Definition Mycobacterium marinum M, complete genome.
Accession NC_010612
Length 6,636,827

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The map label for this gene is rhlE

Identifier: 183981369

GI number:

Start: 1637065

End: 1638618

Strand: Reverse

Name: rhlE

Synonym: MMAR_1346

Alternate gene names: NA

Gene position: NA

Preceding gene: 183981371

Following gene: 183981368

Centisome position: NA

GC content: NA

Gene sequence:

>1554_bases
ATGACTGCGCTGAAAAGCACAACCGAAACAACCCCAAAAACATTTGCTGAACTTGGAGTTCGCGACGAAATAGTACGCGC
ACTGGGCGAACGGGACATCGAGTGTCCTTTCGCCATCCAAGAACTCACCCTGCCGCTGGCACTGGCCGGAGACGATCTGA
TCGGCCAGGCCCGCACGGGCATGGGCAAGACCTTCGCGTTCGGCGTGCCGCTGCTGCAGCGGGTCAGCTCCGGAACCGGC
GTGCGACCGCTGACCGGCGCCCCCCGCGCCTTGGTCGTGGTCCCCACTCGCGAGCTGTGCTTGCAGGTCACCGAGGACCT
GGCGGTGGCCGCCAAGTACCTCACCGCCACCACCGAGACCGGCGACCAGCGCCCGCTGTCGGTGGTCTCGATCTATGGCG
GACGCGCCTACGAGCCGCAGATCGAGGCCCTGCGGGCCGGCGCTGACGTCGTGGTCGGCACCCCCGGCCGGCTGCTCGAC
CTGAGCCAGCAGGGCCATCTACAGCTGGGCGGATTGTCCGTGCTGGTCCTCGACGAAGCGGACGAGATGCTCGACTTGGG
CTTCCTGCCCGATATCGAGCGCATCCTGCGCCAGATTCCCGCGGACCGGCAGTCGATGCTGTTCTCGGCGACCATGCCAG
ACCCGATCATCACGCTGGCGCGGACCTTCATGATCCAGCCCACCCACATCCGGGCCGAGGCGCCGCACTCGCTGGCGGTG
CACGACACCACCGAGCAGTTCGTCTACCGCGCCCACGCCCTGGACAAGGTCGAGCTGGTCACCCGGGTGCTGCAGGCTCG
GGAGCGGGGCGCGACGATGATCTTCACCCGCACCAAGCGCACCGCGCAGAAGGTTGCCGACGAGCTGAACGAGCGCGGTT
TCGCGGTGGGCGCCGTGCACGGTGACCTCGGACAGGTGGCCCGCGAGAAGGCCCTCAAGTCCTTCCGCAGCGGCAGCGTC
AACGTGCTGGTGGCCACCGATGTCGCCGCGCGCGGTATCGACATCGACGACGTCACCCACGTCATCAACTACCAGTGCCC
CGAGGACGAGAAGATGTACGTCCACCGCATCGGGCGCACCGGCCGGGCCGGCCGCACCGGCGTCGCCGTCACGCTGGTGG
ATTGGGATGAACTGCCCCGCTGGACGATGATCGACAAGGCATTGGGCCTGGGCTCACCCGACCCGGCCGAGACGTACTCC
AGCTCGCCGCATCTCTACACCGAGCTGTCCATCCCGACCGATGCCGCTGGCACCGTCGGCCCGCCGAGCAAGTCCGGGTC
CAAGCCCCGTACGACGGAAAAACAGGACGACCAGCAGGGCGAGAAGTCGGGGCGCGCGCGCTCGGACGCTGGGCGCCGGC
GGCGCACCCGCGGCGGCAAGCCGGTCACCGGACATCCCGCCACCACGCCGGTGGCCAGTGGCGAGACGGCCACCGAGACG
GGGTCGGGTTCCGGTGCGAGCTCTCCGTCCGGCAACGCCGGGGCCACCCGGCGCCGTCGCCGCCGCCGCAAGCCGGCCGG
CGTCCAAGACAACGCCGCCGCATCGGCTAACTGA

Upstream 100 bases:

>100_bases
CGACGTATCGGAGTCGGAAACTCGTGCGCGCGATGAACCGCGATTGAGATGACCGACCAATAAATACCGATACTGTCACC
GAAAGGCTCTTTACTCCCGT

Downstream 100 bases:

>100_bases
ACCTGCACCCACGCATGGTGAAGCCGGAACGGCGCACCAGGGGTGACATCCTGGCCGCCGCAGCGATCGTGGTGGTCATC
GCGCTCGTCACGTTGCTGAT

Product: ATP-dependent RNA helicase RhlE

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>517_residues
MTALKSTTETTPKTFAELGVRDEIVRALGERDIECPFAIQELTLPLALAGDDLIGQARTGMGKTFAFGVPLLQRVSSGTG
VRPLTGAPRALVVVPTRELCLQVTEDLAVAAKYLTATTETGDQRPLSVVSIYGGRAYEPQIEALRAGADVVVGTPGRLLD
LSQQGHLQLGGLSVLVLDEADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMIQPTHIRAEAPHSLAV
HDTTEQFVYRAHALDKVELVTRVLQARERGATMIFTRTKRTAQKVADELNERGFAVGAVHGDLGQVAREKALKSFRSGSV
NVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDELPRWTMIDKALGLGSPDPAETYS
SSPHLYTELSIPTDAAGTVGPPSKSGSKPRTTEKQDDQQGEKSGRARSDAGRRRRTRGGKPVTGHPATTPVASGETATET
GSGSGASSPSGNAGATRRRRRRRKPAGVQDNAAASAN

Sequences:
NA

Specific function: NA

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA