Click here to switch to the map view.

The map label for this gene is 183222756

Identifier: 183222756

GI number: 183222756

Start: 3533892

End: 3535499

Strand: Reverse

Name: 183222756

Synonym: LEPBI_I3414

Alternate gene names: NA

Gene position: 3535499-3533892 (Counterclockwise)

Preceding gene: 183222757

Following gene: 183222755

Centisome position: 98.22

GC content: 42.91

Gene sequence:

>1608_bases
ATGGGAATTCCTACATTTAACGAAAAAATCATCACTCCAAAAAAACACGCAGAAACCATCAAAACCCAACAAATCCAAAA
TGGAAAATGGGAACTCACAGCAGATGTTGTGATCATTGGATCTGGCGCAGGTGGAGCAGTCGCGGCGAGAGAACTTGCAA
AAAACGGATGGAAGGTAGTCCTCATCGAAGAGGGAAGTTATTTCACACCGGCACAATTCAATTCAGACGAATTTTTATCA
CAAGCTAGACTTTACCGCGATGCAGGTTTTATTGTCACCGAAGAACAAACGTTATCGATACTACAAGGAAAGTCGATCGG
TGGCTCCACAACTGTCAATTGGCAAACTTCTTTGTACCCTCCCGATTACGTAACCAACGAATGGAATGAACGATTCGGTT
GGCAAGGTTATTCAAGAGAAGAAATGGATCCTTTTGTTTCAGAAGTACATGAACGATTAGGTGTCCATGAAGTTCCGGAT
AACTTAATCAATGCGAACAATAATGTCTTACGAGTGGGCGGAAAAAAACTGGGACTCACACCTCTCGTCCTTCGTAATAA
TAACAGAGGTTGTATTGGACTTGGACGATGTGGACTCGGTTGTCCTATCAATGCGAAACAATCCACATTTCTCACTTGGA
TCCCTGATGCGATTGAAGCAGGTGCCACTGTGGTTTCCAATATGCGTGCCGTCAAAATTCGTGATGGCAAAATCAAAACC
GTTGTGGCTGAGTTTACACCCGATGCGTATGAAAAAGCTCCCTCTGAAATCATTGAAACCATGGAGATCAAAGCGCCAGT
TGTGATCGTGAGTGCTGGTGCCATTGAAGGCCCTGCTCTTTTGCAAAGGAGTGGGATTGGCAATGGTTGGGTCGGAAGGA
ATTTAAAAGTCCATCCAACTTCCACGATTTTTGGAAAATTTGATTCCGAAATCAAAATGTTCCAAGGCCCACCACAATCC
ATCGTGATCAAAGATGGTCACAACCAAAATGGAACCGGTTATGGGTATTGGTTAGAAGCGGCTCCATACAGACCTACACT
TGCGTCTTCCCTTGTTCCGTTTTACGGCAAACAGCAGTTTGACGTAATGAAAGATTTTACCAAGTACAATGCAGGCATTG
TACTTGTTCGTGATGGAGCGGATGGAGAAGCGAATGCAAGTGTGAAGTATAGTTTAGGCCGTAGAAAGGTGTATTTTGAA
CTCACACCAACTGATGGATTGAATATGCTCAAAGGTTTAAAGTCTCTCGCAGAGGTAACAGTTGCCGCTGGAGCCAAAGA
ATTGATTTTTCCTTTTACCAGATTCACTGAACCATACAAAGTCACAGGAAACGATAACTTTGATTGGATCTTAAAAGAAA
GCACAAGACCTGGCGACTTAACCGTTGGATCAGCTCACCCGCATGGTTCTATCCAATCAGCAAATGATCCAGAGAAGGGT
GCCGTTGATTTAAATTTGGAAATTTATGGTCATAAAAACATATTTGTCATGGATGCCTCAGTTTACCCTACAGGACTTTC
GGTGAACCCACAAATAACGACAATGAGTATAGTTCTCAGAGCTTCACGTAATTTGGCTTCGCAAAAAGAAGAAAGAACGA
AGGTCTAA

Upstream 100 bases:

>100_bases
GTGGTGTGTATGCCATCTTAAGACAAATTTCTTTTTTCCTTCTCAGTTCTGACAAAGAGTACCAAAAATTTGTCGGTTAT
ATCCAATAAAGGCGGACTCA

Downstream 100 bases:

>100_bases
CTTTTTTCCAAAAATCCCTTTCATTCCCATGGGTTCCAACTAGTTTGGAATCCGTGCGGAAATATCTTTCCTTATTATTC
ATTATTGTCATCTTTCAAAC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MGIPTFNEKIITPKKHAETIKTQQIQNGKWELTADVVIIGSGAGGAVAARELAKNGWKVVLIEEGSYFTPAQFNSDEFLS
QARLYRDAGFIVTEEQTLSILQGKSIGGSTTVNWQTSLYPPDYVTNEWNERFGWQGYSREEMDPFVSEVHERLGVHEVPD
NLINANNNVLRVGGKKLGLTPLVLRNNNRGCIGLGRCGLGCPINAKQSTFLTWIPDAIEAGATVVSNMRAVKIRDGKIKT
VVAEFTPDAYEKAPSEIIETMEIKAPVVIVSAGAIEGPALLQRSGIGNGWVGRNLKVHPTSTIFGKFDSEIKMFQGPPQS
IVIKDGHNQNGTGYGYWLEAAPYRPTLASSLVPFYGKQQFDVMKDFTKYNAGIVLVRDGADGEANASVKYSLGRRKVYFE
LTPTDGLNMLKGLKSLAEVTVAAGAKELIFPFTRFTEPYKVTGNDNFDWILKESTRPGDLTVGSAHPHGSIQSANDPEKG
AVDLNLEIYGHKNIFVMDASVYPTGLSVNPQITTMSIVLRASRNLASQKEERTKV

Sequences:

>Translated_535_residues
MGIPTFNEKIITPKKHAETIKTQQIQNGKWELTADVVIIGSGAGGAVAARELAKNGWKVVLIEEGSYFTPAQFNSDEFLS
QARLYRDAGFIVTEEQTLSILQGKSIGGSTTVNWQTSLYPPDYVTNEWNERFGWQGYSREEMDPFVSEVHERLGVHEVPD
NLINANNNVLRVGGKKLGLTPLVLRNNNRGCIGLGRCGLGCPINAKQSTFLTWIPDAIEAGATVVSNMRAVKIRDGKIKT
VVAEFTPDAYEKAPSEIIETMEIKAPVVIVSAGAIEGPALLQRSGIGNGWVGRNLKVHPTSTIFGKFDSEIKMFQGPPQS
IVIKDGHNQNGTGYGYWLEAAPYRPTLASSLVPFYGKQQFDVMKDFTKYNAGIVLVRDGADGEANASVKYSLGRRKVYFE
LTPTDGLNMLKGLKSLAEVTVAAGAKELIFPFTRFTEPYKVTGNDNFDWILKESTRPGDLTVGSAHPHGSIQSANDPEKG
AVDLNLEIYGHKNIFVMDASVYPTGLSVNPQITTMSIVLRASRNLASQKEERTKV
>Mature_534_residues
GIPTFNEKIITPKKHAETIKTQQIQNGKWELTADVVIIGSGAGGAVAARELAKNGWKVVLIEEGSYFTPAQFNSDEFLSQ
ARLYRDAGFIVTEEQTLSILQGKSIGGSTTVNWQTSLYPPDYVTNEWNERFGWQGYSREEMDPFVSEVHERLGVHEVPDN
LINANNNVLRVGGKKLGLTPLVLRNNNRGCIGLGRCGLGCPINAKQSTFLTWIPDAIEAGATVVSNMRAVKIRDGKIKTV
VAEFTPDAYEKAPSEIIETMEIKAPVVIVSAGAIEGPALLQRSGIGNGWVGRNLKVHPTSTIFGKFDSEIKMFQGPPQSI
VIKDGHNQNGTGYGYWLEAAPYRPTLASSLVPFYGKQQFDVMKDFTKYNAGIVLVRDGADGEANASVKYSLGRRKVYFEL
TPTDGLNMLKGLKSLAEVTVAAGAKELIFPFTRFTEPYKVTGNDNFDWILKESTRPGDLTVGSAHPHGSIQSANDPEKGA
VDLNLEIYGHKNIFVMDASVYPTGLSVNPQITTMSIVLRASRNLASQKEERTKV

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GMC oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000172
- InterPro:   IPR007867 [H]

Pfam domain/function: PF05199 GMC_oxred_C; PF00732 GMC_oxred_N [H]

EC number: NA

Molecular weight: Translated: 58562; Mature: 58431

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIPTFNEKIITPKKHAETIKTQQIQNGKWELTADVVIIGSGAGGAVAARELAKNGWKVV
CCCCCCCCEEECCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHCCCEEE
LIEEGSYFTPAQFNSDEFLSQARLYRDAGFIVTEEQTLSILQGKSIGGSTTVNWQTSLYP
EECCCCEECCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCEEEEEEEECCC
PDYVTNEWNERFGWQGYSREEMDPFVSEVHERLGVHEVPDNLINANNNVLRVGGKKLGLT
CCCCCCCHHHHCCCCCCCHHHCCHHHHHHHHHCCCCCCCHHHHCCCCCEEEECCCCCCCE
PLVLRNNNRGCIGLGRCGLGCPINAKQSTFLTWIPDAIEAGATVVSNMRAVKIRDGKIKT
EEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCHHHHCCHHHHCCCEEEEEECCCEEE
VVAEFTPDAYEKAPSEIIETMEIKAPVVIVSAGAIEGPALLQRSGIGNGWVGRNLKVHPT
EEEECCCCHHHHCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCEEECCC
STIFGKFDSEIKMFQGPPQSIVIKDGHNQNGTGYGYWLEAAPYRPTLASSLVPFYGKQQF
HHEECCCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCHH
DVMKDFTKYNAGIVLVRDGADGEANASVKYSLGRRKVYFELTPTDGLNMLKGLKSLAEVT
HHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHH
VAAGAKELIFPFTRFTEPYKVTGNDNFDWILKESTRPGDLTVGSAHPHGSIQSANDPEKG
HHCCCHHHHEEHHHCCCCEEEECCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCC
AVDLNLEIYGHKNIFVMDASVYPTGLSVNPQITTMSIVLRASRNLASQKEERTKV
EEEEEEEEEECCEEEEEECCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GIPTFNEKIITPKKHAETIKTQQIQNGKWELTADVVIIGSGAGGAVAARELAKNGWKVV
CCCCCCCEEECCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHCCCEEE
LIEEGSYFTPAQFNSDEFLSQARLYRDAGFIVTEEQTLSILQGKSIGGSTTVNWQTSLYP
EECCCCEECCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCEEEEEEEECCC
PDYVTNEWNERFGWQGYSREEMDPFVSEVHERLGVHEVPDNLINANNNVLRVGGKKLGLT
CCCCCCCHHHHCCCCCCCHHHCCHHHHHHHHHCCCCCCCHHHHCCCCCEEEECCCCCCCE
PLVLRNNNRGCIGLGRCGLGCPINAKQSTFLTWIPDAIEAGATVVSNMRAVKIRDGKIKT
EEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCHHHHCCHHHHCCCEEEEEECCCEEE
VVAEFTPDAYEKAPSEIIETMEIKAPVVIVSAGAIEGPALLQRSGIGNGWVGRNLKVHPT
EEEECCCCHHHHCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCEEECCC
STIFGKFDSEIKMFQGPPQSIVIKDGHNQNGTGYGYWLEAAPYRPTLASSLVPFYGKQQF
HHEECCCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCHH
DVMKDFTKYNAGIVLVRDGADGEANASVKYSLGRRKVYFELTPTDGLNMLKGLKSLAEVT
HHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHH
VAAGAKELIFPFTRFTEPYKVTGNDNFDWILKESTRPGDLTVGSAHPHGSIQSANDPEKG
HHCCCHHHHEEHHHCCCCEEEECCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCC
AVDLNLEIYGHKNIFVMDASVYPTGLSVNPQITTMSIVLRASRNLASQKEERTKV
EEEEEEEEEECCEEEEEECCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]