| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222297
Identifier: 183222297
GI number: 183222297
Start: 3052301
End: 3054304
Strand: Direct
Name: 183222297
Synonym: LEPBI_I2949
Alternate gene names: NA
Gene position: 3052301-3054304 (Clockwise)
Preceding gene: 183222296
Following gene: 183222298
Centisome position: 84.79
GC content: 30.24
Gene sequence:
>2004_bases ATGAAATCCTTACCCTTCAATCGTATCCTTATATTTTGTTTATTTTTCCTTTCTCTAAATTGTTCTCGTACAACAGATGA AAATACCGTAGTACTTAGATTAGATGGAGAAGACTGGGGAATTTACTTCAATGATAATGCCGATTTATTAAATCCTGAAT TTAATCCAAATAATCTAGATATAATCGTTGTTCCCAATAATTTTAGAAACCTTAACAAATCATATCGAGGATCCATTTGG ATTCGAAAAAGTTTTGAAATCACAACAGAACAACACCAAAAATCCTTAGCGCTGCAACTAGGAAAAGTTTACCAATCCGA TGAAGTTTTTGTAAATGGCGTGCTCATTGGAAAAAACAATTCCGCTTTTGGAAAAGACCCAGAAGAGTATGCATTTGGTA GACCTCGCATTTACCCGATTCCTCACGATTTGTTGCTCGAAGGTGAAAATGTTCTTATCATCAAAATTGATTCTGCATTA TCAACATCAGCTGGGATCATCACAGGTCCGATACGAATTGTTACATATGAAGAAGCAATCAATGGGAATCTATATGATTC ACTTGTTGAATTGATATTCGTTGGATTTTATCTATTCATCGCATTGTTTTTCTTTATCAATTTCTTTAATTTGAGAGATA AAAAAGAATATTTGAGCTTTAGTATTTTGGCTTTAATATTTTCTGGTTACGAACTTTGCAAAAACGAAGTTCGATTTTTA ATTTTGAATCATTTTGCAATTTTAAAATTTTTGGAATATTCTTTTTTATTCATCCTTCCCTATGGTTTTATAAAATTCAT ACAAGATTTTTTCGAGTTAAAACCTTTCAGATACCAAAGAATTTATCTTTTATTACAATTTTTCTTTATCGCTGTTTTTC TCATCATTCAAAACCCCGTTTTTTGGTACAACTTTATCGGTTATTGGGATATCCATTTACTCGCAGTAATTGGTTATGCT ATCTACGTAACGATCATTAAATTTCGTGAACAAAAAAGAGGTTCAACAATCCATTTATTGGCACTTGTATACCTTCTGTA TTCAATTCTCAAAGAAATATTAATTGAACGAGGTTATTTAAATTCACCTTCTTCTCTTGAAACTAGTTTTTTAGTATATT TGATTTTAATGACTCTTGCTCTTCGATTTCAGTTTTTAATGATGAAACGAAAACTACAAAATCGATATGAGAGACTAAAA GAAGCAGATTCTCTCAGAGAAAAAATATTCTTTTATATGGATGCGATGATATCGGGTCCGTTAAAATTGATGAAAGAAAA ACTTTCTGCATACAGAGAGTCTACACAAAAAACGAAAGATAAAAACCTAGTGAAAGAAGTAACCGATGTTCAATCTTCCA TTGACAATGTGATGGATGATATCATTGAACTTTCAAGATTAGAAGTTTTAAAAGAAGTTCCATTCAAAGAGCAAGTTAAT TTTATTTCTTTTATCAACGATGTGATTCCAGAAGATGATATCACTTATTCTATCAAAGTAAATCCTGAAACAGAAATTTA TAATAGTTTGGACCTAATCAACTCTGTTGTAGTAAGACTTGTCGATTTCCCGCCATTCAAAGAGTTCAATCATAATGATT TGATCATTACGCAAGATTTAAAAGGAAATGTGCATTTCCGATTTTTATTATTTCATAACAATTCAAAAGTTGCACAAAAA CTATTCAATGAACTGACCGAAAATTATAACCAACTCACTCCAATTAAAGTAAAATGGGCGATTATATTAGAAATCGTAAG ATTGTTAGGTGCTAAAATTGATTTCAAAATCATCAAGAAAAAATATTTAAAAATAGATTTAGGAATTGCTGCCATTGTAC CAATCTCAGAATTACAACCAATCAAAGATTCTAATGGTATACCAAACGCAAATCTAAACACCAAAAAATCAGAAAAAGAA GATTGGAGAGTCACCTTAAAACGAATTTTTAAGTTTCTGAAAGAAACAGAAATTAAAATCCCAAACTTTAAAAAGAAAAA GTAA
Upstream 100 bases:
>100_bases TTGAGGCATCAACAAACTTCTTATCAGGAACTGTAAGTTTAAAATCAAGCGAAGGAATGGGAGCAAAGTTCACGATCCGA ATCCCAGAGAAACCAAAAAA
Downstream 100 bases:
>100_bases AGAATACAACTGAATCAATGATCATTAAATACCTTACCAAACAAAGTCCAGAATCACTTCTAAAAGCATTTGAGGCTTGT AAAGAATTAACGTTTGATAA
Product: putative signal peptide
Products: NA
Alternate protein names: GGDEF Domain Protein
Number of amino acids: Translated: 667; Mature: 667
Protein sequence:
>667_residues MKSLPFNRILIFCLFFLSLNCSRTTDENTVVLRLDGEDWGIYFNDNADLLNPEFNPNNLDIIVVPNNFRNLNKSYRGSIW IRKSFEITTEQHQKSLALQLGKVYQSDEVFVNGVLIGKNNSAFGKDPEEYAFGRPRIYPIPHDLLLEGENVLIIKIDSAL STSAGIITGPIRIVTYEEAINGNLYDSLVELIFVGFYLFIALFFFINFFNLRDKKEYLSFSILALIFSGYELCKNEVRFL ILNHFAILKFLEYSFLFILPYGFIKFIQDFFELKPFRYQRIYLLLQFFFIAVFLIIQNPVFWYNFIGYWDIHLLAVIGYA IYVTIIKFREQKRGSTIHLLALVYLLYSILKEILIERGYLNSPSSLETSFLVYLILMTLALRFQFLMMKRKLQNRYERLK EADSLREKIFFYMDAMISGPLKLMKEKLSAYRESTQKTKDKNLVKEVTDVQSSIDNVMDDIIELSRLEVLKEVPFKEQVN FISFINDVIPEDDITYSIKVNPETEIYNSLDLINSVVVRLVDFPPFKEFNHNDLIITQDLKGNVHFRFLLFHNNSKVAQK LFNELTENYNQLTPIKVKWAIILEIVRLLGAKIDFKIIKKKYLKIDLGIAAIVPISELQPIKDSNGIPNANLNTKKSEKE DWRVTLKRIFKFLKETEIKIPNFKKKK
Sequences:
>Translated_667_residues MKSLPFNRILIFCLFFLSLNCSRTTDENTVVLRLDGEDWGIYFNDNADLLNPEFNPNNLDIIVVPNNFRNLNKSYRGSIW IRKSFEITTEQHQKSLALQLGKVYQSDEVFVNGVLIGKNNSAFGKDPEEYAFGRPRIYPIPHDLLLEGENVLIIKIDSAL STSAGIITGPIRIVTYEEAINGNLYDSLVELIFVGFYLFIALFFFINFFNLRDKKEYLSFSILALIFSGYELCKNEVRFL ILNHFAILKFLEYSFLFILPYGFIKFIQDFFELKPFRYQRIYLLLQFFFIAVFLIIQNPVFWYNFIGYWDIHLLAVIGYA IYVTIIKFREQKRGSTIHLLALVYLLYSILKEILIERGYLNSPSSLETSFLVYLILMTLALRFQFLMMKRKLQNRYERLK EADSLREKIFFYMDAMISGPLKLMKEKLSAYRESTQKTKDKNLVKEVTDVQSSIDNVMDDIIELSRLEVLKEVPFKEQVN FISFINDVIPEDDITYSIKVNPETEIYNSLDLINSVVVRLVDFPPFKEFNHNDLIITQDLKGNVHFRFLLFHNNSKVAQK LFNELTENYNQLTPIKVKWAIILEIVRLLGAKIDFKIIKKKYLKIDLGIAAIVPISELQPIKDSNGIPNANLNTKKSEKE DWRVTLKRIFKFLKETEIKIPNFKKKK >Mature_667_residues MKSLPFNRILIFCLFFLSLNCSRTTDENTVVLRLDGEDWGIYFNDNADLLNPEFNPNNLDIIVVPNNFRNLNKSYRGSIW IRKSFEITTEQHQKSLALQLGKVYQSDEVFVNGVLIGKNNSAFGKDPEEYAFGRPRIYPIPHDLLLEGENVLIIKIDSAL STSAGIITGPIRIVTYEEAINGNLYDSLVELIFVGFYLFIALFFFINFFNLRDKKEYLSFSILALIFSGYELCKNEVRFL ILNHFAILKFLEYSFLFILPYGFIKFIQDFFELKPFRYQRIYLLLQFFFIAVFLIIQNPVFWYNFIGYWDIHLLAVIGYA IYVTIIKFREQKRGSTIHLLALVYLLYSILKEILIERGYLNSPSSLETSFLVYLILMTLALRFQFLMMKRKLQNRYERLK EADSLREKIFFYMDAMISGPLKLMKEKLSAYRESTQKTKDKNLVKEVTDVQSSIDNVMDDIIELSRLEVLKEVPFKEQVN FISFINDVIPEDDITYSIKVNPETEIYNSLDLINSVVVRLVDFPPFKEFNHNDLIITQDLKGNVHFRFLLFHNNSKVAQK LFNELTENYNQLTPIKVKWAIILEIVRLLGAKIDFKIIKKKYLKIDLGIAAIVPISELQPIKDSNGIPNANLNTKKSEKE DWRVTLKRIFKFLKETEIKIPNFKKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78196; Mature: 78196
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLPFNRILIFCLFFLSLNCSRTTDENTVVLRLDGEDWGIYFNDNADLLNPEFNPNNLD CCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCEE IIVVPNNFRNLNKSYRGSIWIRKSFEITTEQHQKSLALQLGKVYQSDEVFVNGVLIGKNN EEEECCCHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCC SAFGKDPEEYAFGRPRIYPIPHDLLLEGENVLIIKIDSALSTSAGIITGPIRIVTYEEAI CCCCCCHHHHCCCCCEEEECCHHHEECCCCEEEEEECCCCCCCCCEEECCEEEEEEHHHH NGNLYDSLVELIFVGFYLFIALFFFINFFNLRDKKEYLSFSILALIFSGYELCKNEVRFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ILNHFAILKFLEYSFLFILPYGFIKFIQDFFELKPFRYQRIYLLLQFFFIAVFLIIQNPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCH FWYNFIGYWDIHLLAVIGYAIYVTIIKFREQKRGSTIHLLALVYLLYSILKEILIERGYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCC NSPSSLETSFLVYLILMTLALRFQFLMMKRKLQNRYERLKEADSLREKIFFYMDAMISGP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH LKLMKEKLSAYRESTQKTKDKNLVKEVTDVQSSIDNVMDDIIELSRLEVLKEVPFKEQVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FISFINDVIPEDDITYSIKVNPETEIYNSLDLINSVVVRLVDFPPFKEFNHNDLIITQDL HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECC KGNVHFRFLLFHNNSKVAQKLFNELTENYNQLTPIKVKWAIILEIVRLLGAKIDFKIIKK CCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHH KYLKIDLGIAAIVPISELQPIKDSNGIPNANLNTKKSEKEDWRVTLKRIFKFLKETEIKI HHHEEEECCEEECCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC PNFKKKK CCCCCCC >Mature Secondary Structure MKSLPFNRILIFCLFFLSLNCSRTTDENTVVLRLDGEDWGIYFNDNADLLNPEFNPNNLD CCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCEE IIVVPNNFRNLNKSYRGSIWIRKSFEITTEQHQKSLALQLGKVYQSDEVFVNGVLIGKNN EEEECCCHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCC SAFGKDPEEYAFGRPRIYPIPHDLLLEGENVLIIKIDSALSTSAGIITGPIRIVTYEEAI CCCCCCHHHHCCCCCEEEECCHHHEECCCCEEEEEECCCCCCCCCEEECCEEEEEEHHHH NGNLYDSLVELIFVGFYLFIALFFFINFFNLRDKKEYLSFSILALIFSGYELCKNEVRFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ILNHFAILKFLEYSFLFILPYGFIKFIQDFFELKPFRYQRIYLLLQFFFIAVFLIIQNPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCH FWYNFIGYWDIHLLAVIGYAIYVTIIKFREQKRGSTIHLLALVYLLYSILKEILIERGYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCC NSPSSLETSFLVYLILMTLALRFQFLMMKRKLQNRYERLKEADSLREKIFFYMDAMISGP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH LKLMKEKLSAYRESTQKTKDKNLVKEVTDVQSSIDNVMDDIIELSRLEVLKEVPFKEQVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FISFINDVIPEDDITYSIKVNPETEIYNSLDLINSVVVRLVDFPPFKEFNHNDLIITQDL HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECC KGNVHFRFLLFHNNSKVAQKLFNELTENYNQLTPIKVKWAIILEIVRLLGAKIDFKIIKK CCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHH KYLKIDLGIAAIVPISELQPIKDSNGIPNANLNTKKSEKEDWRVTLKRIFKFLKETEIKI HHHEEEECCEEECCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC PNFKKKK CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA