIRMHGDCHPSNVLWTDAGPHFVDFDDSRMGP
AIQDLWLLLPGERQEASRALTDLLAGYEDFCEFDQRELHLIEALRTLRLIHYSAWLARRWDDPAFPVAFPWFNTQRYWED
RILELREQIGAMQEGPLWPV
>Mature_340_residues
MNEDTPISQDGHAVPFARLAPEVVLDALDSVLDTVGVRTDGRMLPLNSYENRVYQVGVEDGPPVVAKFYRPERWTDQAIL
EEHAFVAELAAREIPAVPARTFNGATLHTFDGFRFSVFERRGGRAPDLDRKDTLEWLGRFIGRIHAVGQTANYAARPTLE
IHTFGYEPRDYLLAQDFIPADVRTAWEAAVNLALEGVEQAFERAGDVRQIRMHGDCHPSNVLWTDAGPHFVDFDDSRMGP
AIQDLWLLLPGERQEASRALTDLLAGYEDFCEFDQRELHLIEALRTLRLIHYSAWLARRWDDPAFPVAFPWFNTQRYWED
RILELREQIGAMQEGPLWPV

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=328, Percent_Identity=43.5975609756098, Blast_Score=276, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 38855; Mature: 38855

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEDTPISQDGHAVPFARLAPEVVLDALDSVLDTVGVRTDGRMLPLNSYENRVYQVGVED
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEECCC
GPPVVAKFYRPERWTDQAILEEHAFVAELAAREIPAVPARTFNGATLHTFDGFRFSVFER
CCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEHHHH
RGGRAPDLDRKDTLEWLGRFIGRIHAVGQTANYAARPTLEIHTFGYEPRDYLLAQDFIPA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCH
DVRTAWEAAVNLALEGVEQAFERAGDVRQIRMHGDCHPSNVLWTDAGPHFVDFDDSRMGP
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCEECCCCCCCCH
AIQDLWLLLPGERQEASRALTDLLAGYEDFCEFDQRELHLIEALRTLRLIHYSAWLARRW
HHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC
DDPAFPVAFPWFNTQRYWEDRILELREQIGAMQEGPLWPV
CCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNEDTPISQDGHAVPFARLAPEVVLDALDSVLDTVGVRTDGRMLPLNSYENRVYQVGVED
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEECCC
GPPVVAKFYRPERWTDQAILEEHAFVAELAAREIPAVPARTFNGATLHTFDGFRFSVFER
CCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEHHHH
RGGRAPDLDRKDTLEWLGRFIGRIHAVGQTANYAARPTLEIHTFGYEPRDYLLAQDFIPA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCH
DVRTAWEAAVNLALEGVEQAFERAGDVRQIRMHGDCHPSNVLWTDAGPHFVDFDDSRMGP
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCEECCCCCCCCH
AIQDLWLLLPGERQEASRALTDLLAGYEDFCEFDQRELHLIEALRTLRLIHYSAWLARRW
HHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC
DDPAFPVAFPWFNTQRYWEDRILELREQIGAMQEGPLWPV
CCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]