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The map label for this gene is yfbK [H]

Identifier: 183222779

GI number: 183222779

Start: 3556948

End: 3558600

Strand: Reverse

Name: yfbK [H]

Synonym: LEPBI_I3438

Alternate gene names: 183222779

Gene position: 3558600-3556948 (Counterclockwise)

Preceding gene: 183222788

Following gene: 183222776

Centisome position: 98.86

GC content: 38.6

Gene sequence:

>1653_bases
GTGGTCATGTTTTTAGAAGCAAAATTGGAATACCCAATCATCAAGGAAAAGGAAGTGCAAGAAAACCATTTATTACTTAG
GTTTCGCACTCCTGCCAATCCAAATGTGGAAGAACGAAAGCCACTGGTGATTGGCCTTGCCATTGACAAAAGTTGGTCAA
TGAAAGGGGAAAAAATGGAGGCAGTGATCGATGCTTCCTGTGCTCTCGTGAATTGGCTGACAAGACATGATGCAGTTTCG
ATTGTCGCTTACTCCGCTGATGTGCAACTCATCCAACCTGTGACTCACCTAACGGAAAAAGTTTCTGTTACTGACAAAAT
ACGAAATATCCAAGTTGCTACATCTACCAATTTGAGTGGTGGTTGGTTGTCAGCGTTAAAAAGTTTGAACCAATCCAAAA
TCCCGAATGCATACAAACGAGTTTTATTATTAACAGATGGAAATCCAACTTCAGGAATCAAAGATAAGGAAGCACTCGTC
ACCATCGCAGCTGATCATTTGTCAATGGGCATCTCCACTACCACCATTGGCGTAGGGAATGATTTCAACGAAGAGATGTT
AGTTGAAATTGCCAAAGCTGGTGGTGGAAATTTTTATTATATTGATAATCCTGAAAATGCTTCTGATATTTTTTTTGAAG
AATTTGGCGATATTGGAGCTTTGTATGCGCAGGCCATCGATGTGGAACTCCAACTTGCACCAGGTGTTCGTCTCAAACAA
GTATTATCAGAAACATCTCATCAAGTTATGGAAGAATTTGATGAATTCTTAGGAGATGCCAAAACCATTTCCAGACAAAA
GATCAATTTACAATTAGGAGACCTTAGGGCTGACGATTTAAGGAATTTGGTATTACGATTGGAGATAGATGATCGAGTCA
ACGAAACCAACACTCCGTTTTGTGAAGTGAATGTATCTTATTATAATCTTTTGAAACAGAATGTTTTGGAATCGGTGAAG
CAAACTTTTTCTTTTGAAAGAGGAAAGAACACTGGCAAACAAGACCCCGATGTATTAGTAGAGATATTGATATCAAATGC
CTCTCTTGGAATCAAAGAAATCACTGATTTTGTCAGACGTGGTCACATAGAAGACGCCAAAACAATGTTATTTGGTCTTA
TACAAGACATTCGCAACAACCTTCATTATGCACCGAATGCTTTAGGTTCTCTTCTCAATCGATTGTTAGTCTTAGAATCG
AAAATGACTACAAAATCAGATGATTTGCACAAACACTTATTTATGAATTCGCAAATGATGTCCAAAGGACCAGAAAAAAT
TGATTTAAAGAATATTGAAGTTCACAATCAAATCTTTGAATACCATACCGTGGGCGACATCGATTTGTACAAATGCCCCG
AAATCAAACAAACAATTGAACAAAAAATGGCAGAAGGGTTTCGGTATATGATTTTTGATTTTTCTCACTCTTCCCATATC
GATTCGTCCGCAATCGGAATGGTGATTCAAATTGTTGGTTGGTTACGAAAGAGAGGTGGGGAACTTGTTGTGACAAACAT
AAGAGATTCCGTCAAAAAAATCTTTGAACTCACTCGGTTGTACAATCACATCCGAGTGGCGGAGAGTTTAACCTCTGCGA
ATGAGGTATTGCAGAGGATTGTGTATGCTAACGAAGGTGACGAGATCGTTTAA

Upstream 100 bases:

>100_bases
TGAATAAATTTCATGAATTTTTCCGTACATAGAGTTTTTCCCTTCTTGTCAGTTTCTTTGAAATTGTTCTTGCGAAAACA
TTAATTCGGACTTTGCTTTT

Downstream 100 bases:

>100_bases
AAAACGATTGGTATCGTTACGCTAACCAACGTTCTGCTTCTTCGATGGCTTCCTTTAATTCGCTAACCAAAGTTGGTGCA
ATGGCAACTCCTTTTTGAGT

Product: putative von Willebrand factor, type A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MVMFLEAKLEYPIIKEKEVQENHLLLRFRTPANPNVEERKPLVIGLAIDKSWSMKGEKMEAVIDASCALVNWLTRHDAVS
IVAYSADVQLIQPVTHLTEKVSVTDKIRNIQVATSTNLSGGWLSALKSLNQSKIPNAYKRVLLLTDGNPTSGIKDKEALV
TIAADHLSMGISTTTIGVGNDFNEEMLVEIAKAGGGNFYYIDNPENASDIFFEEFGDIGALYAQAIDVELQLAPGVRLKQ
VLSETSHQVMEEFDEFLGDAKTISRQKINLQLGDLRADDLRNLVLRLEIDDRVNETNTPFCEVNVSYYNLLKQNVLESVK
QTFSFERGKNTGKQDPDVLVEILISNASLGIKEITDFVRRGHIEDAKTMLFGLIQDIRNNLHYAPNALGSLLNRLLVLES
KMTTKSDDLHKHLFMNSQMMSKGPEKIDLKNIEVHNQIFEYHTVGDIDLYKCPEIKQTIEQKMAEGFRYMIFDFSHSSHI
DSSAIGMVIQIVGWLRKRGGELVVTNIRDSVKKIFELTRLYNHIRVAESLTSANEVLQRIVYANEGDEIV

Sequences:

>Translated_550_residues
MVMFLEAKLEYPIIKEKEVQENHLLLRFRTPANPNVEERKPLVIGLAIDKSWSMKGEKMEAVIDASCALVNWLTRHDAVS
IVAYSADVQLIQPVTHLTEKVSVTDKIRNIQVATSTNLSGGWLSALKSLNQSKIPNAYKRVLLLTDGNPTSGIKDKEALV
TIAADHLSMGISTTTIGVGNDFNEEMLVEIAKAGGGNFYYIDNPENASDIFFEEFGDIGALYAQAIDVELQLAPGVRLKQ
VLSETSHQVMEEFDEFLGDAKTISRQKINLQLGDLRADDLRNLVLRLEIDDRVNETNTPFCEVNVSYYNLLKQNVLESVK
QTFSFERGKNTGKQDPDVLVEILISNASLGIKEITDFVRRGHIEDAKTMLFGLIQDIRNNLHYAPNALGSLLNRLLVLES
KMTTKSDDLHKHLFMNSQMMSKGPEKIDLKNIEVHNQIFEYHTVGDIDLYKCPEIKQTIEQKMAEGFRYMIFDFSHSSHI
DSSAIGMVIQIVGWLRKRGGELVVTNIRDSVKKIFELTRLYNHIRVAESLTSANEVLQRIVYANEGDEIV
>Mature_550_residues
MVMFLEAKLEYPIIKEKEVQENHLLLRFRTPANPNVEERKPLVIGLAIDKSWSMKGEKMEAVIDASCALVNWLTRHDAVS
IVAYSADVQLIQPVTHLTEKVSVTDKIRNIQVATSTNLSGGWLSALKSLNQSKIPNAYKRVLLLTDGNPTSGIKDKEALV
TIAADHLSMGISTTTIGVGNDFNEEMLVEIAKAGGGNFYYIDNPENASDIFFEEFGDIGALYAQAIDVELQLAPGVRLKQ
VLSETSHQVMEEFDEFLGDAKTISRQKINLQLGDLRADDLRNLVLRLEIDDRVNETNTPFCEVNVSYYNLLKQNVLESVK
QTFSFERGKNTGKQDPDVLVEILISNASLGIKEITDFVRRGHIEDAKTMLFGLIQDIRNNLHYAPNALGSLLNRLLVLES
KMTTKSDDLHKHLFMNSQMMSKGPEKIDLKNIEVHNQIFEYHTVGDIDLYKCPEIKQTIEQKMAEGFRYMIFDFSHSSHI
DSSAIGMVIQIVGWLRKRGGELVVTNIRDSVKKIFELTRLYNHIRVAESLTSANEVLQRIVYANEGDEIV

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll0103 [H]

Homologues:

Organism=Escherichia coli, GI1788606, Length=224, Percent_Identity=28.125, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021908
- InterPro:   IPR022156
- InterPro:   IPR002035 [H]

Pfam domain/function: PF12034 DUF3520; PF00092 VWA; PF12450 vWF_A [H]

EC number: NA

Molecular weight: Translated: 61959; Mature: 61959

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS50801 STAS ; PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMFLEAKLEYPIIKEKEVQENHLLLRFRTPANPNVEERKPLVIGLAIDKSWSMKGEKME
CEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHH
AVIDASCALVNWLTRHDAVSIVAYSADVQLIQPVTHLTEKVSVTDKIRNIQVATSTNLSG
HHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCH
GWLSALKSLNQSKIPNAYKRVLLLTDGNPTSGIKDKEALVTIAADHLSMGISTTTIGVGN
HHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCCCCCHHEEEEEHHHHHCCCCEEEEECCC
DFNEEMLVEIAKAGGGNFYYIDNPENASDIFFEEFGDIGALYAQAIDVELQLAPGVRLKQ
CCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHCEEEEECCCHHHHH
VLSETSHQVMEEFDEFLGDAKTISRQKINLQLGDLRADDLRNLVLRLEIDDRVNETNTPF
HHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEECCCCHHHHCCEEEEEEECCCCCCCCCCE
CEVNVSYYNLLKQNVLESVKQTFSFERGKNTGKQDPDVLVEILISNASLGIKEITDFVRR
EEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHC
GHIEDAKTMLFGLIQDIRNNLHYAPNALGSLLNRLLVLESKMTTKSDDLHKHLFMNSQMM
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHH
SKGPEKIDLKNIEVHNQIFEYHTVGDIDLYKCPEIKQTIEQKMAEGFRYMIFDFSHSSHI
HCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
DSSAIGMVIQIVGWLRKRGGELVVTNIRDSVKKIFELTRLYNHIRVAESLTSANEVLQRI
CHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYANEGDEIV
HHCCCCCCCC
>Mature Secondary Structure
MVMFLEAKLEYPIIKEKEVQENHLLLRFRTPANPNVEERKPLVIGLAIDKSWSMKGEKME
CEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHH
AVIDASCALVNWLTRHDAVSIVAYSADVQLIQPVTHLTEKVSVTDKIRNIQVATSTNLSG
HHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCH
GWLSALKSLNQSKIPNAYKRVLLLTDGNPTSGIKDKEALVTIAADHLSMGISTTTIGVGN
HHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCCCCCHHEEEEEHHHHHCCCCEEEEECCC
DFNEEMLVEIAKAGGGNFYYIDNPENASDIFFEEFGDIGALYAQAIDVELQLAPGVRLKQ
CCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHCEEEEECCCHHHHH
VLSETSHQVMEEFDEFLGDAKTISRQKINLQLGDLRADDLRNLVLRLEIDDRVNETNTPF
HHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEECCCCHHHHCCEEEEEEECCCCCCCCCCE
CEVNVSYYNLLKQNVLESVKQTFSFERGKNTGKQDPDVLVEILISNASLGIKEITDFVRR
EEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHC
GHIEDAKTMLFGLIQDIRNNLHYAPNALGSLLNRLLVLESKMTTKSDDLHKHLFMNSQMM
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHH
SKGPEKIDLKNIEVHNQIFEYHTVGDIDLYKCPEIKQTIEQKMAEGFRYMIFDFSHSSHI
HCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCC
DSSAIGMVIQIVGWLRKRGGELVVTNIRDSVKKIFELTRLYNHIRVAESLTSANEVLQRI
CHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYANEGDEIV
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]