| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222715
Identifier: 183222715
GI number: 183222715
Start: 3486236
End: 3488770
Strand: Reverse
Name: 183222715
Synonym: LEPBI_I3371
Alternate gene names: NA
Gene position: 3488770-3486236 (Counterclockwise)
Preceding gene: 183222716
Following gene: 183222714
Centisome position: 96.92
GC content: 34.95
Gene sequence:
>2535_bases ATGATGACGAAAGACCCTTATCATCTCATTGATAATTATAAAACCATCCCTGGTGTTTACGATGAGTTGTATGATTTTGA CGGTCAGATACGAAACAAATATAAGTTTTTAGTAAAATCTTTCCAAGAACTTGGGCCTGCAGAGTTAATCAACCGCAGAC GAGATACAGATCGTATCTTACGAGAAAATGGAGTGACTTATAATCTTTACCAATCGGAACAACGGGAAGCAAAAGAAAGA CCTTGGGAGTTGGACTTATTTCCTCTTGTCATGGAAAGTGAGGAATGGAGAATTTTAGAGAGAGGTCTAAACCAAAGAGC TGATCTTTTAGACGCATTGATACGAGATGTTTATTCAAAAAGAAGATTGTTGTATGAGAAAAAAATACCAGCAGAAATTT TATTCAATGAAACATCGTTTTTACGTGCTTGTGACGGGATGTATGAATCGAATCAATTTTTAGCAAAAAATCCAGCGTTA ATGTTTTTTGTTTGTGATTTGATCCGTGCATCTGATGGAAATTTTTATGTTTTGAACGATCGTGTACAAGCTCCTTCTGG ATCAGGTTATTCCTTAGAAAATAGAATTGTTTTATCAAGAATATTTCCAAGTATGTATCGTGATGCCATGGTGCATCGCG TTGCCGTATATTTTCGATCGCTACGAAAATCACTAACACAATTATCTGGTGTTAGTGGAAGAGAACCTTTAATCGTTTTA TTAACTCCAGGTCCTTCGAATGAAACATATTTTGAACATGCTTATTTAGCAGGATATTTAGGTTATACTCTAGTGCAAGG GGAAGACTTAACTGTACGAAAAAACAAAGTATATATGAAGACTGTTGAAGGATTGCAACAAGTTGATTTAATTTTACGAA GAGTAGATGATGATTTTATGGATCCTCTTGAATTAAAAGGAGATTCATTACTAGGAATTCCTGGATTATTAGAGTCAGTT CGGTCAGGCAATGTAAAAATTGCAAATCCAATTGGAACAGGTTTTTTAGAGAATCGCGCACTTTTACCTTTTTATTCAGA GTTGTGTAGGTTTTATTTGGGAGAAGATTTAATTCTTCCGATGGCTCCTACTTACTGGTTAGGTAACAATCAACAATTTC AATTGGTTTTACAAAATCCAGAAAAATATGTTTTTAAAACCGTTTCCCGTACAGATGAAGAATTGCCTGTTACATTTGTT GAATTGAGTGGCCAGAGAAAGGATGTATTTTTAGAAAAATTAAGACAAGCTCCAAAACGATTCATTGCACAAGAAATGAT CCAATCTGCCACAGTACCGGTATTAGGTGAAAATGGATTTCGTCCTGGCAGAGCAATTATGCGTACCTTTGTATCATCTT CTGGTTCTGGTTACCAAACCATGGCGGGAGGGCTTGTCAGAGTGTCGCCGAGTCTCGATGATTTTTTTATCACAAGCCAA CGTGGTGCTTGGAGTAAAGATTTATGGGTATTATCGACAGAAACTCAAAAAGAAGAATCATTACTTGTTCCTAAATCAGA TCAAATTTTGATTTCTCGCAAAAGTTCTGGTGTACCAAGCAGAGTTGCTGATAATTTATTTTGGTTGGCTCGTTACTTAG AAAGATCCGAAAACCAAACTCGAGTGATTCGAGAAGCAGTTTTTAAAATTCTACAAGTCGAAGATGGTTACGAAAAGGAA TCATTAGAAAATATATTAAAACTTGTTACACATGTAACAAATAGTTATCCAGGATTTTTAGGAGATGATTCCGGGGAACT TTTCGCAAATCCATTTCCTGAATTGCAACGTTTGACCGTCGATAGGAATATTGTAGGAAGTTTAGGGTTTCATTTAAGAA GTTTGGTTTTGGCTTCAAAATCGGTAAGAGATCGACTTTCCGATGATATGAAGAAAATTCTTCTTCATTTAGAAGATCAA TCAAGTTATGGAATCGAATCTTATGATCAAATAATAGATTTTCTTCAAAAGATCATTGTGAATCTATCATCACTCACAGG ACTTTCATTCGAGAACATGAGTCGGGAGTCTGGATGGTATTTTTTAAATCTTGGAAGAAGAATTGAAAGATCAATCAATA TGATACTCATGTTACAAGGAATGATTCAGTGGAAAAGTTTCGAAGACAAATCCTCATTCGAAACATTTTTGAGAATTAGC GATATCCGTTTAACATATAACCGTCGTTACTCTGGTAAAATTGATCAAGAATCTGTTTTGGATATTCTTTTGTTTGATAC ATCAAATCCAAGATCCTTGGCATATCAATTAGAACAGATTAATGCAGATTTACAGTTTTTGCCAGGCAAAGATAAAAAAA CAGTTTATTCAGAAGATAGAGCTGCTTTACAGTTGTATACTCATTTTAAGATGAAAGACATCTCAATTTTCTTCGAATCA GAATCGCCGTTAACTGCCGTATCAATTTGGTTAGAAGAGTTACATGGATATTTGAGATTATTATCAGAATCACTATCTTC TCGTTACTTCAATTATACGGAAGAGCAAACAAGAATTGGTGATACAAATGGCTGA
Upstream 100 bases:
>100_bases GACACATGGTCACAAAATAGGAAAGAGTTTACCTCCGATACGATTGGAAAATAAAGCCTTTCCTTGTACATTGGATTTAA GAATGGTTACTTCTAAGTAA
Downstream 100 bases:
>100_bases TTTCAAAGTTATCCATAAAACAAAGTATAGTTATGATGATTTTGTAGCGTATTGTCATAATATGGCCCACATGTATCCAT TAACAACCACTCATCAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 844; Mature: 844
Protein sequence:
>844_residues MMTKDPYHLIDNYKTIPGVYDELYDFDGQIRNKYKFLVKSFQELGPAELINRRRDTDRILRENGVTYNLYQSEQREAKER PWELDLFPLVMESEEWRILERGLNQRADLLDALIRDVYSKRRLLYEKKIPAEILFNETSFLRACDGMYESNQFLAKNPAL MFFVCDLIRASDGNFYVLNDRVQAPSGSGYSLENRIVLSRIFPSMYRDAMVHRVAVYFRSLRKSLTQLSGVSGREPLIVL LTPGPSNETYFEHAYLAGYLGYTLVQGEDLTVRKNKVYMKTVEGLQQVDLILRRVDDDFMDPLELKGDSLLGIPGLLESV RSGNVKIANPIGTGFLENRALLPFYSELCRFYLGEDLILPMAPTYWLGNNQQFQLVLQNPEKYVFKTVSRTDEELPVTFV ELSGQRKDVFLEKLRQAPKRFIAQEMIQSATVPVLGENGFRPGRAIMRTFVSSSGSGYQTMAGGLVRVSPSLDDFFITSQ RGAWSKDLWVLSTETQKEESLLVPKSDQILISRKSSGVPSRVADNLFWLARYLERSENQTRVIREAVFKILQVEDGYEKE SLENILKLVTHVTNSYPGFLGDDSGELFANPFPELQRLTVDRNIVGSLGFHLRSLVLASKSVRDRLSDDMKKILLHLEDQ SSYGIESYDQIIDFLQKIIVNLSSLTGLSFENMSRESGWYFLNLGRRIERSINMILMLQGMIQWKSFEDKSSFETFLRIS DIRLTYNRRYSGKIDQESVLDILLFDTSNPRSLAYQLEQINADLQFLPGKDKKTVYSEDRAALQLYTHFKMKDISIFFES ESPLTAVSIWLEELHGYLRLLSESLSSRYFNYTEEQTRIGDTNG
Sequences:
>Translated_844_residues MMTKDPYHLIDNYKTIPGVYDELYDFDGQIRNKYKFLVKSFQELGPAELINRRRDTDRILRENGVTYNLYQSEQREAKER PWELDLFPLVMESEEWRILERGLNQRADLLDALIRDVYSKRRLLYEKKIPAEILFNETSFLRACDGMYESNQFLAKNPAL MFFVCDLIRASDGNFYVLNDRVQAPSGSGYSLENRIVLSRIFPSMYRDAMVHRVAVYFRSLRKSLTQLSGVSGREPLIVL LTPGPSNETYFEHAYLAGYLGYTLVQGEDLTVRKNKVYMKTVEGLQQVDLILRRVDDDFMDPLELKGDSLLGIPGLLESV RSGNVKIANPIGTGFLENRALLPFYSELCRFYLGEDLILPMAPTYWLGNNQQFQLVLQNPEKYVFKTVSRTDEELPVTFV ELSGQRKDVFLEKLRQAPKRFIAQEMIQSATVPVLGENGFRPGRAIMRTFVSSSGSGYQTMAGGLVRVSPSLDDFFITSQ RGAWSKDLWVLSTETQKEESLLVPKSDQILISRKSSGVPSRVADNLFWLARYLERSENQTRVIREAVFKILQVEDGYEKE SLENILKLVTHVTNSYPGFLGDDSGELFANPFPELQRLTVDRNIVGSLGFHLRSLVLASKSVRDRLSDDMKKILLHLEDQ SSYGIESYDQIIDFLQKIIVNLSSLTGLSFENMSRESGWYFLNLGRRIERSINMILMLQGMIQWKSFEDKSSFETFLRIS DIRLTYNRRYSGKIDQESVLDILLFDTSNPRSLAYQLEQINADLQFLPGKDKKTVYSEDRAALQLYTHFKMKDISIFFES ESPLTAVSIWLEELHGYLRLLSESLSSRYFNYTEEQTRIGDTNG >Mature_844_residues MMTKDPYHLIDNYKTIPGVYDELYDFDGQIRNKYKFLVKSFQELGPAELINRRRDTDRILRENGVTYNLYQSEQREAKER PWELDLFPLVMESEEWRILERGLNQRADLLDALIRDVYSKRRLLYEKKIPAEILFNETSFLRACDGMYESNQFLAKNPAL MFFVCDLIRASDGNFYVLNDRVQAPSGSGYSLENRIVLSRIFPSMYRDAMVHRVAVYFRSLRKSLTQLSGVSGREPLIVL LTPGPSNETYFEHAYLAGYLGYTLVQGEDLTVRKNKVYMKTVEGLQQVDLILRRVDDDFMDPLELKGDSLLGIPGLLESV RSGNVKIANPIGTGFLENRALLPFYSELCRFYLGEDLILPMAPTYWLGNNQQFQLVLQNPEKYVFKTVSRTDEELPVTFV ELSGQRKDVFLEKLRQAPKRFIAQEMIQSATVPVLGENGFRPGRAIMRTFVSSSGSGYQTMAGGLVRVSPSLDDFFITSQ RGAWSKDLWVLSTETQKEESLLVPKSDQILISRKSSGVPSRVADNLFWLARYLERSENQTRVIREAVFKILQVEDGYEKE SLENILKLVTHVTNSYPGFLGDDSGELFANPFPELQRLTVDRNIVGSLGFHLRSLVLASKSVRDRLSDDMKKILLHLEDQ SSYGIESYDQIIDFLQKIIVNLSSLTGLSFENMSRESGWYFLNLGRRIERSINMILMLQGMIQWKSFEDKSSFETFLRIS DIRLTYNRRYSGKIDQESVLDILLFDTSNPRSLAYQLEQINADLQFLPGKDKKTVYSEDRAALQLYTHFKMKDISIFFES ESPLTAVSIWLEELHGYLRLLSESLSSRYFNYTEEQTRIGDTNG
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007296 - InterPro: IPR007297 - InterPro: IPR007302 [H]
Pfam domain/function: PF04168 DUF403; PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 97315; Mature: 97315
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTKDPYHLIDNYKTIPGVYDELYDFDGQIRNKYKFLVKSFQELGPAELINRRRDTDRIL CCCCCCHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHH RENGVTYNLYQSEQREAKERPWELDLFPLVMESEEWRILERGLNQRADLLDALIRDVYSK HHCCCEEEEECCHHHHHHCCCCEEEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHH RRLLYEKKIPAEILFNETSFLRACDGMYESNQFLAKNPALMFFVCDLIRASDGNFYVLND HHHHHHHCCCHHEEECCHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHCCCCCEEEEEC RVQAPSGSGYSLENRIVLSRIFPSMYRDAMVHRVAVYFRSLRKSLTQLSGVSGREPLIVL EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE LTPGPSNETYFEHAYLAGYLGYTLVQGEDLTVRKNKVYMKTVEGLQQVDLILRRVDDDFM ECCCCCCCCHHHHHHHHHHHHHEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHCHHHC DPLELKGDSLLGIPGLLESVRSGNVKIANPIGTGFLENRALLPFYSELCRFYLGEDLILP CCHHCCCCCEECCHHHHHHHHCCCEEEECCCCCCHHCCCCCCHHHHHHHHHHCCCCEEEC MAPTYWLGNNQQFQLVLQNPEKYVFKTVSRTDEELPVTFVELSGQRKDVFLEKLRQAPKR CCCEEEECCCCEEEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH FIAQEMIQSATVPVLGENGFRPGRAIMRTFVSSSGSGYQTMAGGLVRVSPSLDDFFITSQ HHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCCCCHHHCCCEEEECCCCCCEEEECC RGAWSKDLWVLSTETQKEESLLVPKSDQILISRKSSGVPSRVADNLFWLARYLERSENQT CCCCCCCEEEEECCCCCCCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHH RVIREAVFKILQVEDGYEKESLENILKLVTHVTNSYPGFLGDDSGELFANPFPELQRLTV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH DRNIVGSLGFHLRSLVLASKSVRDRLSDDMKKILLHLEDQSSYGIESYDQIIDFLQKIIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHH NLSSLTGLSFENMSRESGWYFLNLGRRIERSINMILMLQGMIQWKSFEDKSSFETFLRIS HHHHHCCCCHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHE DIRLTYNRRYSGKIDQESVLDILLFDTSNPRSLAYQLEQINADLQFLPGKDKKTVYSEDR EEEEEECCCCCCCCCHHHHEEEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCCEECCCH AALQLYTHFKMKDISIFFESESPLTAVSIWLEELHGYLRLLSESLSSRYFNYTEEQTRIG HHHHHHHHEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC DTNG CCCC >Mature Secondary Structure MMTKDPYHLIDNYKTIPGVYDELYDFDGQIRNKYKFLVKSFQELGPAELINRRRDTDRIL CCCCCCHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHH RENGVTYNLYQSEQREAKERPWELDLFPLVMESEEWRILERGLNQRADLLDALIRDVYSK HHCCCEEEEECCHHHHHHCCCCEEEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHH RRLLYEKKIPAEILFNETSFLRACDGMYESNQFLAKNPALMFFVCDLIRASDGNFYVLND HHHHHHHCCCHHEEECCHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHCCCCCEEEEEC RVQAPSGSGYSLENRIVLSRIFPSMYRDAMVHRVAVYFRSLRKSLTQLSGVSGREPLIVL EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE LTPGPSNETYFEHAYLAGYLGYTLVQGEDLTVRKNKVYMKTVEGLQQVDLILRRVDDDFM ECCCCCCCCHHHHHHHHHHHHHEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHCHHHC DPLELKGDSLLGIPGLLESVRSGNVKIANPIGTGFLENRALLPFYSELCRFYLGEDLILP CCHHCCCCCEECCHHHHHHHHCCCEEEECCCCCCHHCCCCCCHHHHHHHHHHCCCCEEEC MAPTYWLGNNQQFQLVLQNPEKYVFKTVSRTDEELPVTFVELSGQRKDVFLEKLRQAPKR CCCEEEECCCCEEEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH FIAQEMIQSATVPVLGENGFRPGRAIMRTFVSSSGSGYQTMAGGLVRVSPSLDDFFITSQ HHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCCCCHHHCCCEEEECCCCCCEEEECC RGAWSKDLWVLSTETQKEESLLVPKSDQILISRKSSGVPSRVADNLFWLARYLERSENQT CCCCCCCEEEEECCCCCCCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHH RVIREAVFKILQVEDGYEKESLENILKLVTHVTNSYPGFLGDDSGELFANPFPELQRLTV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH DRNIVGSLGFHLRSLVLASKSVRDRLSDDMKKILLHLEDQSSYGIESYDQIIDFLQKIIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHH NLSSLTGLSFENMSRESGWYFLNLGRRIERSINMILMLQGMIQWKSFEDKSSFETFLRIS HHHHHCCCCHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHE DIRLTYNRRYSGKIDQESVLDILLFDTSNPRSLAYQLEQINADLQFLPGKDKKTVYSEDR EEEEEECCCCCCCCCHHHHEEEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCCEECCCH AALQLYTHFKMKDISIFFESESPLTAVSIWLEELHGYLRLLSESLSSRYFNYTEEQTRIG HHHHHHHHEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC DTNG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]