| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222331
Identifier: 183222331
GI number: 183222331
Start: 3087831
End: 3088649
Strand: Direct
Name: 183222331
Synonym: LEPBI_I2983
Alternate gene names: NA
Gene position: 3087831-3088649 (Clockwise)
Preceding gene: 183222330
Following gene: 183222332
Centisome position: 85.78
GC content: 37.97
Gene sequence:
>819_bases ATGAAATCAAATGTAGCAAAGTTCATTTTTTCTTTTTCCTTCCTCATCTTTGCAAATTGTTATTTCAATCCACTCGTCAA TTCCATTGTAAGCCCGGAAAAACCAGAGGAAAACAATTCCTTCCTTGGCCTTTTAGGACTTTCTGGTCCCACACTTTTGA TCACAGGTCAAATCATCGATGCCAATGGGCTGGGGGAAGCAGGCCTTGTTTTGCAACCAGGAAAATCCTTTGCTCCTCAA TCAAAATCAACAAGTTCAGGTTATACAACAGTTGCTGGTGGTAGATTTTATATCCCTTACCAATCAGGGCAGATCTCTTT TACGGTGTATAAAGAGAATTTGTATTATTTTGAATTTACCTTAGACGTAGTAAGCACTAGTCAAATCACCTATAGTTTGT ACGGTGCTGCTCCAGGGATTCAAATCAATGGACTTGGAGCAATCAACATCGCAGATCAAACAAATGTATTTGATTTGGTA AAAGCGTATACAATTGACGGACAATCAAACCAAGTCCCTCTTAATGCAAATGTAAATGTATATATCAGTGCAATGATTTT TGATTTCTCAGAGGCTCCAATTTCTGCATTGGAAACTGGTACTTTAGTAGACGCTTGGATTTCTCAGAACATCAGTCCCT CACCTGCTATTTCCTTTGACAATCTCATGAATGTATCAGACAATACACTTACAATTTATCCAATGGGATTAGGAGGAATG ACGGCTTATGAAATTACTCTTGGATCAGGAATCCTATCTGCAACTGGCAAACCATTAACACCGAGAACGATACAATTTTT CTATCAATTTAATCCTTGA
Upstream 100 bases:
>100_bases ATTTTCTTCTTTCCAAGTGAATCGAAATGAAATAAATTATAGATAGAATTTCTGGACCGCAGGGTGGAAAGGAGATCGTA GTTTTTAGAGGAAGGTAAGT
Downstream 100 bases:
>100_bases TTCTAAACTTAGGATAAACTGTAATTTCTTCAATAGATTCTCCCGTTTTTCCCCTTGACATGATATTTTATTATATTCAA TATTTCCTATATTGAGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MKSNVAKFIFSFSFLIFANCYFNPLVNSIVSPEKPEENNSFLGLLGLSGPTLLITGQIIDANGLGEAGLVLQPGKSFAPQ SKSTSSGYTTVAGGRFYIPYQSGQISFTVYKENLYYFEFTLDVVSTSQITYSLYGAAPGIQINGLGAINIADQTNVFDLV KAYTIDGQSNQVPLNANVNVYISAMIFDFSEAPISALETGTLVDAWISQNISPSPAISFDNLMNVSDNTLTIYPMGLGGM TAYEITLGSGILSATGKPLTPRTIQFFYQFNP
Sequences:
>Translated_272_residues MKSNVAKFIFSFSFLIFANCYFNPLVNSIVSPEKPEENNSFLGLLGLSGPTLLITGQIIDANGLGEAGLVLQPGKSFAPQ SKSTSSGYTTVAGGRFYIPYQSGQISFTVYKENLYYFEFTLDVVSTSQITYSLYGAAPGIQINGLGAINIADQTNVFDLV KAYTIDGQSNQVPLNANVNVYISAMIFDFSEAPISALETGTLVDAWISQNISPSPAISFDNLMNVSDNTLTIYPMGLGGM TAYEITLGSGILSATGKPLTPRTIQFFYQFNP >Mature_272_residues MKSNVAKFIFSFSFLIFANCYFNPLVNSIVSPEKPEENNSFLGLLGLSGPTLLITGQIIDANGLGEAGLVLQPGKSFAPQ SKSTSSGYTTVAGGRFYIPYQSGQISFTVYKENLYYFEFTLDVVSTSQITYSLYGAAPGIQINGLGAINIADQTNVFDLV KAYTIDGQSNQVPLNANVNVYISAMIFDFSEAPISALETGTLVDAWISQNISPSPAISFDNLMNVSDNTLTIYPMGLGGM TAYEITLGSGILSATGKPLTPRTIQFFYQFNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29293; Mature: 29293
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSNVAKFIFSFSFLIFANCYFNPLVNSIVSPEKPEENNSFLGLLGLSGPTLLITGQIID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEEEEE ANGLGEAGLVLQPGKSFAPQSKSTSSGYTTVAGGRFYIPYQSGQISFTVYKENLYYFEFT CCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCEEEEEEECCEEEEEEEECCEEEEEEE LDVVSTSQITYSLYGAAPGIQINGLGAINIADQTNVFDLVKAYTIDGQSNQVPLNANVNV EEEEEECEEEEEEECCCCCEEECCEEEEEECCCCCCEEEEEEEEECCCCCEEEECCCCEE YISAMIFDFSEAPISALETGTLVDAWISQNISPSPAISFDNLMNVSDNTLTIYPMGLGGM EEEEEEEECCCCCCCHHCCCCEEEHHHHCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCC TAYEITLGSGILSATGKPLTPRTIQFFYQFNP EEEEEEECCCEEECCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKSNVAKFIFSFSFLIFANCYFNPLVNSIVSPEKPEENNSFLGLLGLSGPTLLITGQIID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEEEEE ANGLGEAGLVLQPGKSFAPQSKSTSSGYTTVAGGRFYIPYQSGQISFTVYKENLYYFEFT CCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCEEEEEEECCEEEEEEEECCEEEEEEE LDVVSTSQITYSLYGAAPGIQINGLGAINIADQTNVFDLVKAYTIDGQSNQVPLNANVNV EEEEEECEEEEEEECCCCCEEECCEEEEEECCCCCCEEEEEEEEECCCCCEEEECCCCEE YISAMIFDFSEAPISALETGTLVDAWISQNISPSPAISFDNLMNVSDNTLTIYPMGLGGM EEEEEEEECCCCCCCHHCCCCEEEHHHHCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCC TAYEITLGSGILSATGKPLTPRTIQFFYQFNP EEEEEEECCCEEECCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA