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The map label for this gene is ybeQ [H]

Identifier: 186474818

GI number: 186474818

Start: 54106

End: 54816

Strand: Direct

Name: ybeQ [H]

Synonym: Bphy_0047

Alternate gene names: 186474818

Gene position: 54106-54816 (Clockwise)

Preceding gene: 186474817

Following gene: 186474824

Centisome position: 1.56

GC content: 62.87

Gene sequence:

>711_bases
ATGAAGCAGTTGTCGTTGTACGCGATGCGCATGGTAACGCGCGCTATCGTGCTGACCGCATTGACGGCCGGCGCGGTGAC
GAATGCGCAGAGCAAGACGCCGCCCGCGCCGGATTCGGAAACGCAGACGGCCGTCGCTGACTACAATGCGGGCAACTATA
CGTCCGCGCTCGCCGAGTTTCGCAAGGCCGCGCAACGCGGCAACCGACTGGCAGAGTTCAACTACGCGATGATGCTGCTC
AACGGCGAAGGCGGTCCGGCGAATGTCGAAGAAGGCAAGAAGTGGCTGCGCAAGGCCGCCGACGCGAACATGTCGCACGC
GCAGTACGTCTACGGCAAGATGTACGACGATGGCGAGTTCGTTGCGCGCGATCCCGTCGAGGCGCATCAATGGTTTCTGA
AGGCTGCGCAGCAAGGCCACATCCAGGCTGAACTAGCGCTTGCGAACCAGTTTCTCGACGGACGCGGCACCGCTCGCGAC
AACCAGCAGGCATTCGTCTGGTACAAGAAAGCGGCCGAGGGCGGCGACATGACGGCTCAGTACGTGACGGGCTCGTTCTA
CGAACGCGGCGGTGATGGCGTGGCGCAGAATCTGAACGTCGCACGTGCCTATTACGCGGCGGCTGCCGCGCAGGGCGATC
CCGCCGCACGGCTCAAGTATCAGCAGCTCAGTACGCAGCTGCGCGAATCGCACGAAGCAAAGCCGCAATGA

Upstream 100 bases:

>100_bases
CCCGGCAATACCGGTCGGAGGGCTTCCGCTTCATCGCGCTGGCCGCCGATGTGATGTGGCTGTTGCGCACCACGCGACAG
GCACTGCAGGAGGTTCGCTC

Downstream 100 bases:

>100_bases
AAAACGGCGCCTGAACTTTCAGGCGCCATTTTGTTTTGCTTCTCGCTGCAACGCAGGATCAACTCTGCATCAGACGCTTC
TGTCGCGCGACGCTCATGAT

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKQLSLYAMRMVTRAIVLTALTAGAVTNAQSKTPPAPDSETQTAVADYNAGNYTSALAEFRKAAQRGNRLAEFNYAMMLL
NGEGGPANVEEGKKWLRKAADANMSHAQYVYGKMYDDGEFVARDPVEAHQWFLKAAQQGHIQAELALANQFLDGRGTARD
NQQAFVWYKKAAEGGDMTAQYVTGSFYERGGDGVAQNLNVARAYYAAAAAQGDPAARLKYQQLSTQLRESHEAKPQ

Sequences:

>Translated_236_residues
MKQLSLYAMRMVTRAIVLTALTAGAVTNAQSKTPPAPDSETQTAVADYNAGNYTSALAEFRKAAQRGNRLAEFNYAMMLL
NGEGGPANVEEGKKWLRKAADANMSHAQYVYGKMYDDGEFVARDPVEAHQWFLKAAQQGHIQAELALANQFLDGRGTARD
NQQAFVWYKKAAEGGDMTAQYVTGSFYERGGDGVAQNLNVARAYYAAAAAQGDPAARLKYQQLSTQLRESHEAKPQ
>Mature_236_residues
MKQLSLYAMRMVTRAIVLTALTAGAVTNAQSKTPPAPDSETQTAVADYNAGNYTSALAEFRKAAQRGNRLAEFNYAMMLL
NGEGGPANVEEGKKWLRKAADANMSHAQYVYGKMYDDGEFVARDPVEAHQWFLKAAQQGHIQAELALANQFLDGRGTARD
NQQAFVWYKKAAEGGDMTAQYVTGSFYERGGDGVAQNLNVARAYYAAAAAQGDPAARLKYQQLSTQLRESHEAKPQ

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=141, Percent_Identity=30.4964539007092, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI87081769, Length=163, Percent_Identity=36.8098159509202, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 25784; Mature: 25784

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLSLYAMRMVTRAIVLTALTAGAVTNAQSKTPPAPDSETQTAVADYNAGNYTSALAEF
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHH
RKAAQRGNRLAEFNYAMMLLNGEGGPANVEEGKKWLRKAADANMSHAQYVYGKMYDDGEF
HHHHHHCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHEECCCCCE
VARDPVEAHQWFLKAAQQGHIQAELALANQFLDGRGTARDNQQAFVWYKKAAEGGDMTAQ
EECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHH
YVTGSFYERGGDGVAQNLNVARAYYAAAAAQGDPAARLKYQQLSTQLRESHEAKPQ
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKQLSLYAMRMVTRAIVLTALTAGAVTNAQSKTPPAPDSETQTAVADYNAGNYTSALAEF
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHH
RKAAQRGNRLAEFNYAMMLLNGEGGPANVEEGKKWLRKAADANMSHAQYVYGKMYDDGEF
HHHHHHCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHEECCCCCE
VARDPVEAHQWFLKAAQQGHIQAELALANQFLDGRGTARDNQQAFVWYKKAAEGGDMTAQ
EECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHH
YVTGSFYERGGDGVAQNLNVARAYYAAAAAQGDPAARLKYQQLSTQLRESHEAKPQ
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]