| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183222321
Identifier: 183222321
GI number: 183222321
Start: 3076756
End: 3077262
Strand: Direct
Name: 183222321
Synonym: LEPBI_I2973
Alternate gene names: NA
Gene position: 3076756-3077262 (Clockwise)
Preceding gene: 183222313
Following gene: 183222322
Centisome position: 85.47
GC content: 38.07
Gene sequence:
>507_bases ATGAAAAAAATATTTAAAACAGCTCTTGTCGGGTTATTGTCATTTGGTCTTCTTTCCAATTGTTTTGGAAAATTCGGTGC CATCAAAGCAGTGTATTCCTTTAATGCAGGAATTCAAATTGGATCAGGAAAACTTGCGAGTTTCTTTCGTTCCTTATTGA TGATTTTCCCATTGTACATTGCCTATGGAATCGGAAGTTTTTTAGACATTCTGATTTTCAACTTAATTGAATTCTGGACT GACCGAAACCCAATCGCGATGGCAGAGTATGACTTTGATGGAAAACTTGTGAAAGAATACTCTGAAAATGGCCAGACCAT CACTCTCACTTACACTGAATGGGGTAAGGTATTAAGAATGGATGCTCCCACTGCGAAAGGAATGGAGTCTGTTTATTTCT TAAAAGACAAACCAGAAAAAGCATACCGACTCATCAACGGAAAGTATGTTGAAATCCAACAAGTCAGTGGACCAATCCTC CCTCCAATGACTGCAAAACACATCTAA
Upstream 100 bases:
>100_bases ATCGAAAAAATGCCGCTGTCAATCATTTCGACTTGCAGAACCCAATCATTTCACTTATGATTGGTCACTAGTTTTCAACT AAAAAATGTAGAGGTAGAAA
Downstream 100 bases:
>100_bases GACCTATATTGCCCCTAATTTTAGGGGCAATCCTTTGCCGATACTCTAATTATGAAACGTGCTCATTTAATCATATTCCT TTTGTTTTTTGTTTGGAAGT
Product: putative signal peptide
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKKIFKTALVGLLSFGLLSNCFGKFGAIKAVYSFNAGIQIGSGKLASFFRSLLMIFPLYIAYGIGSFLDILIFNLIEFWT DRNPIAMAEYDFDGKLVKEYSENGQTITLTYTEWGKVLRMDAPTAKGMESVYFLKDKPEKAYRLINGKYVEIQQVSGPIL PPMTAKHI
Sequences:
>Translated_168_residues MKKIFKTALVGLLSFGLLSNCFGKFGAIKAVYSFNAGIQIGSGKLASFFRSLLMIFPLYIAYGIGSFLDILIFNLIEFWT DRNPIAMAEYDFDGKLVKEYSENGQTITLTYTEWGKVLRMDAPTAKGMESVYFLKDKPEKAYRLINGKYVEIQQVSGPIL PPMTAKHI >Mature_168_residues MKKIFKTALVGLLSFGLLSNCFGKFGAIKAVYSFNAGIQIGSGKLASFFRSLLMIFPLYIAYGIGSFLDILIFNLIEFWT DRNPIAMAEYDFDGKLVKEYSENGQTITLTYTEWGKVLRMDAPTAKGMESVYFLKDKPEKAYRLINGKYVEIQQVSGPIL PPMTAKHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18877; Mature: 18877
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFKTALVGLLSFGLLSNCFGKFGAIKAVYSFNAGIQIGSGKLASFFRSLLMIFPLYI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCHHHHHHHHHHHHHHHHH AYGIGSFLDILIFNLIEFWTDRNPIAMAEYDFDGKLVKEYSENGQTITLTYTEWGKVLRM HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCEEEEEEECCCCEEEE DAPTAKGMESVYFLKDKPEKAYRLINGKYVEIQQVSGPILPPMTAKHI CCCCCCCCCEEEEECCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MKKIFKTALVGLLSFGLLSNCFGKFGAIKAVYSFNAGIQIGSGKLASFFRSLLMIFPLYI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCHHHHHHHHHHHHHHHHH AYGIGSFLDILIFNLIEFWTDRNPIAMAEYDFDGKLVKEYSENGQTITLTYTEWGKVLRM HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCEEEEEEECCCCEEEE DAPTAKGMESVYFLKDKPEKAYRLINGKYVEIQQVSGPILPPMTAKHI CCCCCCCCCEEEEECCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA