| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222668
Identifier: 183222668
GI number: 183222668
Start: 3434907
End: 3435947
Strand: Reverse
Name: 183222668
Synonym: LEPBI_I3323
Alternate gene names: NA
Gene position: 3435947-3434907 (Counterclockwise)
Preceding gene: 183222670
Following gene: 183222667
Centisome position: 95.45
GC content: 39.67
Gene sequence:
>1041_bases ATGCGTATCACTCAAATTTGGACGATTTTAACTATTTTCACCCTTTTTACCTCGATAGTAGCCTGCGGAGGCCAAATCCA AGAGAAACCCATTGTTGGTTGTGAACGAATTTCTGGCACCCCAGGCCCAGAAGACTTTGATCTCATCCGAGAAACAGCAA CCATCATTGTATCTTCCCATGAAAGGCGAAATGGATTAAAAGACATTGGTGCTTTATTTGAAATTTCTTTCGCAAACCCT AACCAAAAATTAGAAGCCAAAAAAATCGAAAGCAATTACCCAAAAAACTTTCGTCCGCATGGTATCAGTTATGCGAAAAT TAATGGAGTGGACACACTCGCTGTGATTTCTCACACCTTGGATGATGATACCCCTCATACACTCGAAATCTTTGAGAGAA CAAAGGTTGGAAAATGGACACATACCAAAACTTTAAGCGATCCATCACTCACAAGTCCCAATGATATCTTTATGAACGAG TCCGGCGAAATTTTTACATCCAACGATAACGGAACCAGTAATGCGTTTCGTAAGTATTGGGACATGATCATTCGCAGTGG AAGGGCTGATATCTCTTATTATAATGGAAACACATTCCAAAACTTAGGTGTACCTGTGATGTTAGGGAATGGAATTTACA TTCGTAAAAATGGAAAACAAGAACTTTTGTATCGTTCTGTGTTTTCTGAAAAAGCCATCCGAGTGTATGAAGTGAATCGT GAAAATGGCAAAATCAGTTTGAAGTATTTGGAATCCATTGCAATTGGAGCAGGTCCCGATAATATATTAGAAGATGAATC AGGGATGTTATGGCTTGCAGCCCATGATTCCACTTACAAATTCATCCGCCATGTCATGAACCGAACGAATTTAGCACCCA CTCGCGTATTTAAAATCAATCCAAATACCAAGGAAGTGATAGAAGTGTATGCGAACGAAGGTGGAGAAATTTCTGCAGGA AGCACAGGTCTTGCCTACAAAGACAAACTTCTCATTTCACAAGTATTCGAAGATTTTTTATTGGTTTGCCCGAGACCATA G
Upstream 100 bases:
>100_bases TCGGAGGGAACTCCTTCTTGGTTCCATTATTTTGCAGTGCACAATAATGTCTAGAAAGAAATTGATAGTGGAAACTGAAT TCTTACGGTAAGATAGGCAG
Downstream 100 bases:
>100_bases TAGACATATCTAACAACAATAATACGATAGTGGATCGAAGCTGTCGTATTATATTAATAATATTTAAACGAATTCACTGA TGATACCCAACGAAAACTCT
Product: putative arylesterase
Products: NA
Alternate protein names: Paraoxonase
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MRITQIWTILTIFTLFTSIVACGGQIQEKPIVGCERISGTPGPEDFDLIRETATIIVSSHERRNGLKDIGALFEISFANP NQKLEAKKIESNYPKNFRPHGISYAKINGVDTLAVISHTLDDDTPHTLEIFERTKVGKWTHTKTLSDPSLTSPNDIFMNE SGEIFTSNDNGTSNAFRKYWDMIIRSGRADISYYNGNTFQNLGVPVMLGNGIYIRKNGKQELLYRSVFSEKAIRVYEVNR ENGKISLKYLESIAIGAGPDNILEDESGMLWLAAHDSTYKFIRHVMNRTNLAPTRVFKINPNTKEVIEVYANEGGEISAG STGLAYKDKLLISQVFEDFLLVCPRP
Sequences:
>Translated_346_residues MRITQIWTILTIFTLFTSIVACGGQIQEKPIVGCERISGTPGPEDFDLIRETATIIVSSHERRNGLKDIGALFEISFANP NQKLEAKKIESNYPKNFRPHGISYAKINGVDTLAVISHTLDDDTPHTLEIFERTKVGKWTHTKTLSDPSLTSPNDIFMNE SGEIFTSNDNGTSNAFRKYWDMIIRSGRADISYYNGNTFQNLGVPVMLGNGIYIRKNGKQELLYRSVFSEKAIRVYEVNR ENGKISLKYLESIAIGAGPDNILEDESGMLWLAAHDSTYKFIRHVMNRTNLAPTRVFKINPNTKEVIEVYANEGGEISAG STGLAYKDKLLISQVFEDFLLVCPRP >Mature_346_residues MRITQIWTILTIFTLFTSIVACGGQIQEKPIVGCERISGTPGPEDFDLIRETATIIVSSHERRNGLKDIGALFEISFANP NQKLEAKKIESNYPKNFRPHGISYAKINGVDTLAVISHTLDDDTPHTLEIFERTKVGKWTHTKTLSDPSLTSPNDIFMNE SGEIFTSNDNGTSNAFRKYWDMIIRSGRADISYYNGNTFQNLGVPVMLGNGIYIRKNGKQELLYRSVFSEKAIRVYEVNR ENGKISLKYLESIAIGAGPDNILEDESGMLWLAAHDSTYKFIRHVMNRTNLAPTRVFKINPNTKEVIEVYANEGGEISAG STGLAYKDKLLISQVFEDFLLVCPRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923106, Length=329, Percent_Identity=25.531914893617, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI66529294, Length=249, Percent_Identity=28.5140562248996, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI29788996, Length=314, Percent_Identity=24.203821656051, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17506459, Length=311, Percent_Identity=25.4019292604502, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI25149993, Length=257, Percent_Identity=25.6809338521401, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI193202498, Length=325, Percent_Identity=24.9230769230769, Blast_Score=78, Evalue=7e-15, Organism=Caenorhabditis elegans, GI212645472, Length=325, Percent_Identity=24.9230769230769, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38839; Mature: 38839
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITQIWTILTIFTLFTSIVACGGQIQEKPIVGCERISGTPGPEDFDLIRETATIIVSSH CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHEEEECC ERRNGLKDIGALFEISFANPNQKLEAKKIESNYPKNFRPHGISYAKINGVDTLAVISHTL HHHCCHHHHHHEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHC DDDTPHTLEIFERTKVGKWTHTKTLSDPSLTSPNDIFMNESGEIFTSNDNGTSNAFRKYW CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCHHHHHHHH DMIIRSGRADISYYNGNTFQNLGVPVMLGNGIYIRKNGKQELLYRSVFSEKAIRVYEVNR HHHHHCCCCCEEEECCCCCHHCCCEEEECCCEEEEECCHHHHHHHHHHHHCCEEEEEEEC ENGKISLKYLESIAIGAGPDNILEDESGMLWLAAHDSTYKFIRHVMNRTNLAPTRVFKIN CCCEEEEEEEEHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEC PNTKEVIEVYANEGGEISAGSTGLAYKDKLLISQVFEDFLLVCPRP CCHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHEECCCC >Mature Secondary Structure MRITQIWTILTIFTLFTSIVACGGQIQEKPIVGCERISGTPGPEDFDLIRETATIIVSSH CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHEEEECC ERRNGLKDIGALFEISFANPNQKLEAKKIESNYPKNFRPHGISYAKINGVDTLAVISHTL HHHCCHHHHHHEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHC DDDTPHTLEIFERTKVGKWTHTKTLSDPSLTSPNDIFMNESGEIFTSNDNGTSNAFRKYW CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCHHHHHHHH DMIIRSGRADISYYNGNTFQNLGVPVMLGNGIYIRKNGKQELLYRSVFSEKAIRVYEVNR HHHHHCCCCCEEEECCCCCHHCCCEEEECCCEEEEECCHHHHHHHHHHHHCCEEEEEEEC ENGKISLKYLESIAIGAGPDNILEDESGMLWLAAHDSTYKFIRHVMNRTNLAPTRVFKIN CCCEEEEEEEEHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEC PNTKEVIEVYANEGGEISAGSTGLAYKDKLLISQVFEDFLLVCPRP CCHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA