| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is ygcG [C]
Identifier: 183222333
GI number: 183222333
Start: 3089638
End: 3091308
Strand: Direct
Name: ygcG [C]
Synonym: LEPBI_I2985
Alternate gene names: 183222333
Gene position: 3089638-3091308 (Clockwise)
Preceding gene: 183222332
Following gene: 183222334
Centisome position: 85.83
GC content: 42.01
Gene sequence:
>1671_bases GTGAATCTAGTGAATCGCATGCAATCCCATTCCAATTTCCAGACCACAAGGCAAAACCCAAACCAAAGTCACAAAAGACG CGCTGGAGTTTTCCTCATTGGTCTTGTTTTGATTTTCACTGGATTACTCAATTTACACTGTTCCGAATCCAATGAAGAAT CCCTCGATGCCCTCGTTGCGAAAGTTCCCAATCCAAAAACACTACGCAATAGTTGGGTGGAAGACAGTGCGGGAGTCCTT ACTGACACTTCCGTAATCGACCAAATGATCAATGCAGAAGAAGCCTCATCGGGATTAGAAATCGCAGTGGTCACACTTCC AAGCATTGGAAGTTATGTGCCGAAGGATTTTGCTGTCGCACTTTTTAATTATTGGAAGATCGGAAAAAAGGGAAAGGACA ATGGAATCCTTGTCCTCCACATCATTGACCAAAGGCGTGTGGAAATCGAAATTGGGTATGGCCTGGAAGGTGATCTTCCT GATGCCACAGTCAAACGCATCATCGATACTTACACAATTCCTTCCTTCAAAGCCGACAATTTCCAAAAAGGCCATGCCGA TACTGTGGCCGCTCTCATTGCCAAACTTAAGTCTCCAGAAATCCCTTTGGAAAATTTGGTGACAAATGGAACAGCTAACT TTGATCTAGCGGATACGAGCTCTGACCCAACGAATTCGGATAGTGTCACTGAATTCAAACGTACTGATGTATATGATTAC CAAGGCAAAGCTTATACAAATCTCAGTGCGGAAGAAAAACAAATCTTTGACCAAACAATTGATTTGTATAATACCACGCC CAATTTTTTCTTAAATGACGAAGAATCCAGACTCTTAAATGAAAAATTCGCAGAAGAAGAACGTATTGAAAAAGAAGTAT CGTTTCAATTCAAATCCACATTTGTTTTGGGTTATCTTGGAATTTTTATCTTATTGAACATTCTCCAGCGAATCATTGTT TGGCTCACACCATCTCCTACTGCCAAATACCATATCGTCCACAAAACAGATTTTTTTCTTTATTATGGGCTCGTGGTCAG TCCCCTTGTCCTCATCATCACAGCCCTATCATTATACTTAGGGGAAGCGTTATTCCCTGTTTCGATTTTTCTCATCATTG CAAGTATCGTGGTTTACTTTTTCTTTTTTGGCGACCGCCGTATGCAACAGTTGAGGGCAAGATTGCAAAGTATTCGTAAT ATCCCAAGAACATGCAAACATTGTGGGAACACAATGACCAAACTTTCCGAAGAAGCAGATAACAAACATCTATCGGCAGG TCAGGTTTCGGAAGAAATTGTCAACTCAGTCGATTATGATGTATGGGTATGCCAAAGTTGTAAAAACCATTCGATCTTTA AATTTCGTAATATCAGCCCAGAATACATCTATAAAGGAACGTCCTTTCCGAAAATCAAAGTTTGTCCCGAGTGCAAATTT GAAACCTTCGTATGCAAATCCAGTCGTGTTCTCTCTCCGGCAACTTACAGCAGTTCGGGGGAAGTAGAAGTACGAAGGAA CTGTGCCCATTGCAAACACCATGCAACCGAATATGAAACCATTCCTAAAAAACAAAAAAGTAGTTCTGGCTCCGGTAGTA GTGGTGGCGGAGGGGGCGGAAGTTTTGGCGGTGGATCTTCCGGAGGAGGGGGAAGTGGTGGCAGTTACTAA
Upstream 100 bases:
>100_bases CCCTCTCACTCCAAGGACGATCACTTTTAGTTGTATCTCCCAATGTGGACTGTAACTCATACTTGACAAACCAACAGATT CCTCGTATGTTCTTTAGATC
Downstream 100 bases:
>100_bases GGACAAAATTTCCATTATGAACTACTCAATTCCATACCGTTTGATTCAAATCAAAGATCGTAAAACTCAAATTAGATTGT CATCGAAATGATTCTCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MNLVNRMQSHSNFQTTRQNPNQSHKRRAGVFLIGLVLIFTGLLNLHCSESNEESLDALVAKVPNPKTLRNSWVEDSAGVL TDTSVIDQMINAEEASSGLEIAVVTLPSIGSYVPKDFAVALFNYWKIGKKGKDNGILVLHIIDQRRVEIEIGYGLEGDLP DATVKRIIDTYTIPSFKADNFQKGHADTVAALIAKLKSPEIPLENLVTNGTANFDLADTSSDPTNSDSVTEFKRTDVYDY QGKAYTNLSAEEKQIFDQTIDLYNTTPNFFLNDEESRLLNEKFAEEERIEKEVSFQFKSTFVLGYLGIFILLNILQRIIV WLTPSPTAKYHIVHKTDFFLYYGLVVSPLVLIITALSLYLGEALFPVSIFLIIASIVVYFFFFGDRRMQQLRARLQSIRN IPRTCKHCGNTMTKLSEEADNKHLSAGQVSEEIVNSVDYDVWVCQSCKNHSIFKFRNISPEYIYKGTSFPKIKVCPECKF ETFVCKSSRVLSPATYSSSGEVEVRRNCAHCKHHATEYETIPKKQKSSSGSGSSGGGGGGSFGGGSSGGGGSGGSY
Sequences:
>Translated_556_residues MNLVNRMQSHSNFQTTRQNPNQSHKRRAGVFLIGLVLIFTGLLNLHCSESNEESLDALVAKVPNPKTLRNSWVEDSAGVL TDTSVIDQMINAEEASSGLEIAVVTLPSIGSYVPKDFAVALFNYWKIGKKGKDNGILVLHIIDQRRVEIEIGYGLEGDLP DATVKRIIDTYTIPSFKADNFQKGHADTVAALIAKLKSPEIPLENLVTNGTANFDLADTSSDPTNSDSVTEFKRTDVYDY QGKAYTNLSAEEKQIFDQTIDLYNTTPNFFLNDEESRLLNEKFAEEERIEKEVSFQFKSTFVLGYLGIFILLNILQRIIV WLTPSPTAKYHIVHKTDFFLYYGLVVSPLVLIITALSLYLGEALFPVSIFLIIASIVVYFFFFGDRRMQQLRARLQSIRN IPRTCKHCGNTMTKLSEEADNKHLSAGQVSEEIVNSVDYDVWVCQSCKNHSIFKFRNISPEYIYKGTSFPKIKVCPECKF ETFVCKSSRVLSPATYSSSGEVEVRRNCAHCKHHATEYETIPKKQKSSSGSGSSGGGGGGSFGGGSSGGGGSGGSY >Mature_556_residues MNLVNRMQSHSNFQTTRQNPNQSHKRRAGVFLIGLVLIFTGLLNLHCSESNEESLDALVAKVPNPKTLRNSWVEDSAGVL TDTSVIDQMINAEEASSGLEIAVVTLPSIGSYVPKDFAVALFNYWKIGKKGKDNGILVLHIIDQRRVEIEIGYGLEGDLP DATVKRIIDTYTIPSFKADNFQKGHADTVAALIAKLKSPEIPLENLVTNGTANFDLADTSSDPTNSDSVTEFKRTDVYDY QGKAYTNLSAEEKQIFDQTIDLYNTTPNFFLNDEESRLLNEKFAEEERIEKEVSFQFKSTFVLGYLGIFILLNILQRIIV WLTPSPTAKYHIVHKTDFFLYYGLVVSPLVLIITALSLYLGEALFPVSIFLIIASIVVYFFFFGDRRMQQLRARLQSIRN IPRTCKHCGNTMTKLSEEADNKHLSAGQVSEEIVNSVDYDVWVCQSCKNHSIFKFRNISPEYIYKGTSFPKIKVCPECKF ETFVCKSSRVLSPATYSSSGEVEVRRNCAHCKHHATEYETIPKKQKSSSGSGSSGGGGGGSFGGGSSGGGGSGGSY
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61698; Mature: 61698
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLVNRMQSHSNFQTTRQNPNQSHKRRAGVFLIGLVLIFTGLLNLHCSESNEESLDALVA CCHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHH KVPNPKTLRNSWVEDSAGVLTDTSVIDQMINAEEASSGLEIAVVTLPSIGSYVPKDFAVA CCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHH LFNYWKIGKKGKDNGILVLHIIDQRRVEIEIGYGLEGDLPDATVKRIIDTYTIPSFKADN HHHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCC FQKGHADTVAALIAKLKSPEIPLENLVTNGTANFDLADTSSDPTNSDSVTEFKRTDVYDY CCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHCCCCCC QGKAYTNLSAEEKQIFDQTIDLYNTTPNFFLNDEESRLLNEKFAEEERIEKEVSFQFKST CCCEEECCCHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH FVLGYLGIFILLNILQRIIVWLTPSPTAKYHIVHKTDFFLYYGLVVSPLVLIITALSLYL HHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH GEALFPVSIFLIIASIVVYFFFFGDRRMQQLRARLQSIRNIPRTCKHCGNTMTKLSEEAD HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHC NKHLSAGQVSEEIVNSVDYDVWVCQSCKNHSIFKFRNISPEYIYKGTSFPKIKVCPECKF CCCCCCHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCHHHEECCCCCCEEEECCCCCC ETFVCKSSRVLSPATYSSSGEVEVRRNCAHCKHHATEYETIPKKQKSSSGSGSSGGGGGG CEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHCHHHHHCCCHHCCCCCCCCCCCCCCC SFGGGSSGGGGSGGSY CCCCCCCCCCCCCCCC >Mature Secondary Structure MNLVNRMQSHSNFQTTRQNPNQSHKRRAGVFLIGLVLIFTGLLNLHCSESNEESLDALVA CCHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHH KVPNPKTLRNSWVEDSAGVLTDTSVIDQMINAEEASSGLEIAVVTLPSIGSYVPKDFAVA CCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHH LFNYWKIGKKGKDNGILVLHIIDQRRVEIEIGYGLEGDLPDATVKRIIDTYTIPSFKADN HHHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCC FQKGHADTVAALIAKLKSPEIPLENLVTNGTANFDLADTSSDPTNSDSVTEFKRTDVYDY CCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHCCCCCC QGKAYTNLSAEEKQIFDQTIDLYNTTPNFFLNDEESRLLNEKFAEEERIEKEVSFQFKST CCCEEECCCHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH FVLGYLGIFILLNILQRIIVWLTPSPTAKYHIVHKTDFFLYYGLVVSPLVLIITALSLYL HHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH GEALFPVSIFLIIASIVVYFFFFGDRRMQQLRARLQSIRNIPRTCKHCGNTMTKLSEEAD HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHC NKHLSAGQVSEEIVNSVDYDVWVCQSCKNHSIFKFRNISPEYIYKGTSFPKIKVCPECKF CCCCCCHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCHHHEECCCCCCEEEECCCCCC ETFVCKSSRVLSPATYSSSGEVEVRRNCAHCKHHATEYETIPKKQKSSSGSGSSGGGGGG CEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHCHHHHHCCCHHCCCCCCCCCCCCCCC SFGGGSSGGGGSGGSY CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA