| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is mreC
Identifier: 183222419
GI number: 183222419
Start: 3182854
End: 3184050
Strand: Direct
Name: mreC
Synonym: LEPBI_I3073
Alternate gene names: NA
Gene position: 3182854-3184050 (Clockwise)
Preceding gene: 183222418
Following gene: 183222420
Centisome position: 88.42
GC content: 43.61
Gene sequence:
>1197_bases ATGAAGTGGAATCGCATCAATCAAAATGACGAATTGTTTTCCCTACTTTTCGTATTCCTGTTTTCCTTTACTTCCCTAAT TTGGAACGGCAACTTCATGGTAAGAGGGATTGCCAGCTTTCAGGGTGTAGGCGACTTTTTTTCTGGGTCCTTTGATTCCT TTGGCTCCCTTATCAAAAGTAGTTATAACAAACTGGAATCCTTCGAACGAGTGAGAGAAGAACGTGACTCCTGTTTGAAT GTGATGGAAGAGTACCGCCAGCTCTCCAAAGATGTGGAGCGCCTCAAAGCAGAAAACGCCATCCTCCGCCAAGAGTTAAA CTTCCCTCTGCGCATTGAATACCCAACCATACGTGCCGAAGTACTCAGTGTTCGTTTGAATGCCATTTACAGAACCATCA TCATCAACAAAGGTTCCGAATCGGGGATCAAACCTTATATGCCAGTCGTTGCACGTGCGTTAGACGAAAAAGGAAAATTC ACAGAGGCACTTGTCGGAAAAATCATTGCGGTCTCAAAAGGATCAGCTGTCATCCAACCCATCATCAATTCCAACTTTTC CATGGGAGTCTCCATCCCAGGCACCAACTTATGGGCGTCTCTCAATGGGAACAGTGGCCGTGGAACAGACGTTTTGTTAG ATTACATTGATTCCGGAATCGTAATCGATCCAAAAGCCATCGGAAATTTTCCAATGGGACCAAATCCACCACCCACTTCA GCAAACACAATGTTTACAGAAGGGTTTAGTAAAATTGGAAAAGCGGTGTTTAGTTCTGGTGGATCGGGTGTTTTCCCACA AGGGATTCCCGTTGGAACCATCATTGAAGAAGGACCAAGGAACGGTTCCTTTAAAACTGCCATCTTACGTCCGTTTGTTG AGTTTGATAACCTATTACATGTAATTGTCTTAAAAAAACTTCCAGAGAAGTGGAGAGAAGAGTGGCCTGCGGAAAAAACA ATCCAAATTGAAGGCCCTTATTTTGGAGAAATTGATTTTCCGAAAGAAAAAGATTATAATAAAAAAGAGAAAGAGAAAAA ACAAGGAAACCAAGGGTTTGGTGGACCAAGTACATTGGGTACGCAAAATCCTGGAAGAACCACTCCGAATGCAAATCCTA GTTCTCCTTCAGAGCCTTCACCCTCTCCATCCCCTTCTCCCCAGACCATGGAAAGTCCAAAAGAGGTGAACCCATGA
Upstream 100 bases:
>100_bases CCGCCCCCACGAGAAACGAGATCCCTCCGAATGAAAAATGAGCTAATTTCGATTCTCGCTTGAAATATTCTTTCCACGAA AATTAATGTGACATAAGTCC
Downstream 100 bases:
>100_bases TTTTAGATAAGGTATTCATCATCATCGGTCTGTTACTTGCTCATTTTCTCAATGGTTCCAATGTGTTTGAACTGGGAAAT GCAATAAGGCCTGATTTTAT
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Rod Shape-Determining Protein; MreC Cell Shape-Determining Protein; Cell Shape Determining Protein
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MKWNRINQNDELFSLLFVFLFSFTSLIWNGNFMVRGIASFQGVGDFFSGSFDSFGSLIKSSYNKLESFERVREERDSCLN VMEEYRQLSKDVERLKAENAILRQELNFPLRIEYPTIRAEVLSVRLNAIYRTIIINKGSESGIKPYMPVVARALDEKGKF TEALVGKIIAVSKGSAVIQPIINSNFSMGVSIPGTNLWASLNGNSGRGTDVLLDYIDSGIVIDPKAIGNFPMGPNPPPTS ANTMFTEGFSKIGKAVFSSGGSGVFPQGIPVGTIIEEGPRNGSFKTAILRPFVEFDNLLHVIVLKKLPEKWREEWPAEKT IQIEGPYFGEIDFPKEKDYNKKEKEKKQGNQGFGGPSTLGTQNPGRTTPNANPSSPSEPSPSPSPSPQTMESPKEVNP
Sequences:
>Translated_398_residues MKWNRINQNDELFSLLFVFLFSFTSLIWNGNFMVRGIASFQGVGDFFSGSFDSFGSLIKSSYNKLESFERVREERDSCLN VMEEYRQLSKDVERLKAENAILRQELNFPLRIEYPTIRAEVLSVRLNAIYRTIIINKGSESGIKPYMPVVARALDEKGKF TEALVGKIIAVSKGSAVIQPIINSNFSMGVSIPGTNLWASLNGNSGRGTDVLLDYIDSGIVIDPKAIGNFPMGPNPPPTS ANTMFTEGFSKIGKAVFSSGGSGVFPQGIPVGTIIEEGPRNGSFKTAILRPFVEFDNLLHVIVLKKLPEKWREEWPAEKT IQIEGPYFGEIDFPKEKDYNKKEKEKKQGNQGFGGPSTLGTQNPGRTTPNANPSSPSEPSPSPSPSPQTMESPKEVNP >Mature_398_residues MKWNRINQNDELFSLLFVFLFSFTSLIWNGNFMVRGIASFQGVGDFFSGSFDSFGSLIKSSYNKLESFERVREERDSCLN VMEEYRQLSKDVERLKAENAILRQELNFPLRIEYPTIRAEVLSVRLNAIYRTIIINKGSESGIKPYMPVVARALDEKGKF TEALVGKIIAVSKGSAVIQPIINSNFSMGVSIPGTNLWASLNGNSGRGTDVLLDYIDSGIVIDPKAIGNFPMGPNPPPTS ANTMFTEGFSKIGKAVFSSGGSGVFPQGIPVGTIIEEGPRNGSFKTAILRPFVEFDNLLHVIVLKKLPEKWREEWPAEKT IQIEGPYFGEIDFPKEKDYNKKEKEKKQGNQGFGGPSTLGTQNPGRTTPNANPSSPSEPSPSPSPSPQTMESPKEVNP
Specific function: Unknown
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43960; Mature: 43960
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWNRINQNDELFSLLFVFLFSFTSLIWNGNFMVRGIASFQGVGDFFSGSFDSFGSLIKS CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCHHHCCCHHHHHHHHHH SYNKLESFERVREERDSCLNVMEEYRQLSKDVERLKAENAILRQELNFPLRIEYPTIRAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH VLSVRLNAIYRTIIINKGSESGIKPYMPVVARALDEKGKFTEALVGKIIAVSKGSAVIQP HHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHH IINSNFSMGVSIPGTNLWASLNGNSGRGTDVLLDYIDSGIVIDPKAIGNFPMGPNPPPTS HHCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHCCCCEECHHHCCCCCCCCCCCCCC ANTMFTEGFSKIGKAVFSSGGSGVFPQGIPVGTIIEEGPRNGSFKTAILRPFVEFDNLLH CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH VIVLKKLPEKWREEWPAEKTIQIEGPYFGEIDFPKEKDYNKKEKEKKQGNQGFGGPSTLG HHHHHHCCHHHHHHCCCCCEEEECCCEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC TQNPGRTTPNANPSSPSEPSPSPSPSPQTMESPKEVNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKWNRINQNDELFSLLFVFLFSFTSLIWNGNFMVRGIASFQGVGDFFSGSFDSFGSLIKS CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCHHHCCCHHHHHHHHHH SYNKLESFERVREERDSCLNVMEEYRQLSKDVERLKAENAILRQELNFPLRIEYPTIRAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH VLSVRLNAIYRTIIINKGSESGIKPYMPVVARALDEKGKFTEALVGKIIAVSKGSAVIQP HHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHH IINSNFSMGVSIPGTNLWASLNGNSGRGTDVLLDYIDSGIVIDPKAIGNFPMGPNPPPTS HHCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHCCCCEECHHHCCCCCCCCCCCCCC ANTMFTEGFSKIGKAVFSSGGSGVFPQGIPVGTIIEEGPRNGSFKTAILRPFVEFDNLLH CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH VIVLKKLPEKWREEWPAEKTIQIEGPYFGEIDFPKEKDYNKKEKEKKQGNQGFGGPSTLG HHHHHHCCHHHHHHCCCCCEEEECCCEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC TQNPGRTTPNANPSSPSEPSPSPSPSPQTMESPKEVNP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA