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The map label for this gene is rpoC

Identifier: 183981016

GI number:

Start: 1216589

End: 1220539

Strand: Direct

Name: rpoC

Synonym: MMAR_0996

Alternate gene names: NA

Gene position: NA

Preceding gene: 183981015

Following gene: 183981017

Centisome position: NA

GC content: NA

Gene sequence:

>3951_bases
GTGCTAGACGTCAACTTCTTCGATGAGCTCCGGATCGGCCTGGCTACCGCGGAGGACATCCGTCAGTGGTCCTACGGCGA
GGTCAAGAAGCCGGAGACCATCAACTACCGGACCTTGAAGCCCGAGAAGGACGGCCTGTTCTGCGAGAAGATCTTCGGAC
CGACTCGCGACTGGGAGTGCTACTGCGGCAAGTACAAGCGCGTTCGCTTCAAGGGCATCATCTGTGAGCGCTGTGGCGTC
GAGGTGACTCGGGCCAAGGTGCGTCGTGAGCGGATGGGCCACATCGAGTTGGCCGCGCCCGTCACCCACATCTGGTACTT
CAAGGGCGTCCCGTCGCGGTTGGGGTACCTGTTGGACCTGGCGCCGAAGGATCTCGAGAAGATCATCTACTTCGCCGCAT
ACGTGATCACCTCGGTCGACAACGAAATGCGCCACAACGAGCTGTCCACGCTCGAGGCCGAAATGATGGTGGAGCGCAAG
GCCGTCGAGGACCAGCGCGATGCCGATCTGGAAGCCCGTGCCCAGAAGCTGGAGGCCGACCTGGCCGAGCTCGAGGCCGA
GGGCGCGAAAGCCGACGCACGGCGCAAGGTCCGTGACAGCGGTGAGCGCGAGATGCGTCAGCTGCGCGACCGGGCCCAGC
GTGAGCTGGACCGGCTCGAGGACATCTGGAGCACCTTCACCAAGCTGGCCCCCAAGCAGCTGATCGTCGATGAGAACCTC
TACCGGGAACTGCAGGACCGCTACGGCGAGTACTTCACCGGTGCCATGGGCGCGGAGTCGATCCAGAAGCTGATCGAGAC
CTTCGACATCGACGCCGAAGCCGAGATCCTGCGGGACGTCATTCGCAATGGCAAGGGGCAGAAGAAGCTTCGTGCCCTCA
AGCGCCTGAAGGTGGTCGCCGCCTTCCAGCAGTCGGGCAACTCGCCGATGGGCATGGTGCTCGATGCGGTGCCGGTGATT
CCGCCGGAGCTGCGCCCGATGGTGCAGCTCGACGGTGGCCGCTTCGCCACCAGCGACCTCAACGACCTGTACCGCCGCGT
GATCAACCGCAACAACCGTCTCAAGAGGCTGATCGACCTCGGCGCACCCGAGATCATCGTCAACAACGAGAAGCGGATGC
TGCAGGAGTCGGTGGACGCGCTGTTCGACAACGGCCGTCGCGGCCGGCCGGTTACCGGTCCGGGTAACCGCCCGCTCAAG
TCGCTGTCCGATCTGCTCAAGGGCAAGCAGGGCCGGTTCCGCCAGAACCTGCTCGGTAAGCGTGTTGACTACTCGGGCCG
TTCGGTGATCGTGGTCGGTCCGCAGCTCAAGCTGCACCAGTGTGGTTTGCCCAAGCTGATGGCGCTGGAACTGTTCAAGC
CGTTCGTGATGAAGCGACTGGTCGACCTCAACCACGCGCAGAACATCAAGAGCGCAAAGCGGATGGTGGAGCGCCAGCGT
CCGCAGGTGTGGGACGTGCTCGAGGAAGTCATTGCAGAGCACCCGGTGCTGCTCAACCGCGCGCCCACCCTGCACCGCCT
CGGCATCCAGGCCTTCGAACCGATGCTGGTGGAAGGCAAGGCCATTCAGCTGCACCCGTTGGTGTGTGAGGCGTTCAACG
CCGACTTCGACGGTGACCAGATGGCCGTGCACCTGCCGCTGAGCGCCGAGGCTCAGGCCGAGGCCCGCATTCTGATGCTG
TCGAGTAACAACATCCTGTCGCCGGCCTCGGGTCGCCCGCTGGCCATGCCGCGACTGGACATGGTGACCGGGTTGTACTA
TCTGACCACCGAGGTCGAGGGTGACAAGGGTGCCTACCAGCCCGCTGGGCAGGACAGCCCGGAGACGGGTGTGTACTCGT
CACCGGCGGAAGCCATCATGGCGGCCGACCGGGGCGTGCTCTCGGTCCGCGCCAAGATCAAGGTGCGGCTGACGCAACTG
CGTCCCCCGGCCGAGATCGAGGACGCGCTGTTCGGCCACAACGGCTGGCAGCCGGGCGATGCGTGGACGGCCGAGACCAC
CTTGGGTCGTGTGTTGTTCAACGAGCTGCTGCCGCTGGGCTACGCCTTCGTGAACAAGCAGATGCACAAGAAGGTGCAGG
CCGCGATCATCAACGACCTGGCCGAGCGCTACCCGATGATCGTGGTCGCGCAGACCGTCGACAAGCTCAAGGACTCCGGT
TTCTACTGGGCGACCCGCAGTGGTGTCACGGTCTCGATGGCCGACGTGCTGGTGCCGCCGCGCAAGAAGGAGATCCTCGA
CTCCTACGAGGAGCGGGCGGAGAAGGTCGAGAAGCAGTTCCAGCGTGGTGCTCTGAACCATGACGAGCGCAACGAGGCAC
TGGTGGAGATCTGGAAGGAAGCCACCGACGAGGTCGGCCAGGCGCTGCGCGAGCACTACCCGGCCGACAACCCGATCATC
ACGATCGTCGACTCGGGCGCCACGGGTAACTTCACCCAGACTCGAACGCTGGCCGGCATGAAGGGTCTGGTGACCAACCC
CAAGGGTGAGTTCATCCCACGCCCGATCAAGTCCTCGTTCCGTGAGGGCCTGACCGTGTTGGAGTACTTCATCAACACCC
ACGGTGCCCGAAAGGGCTTGGCGGACACCGCACTGCGTACCGCCGACTCCGGCTACCTGACCCGTCGTCTGGTGGACGTC
AGCCAGGACGTGATCGTGCGCGAGCACGACTGCCAGACCGAGCGCGGCATCATGGTCGAGCTGGCCGAGCGTCAGGGCGA
CGGCACGCTGATCCGCGACCCGTACATCGAGACCTCGGCGTACGCGCGGACCCTGGGCGCCGACGCGGTCGATGAGGCCG
GCAATGTCGTTGTGGCGCGTGGTGAGGACTTGGGCGACCCGGAGATCGAGGCCTGCCTGGCGGCGGGTATCACCCAGGTC
AAGGTTCGCTCGGTGTTGACCTGCACCACGGGCACCGGTGTGTGCGCGACCTGCTACGGACGTTCGATGGCGACCGGCAA
GCTGGTCGACATCGGTGAGGCAGTCGGCATCGTCGCCGCCCAATCCATCGGTGAACCCGGCACGCAGCTGACGATGCGTA
CCTTCCACCAGGGTGGTGTGGGTGAGGACATCACCGGCGGTCTGCCGCGTGTCCAGGAGCTCTTCGAGGCTCGGGTGCCG
CGTGGTAAGGCGCCTATCGCCGATGTCACCGGTCGGGTCCGGCTCGAGGACGGTGAGCGCTTCTACAAGATCACCATCGT
CCCCGACGATGGCGGCGAGGAAGTCGTCTACGACAAGCTGTCCAAGCGGCAGCGGCTGCGGGTGTTCAAGCACGAGGACG
GCTCGGAGCGGGTGCTTTCCGACGGCGACCACGTCGAGGTGGGCCAGCAGCTGATGGAAGGCTCTGCCGACCCGCACGAG
GTGCTGCGTGTGCAGGGCCCGCGTGAGGTGCAGATCCACTTGGTCCGCGAGGTCCAGGAGGTCTACCGGGCCCAGGGTGT
GTCGATCCACGACAAGCACATCGAGGTGATCGTGCGCCAGATGCTGCGCCGGGTCACCATCATCGACTCGGGCGCGACGG
AGTTCCTGCCCGGCTCGCTGATCGACCGTGCGGAGTTCGAGGCGGAGAACCGCCGGGTGGTGGCCGAAAGCGGCGAGCCC
GCGGCCGGTCGTCCGGTGCTGATGGGTATCACCAAGGCATCGCTGGCCACCGACTCGTGGCTGTCGGCGGCGTCGTTCCA
GGAGACCACGCGAGTGCTGACCGATGCGGCGATCAACTGCCGCAGCGACAAGCTCAACGGTCTGAAGGAGAACGTGATCA
TCGGAAAGCTGATCCCGGCTGGTACCGGTATCAACCGCTACCGCAACATCGCGGTGCAGCCGACCGAAGAGGCCCGTGCC
GCGGCGTACACGATCCCGTCCTACGAGGACCAGTACTACAGCCCGGACTTCGGCCAGGCCACCGGTGCTGCGGTTCCGTT
GGACGACTACGGCTACAGCGACTACCGGTAG

Upstream 100 bases:

>100_bases
ATCAACCTGTCTCGCAACGAATCTGCGTCTGTCGAAGATCTCGCTTGATCTTTTGGAACCAGCTAGTAGTTACTAAACCC
GCAAGGGGAAAGGGAGTTAC

Downstream 100 bases:

>100_bases
CTAGACGTCAGGGAAGGCGACCCGAGGCCCTAGGCCTCGGGTCGCCTTGCTTATGTCGGTTGCCGAGGGCGGATGAGTAC
TCGCCTCGGTAACACCACCG

Product: DNA-directed RNA polymerase subunit beta'

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1316_residues
MLDVNFFDELRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWECYCGKYKRVRFKGIICERCGV
EVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPKDLEKIIYFAAYVITSVDNEMRHNELSTLEAEMMVERK
AVEDQRDADLEARAQKLEADLAELEAEGAKADARRKVRDSGEREMRQLRDRAQRELDRLEDIWSTFTKLAPKQLIVDENL
YRELQDRYGEYFTGAMGAESIQKLIETFDIDAEAEILRDVIRNGKGQKKLRALKRLKVVAAFQQSGNSPMGMVLDAVPVI
PPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDLGAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLK
SLSDLLKGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPMLVEGKAIQLHPLVCEAFNADFDGDQMAVHLPLSAEAQAEARILML
SSNNILSPASGRPLAMPRLDMVTGLYYLTTEVEGDKGAYQPAGQDSPETGVYSSPAEAIMAADRGVLSVRAKIKVRLTQL
RPPAEIEDALFGHNGWQPGDAWTAETTLGRVLFNELLPLGYAFVNKQMHKKVQAAIINDLAERYPMIVVAQTVDKLKDSG
FYWATRSGVTVSMADVLVPPRKKEILDSYEERAEKVEKQFQRGALNHDERNEALVEIWKEATDEVGQALREHYPADNPII
TIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSFREGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDV
SQDVIVREHDCQTERGIMVELAERQGDGTLIRDPYIETSAYARTLGADAVDEAGNVVVARGEDLGDPEIEACLAAGITQV
KVRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVGEDITGGLPRVQELFEARVP
RGKAPIADVTGRVRLEDGERFYKITIVPDDGGEEVVYDKLSKRQRLRVFKHEDGSERVLSDGDHVEVGQQLMEGSADPHE
VLRVQGPREVQIHLVREVQEVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLIDRAEFEAENRRVVAESGEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLNGLKENVIIGKLIPAGTGINRYRNIAVQPTEEARA
AAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR

Sequences:
NA

Specific function: NA

COG id: COG0086

COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA