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The map label for this gene is hchA [H]

Identifier: 183222521

GI number: 183222521

Start: 3288152

End: 3288928

Strand: Reverse

Name: hchA [H]

Synonym: LEPBI_I3176

Alternate gene names: 183222521

Gene position: 3288928-3288152 (Counterclockwise)

Preceding gene: 183222522

Following gene: 183222519

Centisome position: 91.37

GC content: 36.68

Gene sequence:

>777_bases
TTGTTGGCAAATCCAAAGGGAAAAGCAAGGATACTTGTTGTGATGAGTGCCGCCGATTTCATTTTGTTAGATGGTGTCAC
CAAACACCCAACAGGCGTTTTTTTGAATGAACTGTATTTTCCAGTGAAAACATTAAGTGACAAAGGACATCAAATCGTAT
TTGCCACTCCATTGGGAAAAATATCCACAATCGATCCCGAAAGTGTAAGGGCAAAGTATTGGAAATCCATTGCAGAAAAA
GAGGAAGCGATTCAGTTTCTATTTTCGTTAACGAATTTCAAAAATCCCATTTCCTTAGAGCAAGCAATTAAGGATGATCA
GAACTTTGTGGGAATTCTTGTGCCAGGTGGGCAAGGTCTAATGACTGATTTATTATATGATGAAAAGATTCCCGAATTAC
TCAGACGATTCCATAAAAAACAAAAACCAATTGGTATCGTTTGCCATGCACCTGCTTTGTTGACAAGTTTACGTCTCGAC
AAAGAAAAGGAAAATTTTATCTTCAAAGGGTATCAAGTTAATTCAGTGACAAAAATGGAAGAATGGTTTATTGAAACCTT
TGTGATGAAGGGAAAACCAAAAGTCAGAAACATTTCAGGATCTCTAAAAGACTTAGGTATGGAATACAAATCTTCTTTTT
TACCTGGTCGAAGTTATGCGATCCGAGATCGAAATTTAGTGACATCTCAAAATCCATTTTCTGGAGAAGAATTCAGTGAA
ATGTATTGGAAGGCGGTAGAGGATTATTTGCAAATGAATCCTTCTTTAACCGACTAA

Upstream 100 bases:

>100_bases
GAAACAAAAACTGGTTCGAATAGATTTGAGAAGAAGGGGAAAATTAAAATTAAAACTCATGATTTTCATTATTGGGGCAA
TCAGTATTTTCTCAAATGGA

Downstream 100 bases:

>100_bases
GGGCAACATTCGTGATTCCCAAGTAGGCGGCTTGGTCTATTTGGGAGATTCGGGATTCATTTTCAAAAAATTCATCGATA
AAATTTTGGTAACGCTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Hsp31 [H]

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MLANPKGKARILVVMSAADFILLDGVTKHPTGVFLNELYFPVKTLSDKGHQIVFATPLGKISTIDPESVRAKYWKSIAEK
EEAIQFLFSLTNFKNPISLEQAIKDDQNFVGILVPGGQGLMTDLLYDEKIPELLRRFHKKQKPIGIVCHAPALLTSLRLD
KEKENFIFKGYQVNSVTKMEEWFIETFVMKGKPKVRNISGSLKDLGMEYKSSFLPGRSYAIRDRNLVTSQNPFSGEEFSE
MYWKAVEDYLQMNPSLTD

Sequences:

>Translated_258_residues
MLANPKGKARILVVMSAADFILLDGVTKHPTGVFLNELYFPVKTLSDKGHQIVFATPLGKISTIDPESVRAKYWKSIAEK
EEAIQFLFSLTNFKNPISLEQAIKDDQNFVGILVPGGQGLMTDLLYDEKIPELLRRFHKKQKPIGIVCHAPALLTSLRLD
KEKENFIFKGYQVNSVTKMEEWFIETFVMKGKPKVRNISGSLKDLGMEYKSSFLPGRSYAIRDRNLVTSQNPFSGEEFSE
MYWKAVEDYLQMNPSLTD
>Mature_258_residues
MLANPKGKARILVVMSAADFILLDGVTKHPTGVFLNELYFPVKTLSDKGHQIVFATPLGKISTIDPESVRAKYWKSIAEK
EEAIQFLFSLTNFKNPISLEQAIKDDQNFVGILVPGGQGLMTDLLYDEKIPELLRRFHKKQKPIGIVCHAPALLTSLRLD
KEKENFIFKGYQVNSVTKMEEWFIETFVMKGKPKVRNISGSLKDLGMEYKSSFLPGRSYAIRDRNLVTSQNPFSGEEFSE
MYWKAVEDYLQMNPSLTD

Specific function: Uses temperature-induced exposure of structured hydrophobic domains to capture and stabilize early unfolding protein intermediates under severe thermal stress. It rapidly releases them once stress has abated [H]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C56 family. HchA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017283
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 29319; Mature: 29319

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLANPKGKARILVVMSAADFILLDGVTKHPTGVFLNELYFPVKTLSDKGHQIVFATPLGK
CCCCCCCCEEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
ISTIDPESVRAKYWKSIAEKEEAIQFLFSLTNFKNPISLEQAIKDDQNFVGILVPGGQGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCH
MTDLLYDEKIPELLRRFHKKQKPIGIVCHAPALLTSLRLDKEKENFIFKGYQVNSVTKME
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCEEEECEEECCHHHHH
EWFIETFVMKGKPKVRNISGSLKDLGMEYKSSFLPGRSYAIRDRNLVTSQNPFSGEEFSE
HHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCEECCCCCCCCHHHHH
MYWKAVEDYLQMNPSLTD
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLANPKGKARILVVMSAADFILLDGVTKHPTGVFLNELYFPVKTLSDKGHQIVFATPLGK
CCCCCCCCEEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
ISTIDPESVRAKYWKSIAEKEEAIQFLFSLTNFKNPISLEQAIKDDQNFVGILVPGGQGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCH
MTDLLYDEKIPELLRRFHKKQKPIGIVCHAPALLTSLRLDKEKENFIFKGYQVNSVTKME
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCEEEECEEECCHHHHH
EWFIETFVMKGKPKVRNISGSLKDLGMEYKSSFLPGRSYAIRDRNLVTSQNPFSGEEFSE
HHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCEECCCCCCCCHHHHH
MYWKAVEDYLQMNPSLTD
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA